RNA–Protein interactions for RNA: ENST00000606347.1

UCHL3-204, Transcript of ubiquitin C-terminal hydrolase L3, human

TSL 2

Gene UCHL3, Length 722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UCHL3-204	ENST00000606347	CMTR2	Q8IYT2	770 aa	Known RBP	4.99	□□□□□ -1.61
UCHL3-204	ENST00000606347	FAM98A	Q8NCA5	519 aa	Known RBP	4.99	□□□□□ -1.61
UCHL3-204	ENST00000606347	SIMC1	Q8NDZ2	872 aa		4.99	□□□□□ -1.61
UCHL3-204	ENST00000606347	GCDH	Q92947	438 aa	Predicted RBP	4.99	□□□□□ -1.61
UCHL3-204	ENST00000606347	LPP	Q93052	612 aa		4.99	□□□□□ -1.61
UCHL3-204	ENST00000606347	CAVIN3	Q969G5	261 aa		4.99	□□□□□ -1.61
UCHL3-204	ENST00000606347	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.99	□□□□□ -1.61
UCHL3-204	ENST00000606347	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.99	□□□□□ -1.61
UCHL3-204	ENST00000606347	GBP4	Q96PP9	640 aa		4.99	□□□□□ -1.61
UCHL3-204	ENST00000606347	SFMBT1	Q9UHJ3	866 aa		4.99	□□□□□ -1.61
UCHL3-204	ENST00000606347	GOLGA6L22	H0YM25	854 aa		4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	FOXP2	O15409	715 aa		4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	IPO13	O94829	963 aa	Known RBP	4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	ZBTB48	P10074	688 aa	Predicted RBP	4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	AVPR1B	P47901	424 aa		4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	ZNF81	P51508	661 aa		4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	RBL2	Q08999	1139 aa		4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	KLHDC10	Q6PID8	442 aa		4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	BRAP	Q7Z569	592 aa		4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	DNAJC7	Q99615	494 aa		4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	IL23A	Q9NPF7	189 aa		4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	RCAN3	Q9UKA8	241 aa		4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	VWA7	Q9Y334	891 aa		4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	ASB1	Q9Y576	335 aa		4.98	□□□□□ -1.61
UCHL3-204	ENST00000606347	TCRBV16S1A1N1	A0A5B0	115 aa		4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	KCNQ2	O43526	872 aa		4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	EFCAB14	O75071	495 aa		4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	MAF	O75444	373 aa	Predicted RBP	4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	RECQL4	O94761	1208 aa		4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	ADAM8	P78325	824 aa		4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	MFSD5	Q6N075	450 aa		4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	CCDC62	Q6P9F0	684 aa		4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	MDGA1	Q8NFP4	955 aa		4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	TRIM39	Q9HCM9	518 aa		4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.97	□□□□□ -1.61
UCHL3-204	ENST00000606347	SLC12A8	A0AV02	714 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	C2orf78	A6NCI8	922 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347		E9PSI1	815 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	H2AFY	O75367	372 aa	Known RBP	4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	GYPE	P15421	78 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	HK1	P19367	917 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	TCIRG1	Q13488	830 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	TMEM177	Q53S58	311 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	OTOP1	Q7RTM1	612 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	HIPK4	Q8NE63	616 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	ARL8A	Q96BM9	186 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	MYEOV	Q96EZ4	313 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	ZNF778	Q96MU6	729 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	C8orf37	Q96NL8	207 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	SYBU	Q9NX95	663 aa		4.96	□□□□□ -1.62
UCHL3-204	ENST00000606347	DVL2	O14641	736 aa		4.95	□□□□□ -1.62
UCHL3-204	ENST00000606347	MECP2	P51608	486 aa	Known RBP	4.95	□□□□□ -1.62
UCHL3-204	ENST00000606347	ALDH6A1	Q02252	535 aa	Known RBP	4.95	□□□□□ -1.62
UCHL3-204	ENST00000606347	TMEM132B	Q14DG7	1078 aa		4.95	□□□□□ -1.62
UCHL3-204	ENST00000606347	NAIF1	Q69YI7	327 aa	Predicted RBP	4.95	□□□□□ -1.62
UCHL3-204	ENST00000606347	IGSF22	Q8N9C0	903 aa		4.95	□□□□□ -1.62
UCHL3-204	ENST00000606347	ANKS1A	Q92625	1134 aa		4.95	□□□□□ -1.62
UCHL3-204	ENST00000606347	ARMC5	Q96C12	935 aa		4.95	□□□□□ -1.62
UCHL3-204	ENST00000606347	ZNF512	Q96ME7	567 aa	Predicted RBP	4.95	□□□□□ -1.62
UCHL3-204	ENST00000606347	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.95	□□□□□ -1.62
UCHL3-204	ENST00000606347	MRPL4	Q9BYD3	311 aa	Known RBP	4.95	□□□□□ -1.62
UCHL3-204	ENST00000606347	MAGEL2	Q9UJ55	1249 aa		4.95	□□□□□ -1.62
UCHL3-204	ENST00000606347	TRIM24	O15164	1050 aa		4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	RBMXL2	O75526	392 aa	Known RBP	4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	ZFPL1	O95159	310 aa		4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	APEX1	P27695	318 aa	Known RBP	4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	PTTG1IP	P53801	180 aa		4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	SEC24C	P53992	1094 aa		4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	SESN2	P58004	480 aa	Predicted RBP	4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	IRF9	Q00978	393 aa		4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	MAP3K12	Q12852	859 aa		4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	FOXI1	Q12951	378 aa		4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	C1QL2	Q7Z5L3	287 aa		4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	ST8SIA2	Q92186	375 aa		4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	NCDN	Q9UBB6	729 aa		4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	EIF2B4	Q9UI10	523 aa	Known RBP	4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	PTCH2	Q9Y6C5	1203 aa		4.94	□□□□□ -1.62
UCHL3-204	ENST00000606347	NPTXR	O95502	500 aa		4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	GNAT2	P19087	354 aa		4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	ANTXR2	P58335	489 aa		4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	FAM189B	P81408	668 aa		4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	C2orf27A	Q580R0	203 aa		4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	KRT40	Q6A162	431 aa		4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	LILRB2	Q8N423	598 aa		4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	ZSWIM2	Q8NEG5	633 aa		4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	ZNF384	Q8TF68	577 aa		4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	ERCC4	Q92889	916 aa	Predicted RBP	4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	GFM2	Q969S9	779 aa	Known RBP	4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	CLUHP3	Q96NS8	147 aa		4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	SRPK1	Q96SB4	655 aa	Known RBP	4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	FOXB1	Q99853	325 aa		4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	NCOA5	Q9HCD5	579 aa	Known RBP	4.93	□□□□□ -1.62
UCHL3-204	ENST00000606347	AHRR	A9YTQ3	701 aa		4.92	□□□□□ -1.62
UCHL3-204	ENST00000606347	PRL	P01236	227 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms