RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 GDPD2Q9HCC8 539 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
CTSA-211ENST00000606066 CXXC1Q9P0U4 656 aaPredicted RBP15.78■□□□□ 0.12
CTSA-211ENST00000606066 MSRAQ9UJ68 235 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 KCNH3Q9ULD8 1083 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 ODF2LQ9ULJ1 636 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 WDR81Q562E7 1941 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 A0A1W2PQ27 194 aa15.77■□□□□ 0.12
CTSA-211ENST00000606066 A0A1W2PQ64 194 aa15.77■□□□□ 0.12
CTSA-211ENST00000606066 A0A1W2PQD8 194 aa15.77■□□□□ 0.12
CTSA-211ENST00000606066 DENND3A2RUS2 1198 aa15.77■□□□□ 0.12
CTSA-211ENST00000606066 POLR2DO15514 142 aaKnown RBP15.77■□□□□ 0.12
CTSA-211ENST00000606066 ATP2A2P16615 1042 aaKnown RBP15.77■□□□□ 0.12
CTSA-211ENST00000606066 WDR5P61964 334 aaKnown RBP15.77■□□□□ 0.12
CTSA-211ENST00000606066 AMPD3Q01432 767 aa15.77■□□□□ 0.12
CTSA-211ENST00000606066 DMP1Q13316 513 aaPredicted RBP15.77■□□□□ 0.12
CTSA-211ENST00000606066 NAALADL2Q58DX5 795 aa15.77■□□□□ 0.12
CTSA-211ENST00000606066 ARSHQ5FYA8 562 aa15.77■□□□□ 0.12
CTSA-211ENST00000606066 CATSPER4Q7RTX7 472 aa15.77■□□□□ 0.12
CTSA-211ENST00000606066 LRRC15Q8TF66 581 aa15.77■□□□□ 0.12
CTSA-211ENST00000606066 DHX58Q96C10 678 aa15.77■□□□□ 0.12
CTSA-211ENST00000606066 MAGEF1Q9HAY2 307 aa15.77■□□□□ 0.12
CTSA-211ENST00000606066 CHST12Q9NRB3 414 aa15.77■□□□□ 0.12
CTSA-211ENST00000606066 LARSQ9P2J5 1176 aaKnown RBP15.77■□□□□ 0.12
CTSA-211ENST00000606066 CHD7Q9P2D1 2997 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 NCOR1O75376 2440 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 PHLPP2Q6ZVD8 1323 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 A0A087X0B3 334 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 INO80B-WBP1J3KQ70 363 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 ENPP3O14638 875 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 TBCAO75347 108 aaKnown RBP15.76■□□□□ 0.11
CTSA-211ENST00000606066 ERLIN2O94905 339 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 EFNA5P52803 228 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 SMTNP53814 917 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 RAD51AP2Q09MP3 1159 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 ADGRE1Q14246 886 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 TCTN1Q2MV58 587 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 TSPYL2Q9H2G4 693 aaPredicted RBP15.76■□□□□ 0.11
CTSA-211ENST00000606066 TNMDQ9H2S6 317 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 TMX1Q9H3N1 280 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 PRDM12Q9H4Q4 367 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 C1orf112Q9NSG2 853 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 DACT1Q9NYF0 836 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 MYH15Q9Y2K3 1946 aa15.76■□□□□ 0.11
CTSA-211ENST00000606066 A0A1B0GVL5 298 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 CCDC169A6NNP5 214 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 CSDE1O75534 798 aaKnown RBP15.75■□□□□ 0.11
CTSA-211ENST00000606066 FAM13AO94988 1023 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 PLS3P13797 630 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 FGFR4P22455 802 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 AXLP30530 894 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 PEX3P56589 373 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 MRPS5P82675 430 aaKnown RBP15.75■□□□□ 0.11
CTSA-211ENST00000606066 E2F4Q16254 413 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 CDCA2Q69YH5 1023 aaPredicted RBP15.75■□□□□ 0.11
CTSA-211ENST00000606066 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.75■□□□□ 0.11
CTSA-211ENST00000606066 CEP57L1Q8IYX8 460 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 MYOCDQ8IZQ8 938 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 DAW1Q8N136 415 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 BSNDQ8WZ55 320 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 MRPS27Q92552 414 aaKnown RBP15.75■□□□□ 0.11
CTSA-211ENST00000606066 ADAM2Q99965 735 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 REEP2Q9BRK0 252 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 NTPCRQ9BSD7 190 aaKnown RBP15.75■□□□□ 0.11
CTSA-211ENST00000606066 PARVGQ9HBI0 331 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 POLD4Q9HCU8 107 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 KMT5AQ9NQR1 393 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 RGS18Q9NS28 235 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 PRMT7Q9NVM4 692 aaPredicted RBP15.75■□□□□ 0.11
CTSA-211ENST00000606066 USP25Q9UHP3 1055 aa15.75■□□□□ 0.11
CTSA-211ENST00000606066 NPHP3-ACAD11A0A0J9YXS1 232 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 FAM237AA0A1B0GTK4 181 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.74■□□□□ 0.11
CTSA-211ENST00000606066 SFI1A8K8P3 1242 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 H0YCG3 227 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 PFKFB1P16118 471 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 SCP2P22307 547 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 SYKP43405 635 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 NPTX2P47972 431 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 MBTD1Q05BQ5 628 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 MAPK7Q13164 816 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 GIT2Q14161 759 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 MAPK6Q16659 721 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 SLC24A5Q71RS6 500 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 HERC6Q8IVU3 1022 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 FSIP1Q8NA03 581 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 SPIRE2Q8WWL2 714 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 DDX12PQ92771 950 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 TOP1MTQ969P6 601 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 PRIMPOLQ96LW4 560 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 ZBED2Q9BTP6 218 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 ZHX3Q9H4I2 956 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 MINDY3Q9H8M7 445 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 SLC28A3Q9HAS3 691 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 AGPAT5Q9NUQ2 364 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 KBTBD4Q9NVX7 518 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 THEGQ9P2T0 379 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 PIN4Q9Y237 131 aaKnown RBP15.74■□□□□ 0.11
CTSA-211ENST00000606066 HPSEQ9Y251 543 aa15.74■□□□□ 0.11
CTSA-211ENST00000606066 XIRP2A4UGR9 3374 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms