RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 RAB27AP51159 221 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 ADAM15Q13444 863 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 RABEP1Q15276 862 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 PLPP4Q5VZY2 271 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 NOSTRINQ8IVI9 506 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 EFHBQ8N7U6 833 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 MRPS27Q92552 414 aaKnown RBP18.24■□□□□ 0.51
TUBE1-206ENST00000603722 ENTPD7Q9NQZ7 604 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 PUF60Q9UHX1 559 aaKnown RBP18.24■□□□□ 0.51
TUBE1-206ENST00000603722 LZTS1Q9Y250 596 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 INPP5FQ9Y2H2 1132 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 FSCN2O14926 492 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 PER2O15055 1255 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 ASAP2O43150 1006 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 USO1O60763 962 aaKnown RBP18.23■□□□□ 0.51
TUBE1-206ENST00000603722 DGAT1O75907 488 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 SSTR3P32745 418 aaPredicted RBP18.23■□□□□ 0.51
TUBE1-206ENST00000603722 TECP42680 631 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 ORC2Q13416 577 aaPredicted RBP18.23■□□□□ 0.51
TUBE1-206ENST00000603722 NBR1Q14596 966 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 TTC38Q5R3I4 469 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 GLB1LQ6UWU2 654 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 GJD3Q8N144 294 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 ASAP3Q8TDY4 903 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 KHSRPQ92945 711 aaKnown RBP eCLIP18.23■□□□□ 0.51
TUBE1-206ENST00000603722 TCF25Q9BQ70 676 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 TLE6Q9H808 572 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 SPG21Q9NZD8 308 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 CD207Q9UJ71 328 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 PCDHB2Q9Y5E7 798 aa18.23■□□□□ 0.51
TUBE1-206ENST00000603722 LOXHD1Q8IVV2 1947 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 KIAA1671Q9BY89 1806 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 MBTPS2O43462 519 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 ST18O60284 1047 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 ZC3H11AO75152 810 aaKnown RBP eCLIP18.22■□□□□ 0.51
TUBE1-206ENST00000603722 MED24O75448 989 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 ERLIN2O94905 339 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 GLP2RO95838 553 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 SPATA31C1P0DKV0 1188 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 HOXA11P31270 313 aaPredicted RBP18.22■□□□□ 0.51
TUBE1-206ENST00000603722 KRT17Q04695 432 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 SMAD4Q13485 552 aaKnown RBP18.22■□□□□ 0.51
TUBE1-206ENST00000603722 CAPSQ13938 189 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 TFDP1Q14186 410 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 MXD4Q14582 209 aaPredicted RBP18.22■□□□□ 0.51
TUBE1-206ENST00000603722 CATSPER3Q86XQ3 398 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 SLC39A11Q8N1S5 342 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 PGBD4Q96DM1 585 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 EPHX3Q9H6B9 360 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 UPF2Q9HAU5 1272 aaKnown RBP18.22■□□□□ 0.51
TUBE1-206ENST00000603722 TUFT1Q9NNX1 390 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 CLEC1BQ9P126 229 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 BARX2Q9UMQ3 279 aaPredicted RBP18.22■□□□□ 0.51
TUBE1-206ENST00000603722 NOL7Q9UMY1 257 aaKnown RBP18.22■□□□□ 0.51
TUBE1-206ENST00000603722 EVPLQ92817 2033 aa18.22■□□□□ 0.51
TUBE1-206ENST00000603722 NT5C1B-RDH14C9J2C7 533 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 TSPAN1O60635 241 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 ZNF623O75123 536 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 ARL2P36404 184 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 BCAR1P56945 870 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 PTENP60484 403 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 RBM10P98175 930 aaKnown RBP18.21■□□□□ 0.51
TUBE1-206ENST00000603722 NOMO2Q5JPE7 1267 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 UBXN11Q5T124 520 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 PDE12Q6L8Q7 609 aaKnown RBP18.21■□□□□ 0.51
TUBE1-206ENST00000603722 POTEGQ6S5H5 508 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 MAEAQ7L5Y9 396 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 ERMNQ8TAM6 284 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 RSPH1Q8WYR4 309 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 MSLNLQ96KJ4 702 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 POLR3FQ9H1D9 316 aaPredicted RBP18.21■□□□□ 0.51
TUBE1-206ENST00000603722 TBC1D13Q9NVG8 400 aa18.21■□□□□ 0.51
TUBE1-206ENST00000603722 HIDE1A8MVS5 230 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 INO80B-WBP1J3KQ70 363 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 OFD1O75665 1012 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 GLRA2P23416 452 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 TRAPPC10P48553 1259 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 ALDH7A1P49419 539 aaKnown RBP18.2■□□□□ 0.5
TUBE1-206ENST00000603722 RNASELQ05823 741 aaKnown RBP18.2■□□□□ 0.5
TUBE1-206ENST00000603722 ZP2Q05996 745 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 MBTD1Q05BQ5 628 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 SMAD2Q15796 467 aaKnown RBP18.2■□□□□ 0.5
TUBE1-206ENST00000603722 DUSP6Q16828 381 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 AGMOQ6ZNB7 445 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 TMC7Q7Z402 723 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 VN1R2Q8NFZ6 395 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 CDCA3Q99618 268 aaPredicted RBP18.2■□□□□ 0.5
TUBE1-206ENST00000603722 POLR3CQ9BUI4 534 aaPredicted RBP18.2■□□□□ 0.5
TUBE1-206ENST00000603722 C1QTNF1Q9BXJ1 281 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 GBP3Q9H0R5 595 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 NGRNQ9NPE2 291 aaKnown RBP18.2■□□□□ 0.5
TUBE1-206ENST00000603722 GPRC5CQ9NQ84 441 aa18.2■□□□□ 0.5
TUBE1-206ENST00000603722 TCF20Q9UGU0 1960 aaKnown RBP18.2■□□□□ 0.5
TUBE1-206ENST00000603722 XRCC6P12956 609 aaKnown RBP eCLIP18.19■□□□□ 0.5
TUBE1-206ENST00000603722 U2AF2P26368 475 aaKnown RBP eCLIP18.19■□□□□ 0.51e-10■■■■■ 46.1
TUBE1-206ENST00000603722 TMEM173Q86WV6 379 aaPredicted RBP18.19■□□□□ 0.5
TUBE1-206ENST00000603722 ADHFE1Q8IWW8 467 aa18.19■□□□□ 0.5
TUBE1-206ENST00000603722 URGCPQ8TCY9 931 aa18.19■□□□□ 0.5
TUBE1-206ENST00000603722 TMEM169Q96HH4 297 aa18.19■□□□□ 0.5
TUBE1-206ENST00000603722 CPB2Q96IY4 423 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms