RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 ANKRD54Q6NXT1 300 aa23.72■■□□□ 1.39
PPFIA3-209ENST00000602783 POTEDQ86YR6 584 aa23.72■■□□□ 1.39
PPFIA3-209ENST00000602783 SLC7A3Q8WY07 619 aa23.72■■□□□ 1.39
PPFIA3-209ENST00000602783 SUSD6Q92537 303 aa23.72■■□□□ 1.39
PPFIA3-209ENST00000602783 TNFRSF25Q93038 417 aa23.72■■□□□ 1.39
PPFIA3-209ENST00000602783 RPGRIP1Q96KN7 1286 aa23.72■■□□□ 1.39
PPFIA3-209ENST00000602783 NAP1L4Q99733 375 aaKnown RBP23.72■■□□□ 1.39
PPFIA3-209ENST00000602783 WRAP73Q9P2S5 460 aaPredicted RBP23.72■■□□□ 1.39
PPFIA3-209ENST00000602783 POLGP54098 1239 aaPredicted RBP23.71■■□□□ 1.39
PPFIA3-209ENST00000602783 CBX2Q14781 532 aaPredicted RBP23.71■■□□□ 1.39
PPFIA3-209ENST00000602783 EPHA7Q15375 998 aa23.71■■□□□ 1.39
PPFIA3-209ENST00000602783 HFE2Q6ZVN8 426 aa23.71■■□□□ 1.39
PPFIA3-209ENST00000602783 MRPL43Q8N983 215 aaKnown RBP23.71■■□□□ 1.39
PPFIA3-209ENST00000602783 EDAQ92838 391 aa23.71■■□□□ 1.39
PPFIA3-209ENST00000602783 APOL5Q9BWW9 433 aa23.71■■□□□ 1.39
PPFIA3-209ENST00000602783 S1PR5Q9H228 398 aa23.71■■□□□ 1.39
PPFIA3-209ENST00000602783 IFT122Q9HBG6 1241 aa23.71■■□□□ 1.39
PPFIA3-209ENST00000602783 FAM105AQ9NUU6 356 aa23.71■■□□□ 1.39
PPFIA3-209ENST00000602783 COL4A3BPQ9Y5P4 624 aa23.71■■□□□ 1.39
PPFIA3-209ENST00000602783 TRIOO75962 3097 aa23.7■■□□□ 1.39
PPFIA3-209ENST00000602783 CA8P35219 290 aa23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 SMC1AQ14683 1233 aaKnown RBP23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 NCAPH2Q6IBW4 605 aa23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 SYCE2Q6PIF2 218 aa23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 C4orf19Q8IY42 314 aa23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 EXOC8Q8IYI6 725 aa23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 PRPF31Q8WWY3 499 aaKnown RBP23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 TMEM143Q96AN5 459 aa23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 TMEM169Q96HH4 297 aa23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 LXNQ9BS40 222 aa23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 DHX33Q9H6R0 707 aaKnown RBP23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 BMP2KQ9NSY1 1161 aaPredicted RBP23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 RGL1Q9NZL6 768 aa23.7■■□□□ 1.38
PPFIA3-209ENST00000602783 MEIS3P2A8K0S8 358 aa23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 ZC3H11AO75152 810 aaKnown RBP eCLIP23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 BAG4O95429 457 aaKnown RBP23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 SRGAP2CP0DJJ0 459 aa23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 HOXD11P31277 338 aaPredicted RBP23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 RAB27AP51159 221 aa23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 C8orf34Q49A92 452 aa23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 GLB1LQ6UWU2 654 aa23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 OTUD6AQ7L8S5 288 aa23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 RSPH1Q8WYR4 309 aa23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 DYDC2Q96IM9 177 aa23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 INPP5FQ9Y2H2 1132 aa23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 PPME1Q9Y570 386 aa23.69■■□□□ 1.38
PPFIA3-209ENST00000602783 TECTAO75443 2155 aa23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 C2orf71A6NGG8 1288 aa23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 ZNF623O75123 536 aa23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 CXCL14O95715 111 aa23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 YWHABP31946 246 aaKnown RBP23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 RFC5P40937 340 aa23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 TRIM29Q14134 588 aa23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 CTTNQ14247 550 aaKnown RBP23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 BMS1Q14692 1282 aaKnown RBP23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 NOMO2Q5JPE7 1267 aa23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 DIS3L2Q8IYB7 885 aaKnown RBP23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 SLFN12Q8IYM2 578 aa23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 PSPC1Q8WXF1 523 aaKnown RBP23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 CASP10Q92851 521 aa23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 NRDE2Q9H7Z3 1164 aa23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 TBC1D13Q9NVG8 400 aa23.68■■□□□ 1.38
PPFIA3-209ENST00000602783 BTBD18B2RXH4 712 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 ZBTB39O15060 712 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 OFD1O75665 1012 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 HOXB8P17481 243 aaPredicted RBP23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 CYP4A11Q02928 519 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 RNASELQ05823 741 aaKnown RBP23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 SPIRE1Q08AE8 756 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 LAMTOR4Q0VGL1 99 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 XKR9Q5GH70 373 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 SRGAP1Q7Z6B7 1085 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 TMEM173Q86WV6 379 aaPredicted RBP23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 VPS52Q8N1B4 723 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 PGBD4Q96DM1 585 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 MFSD14AQ96MC6 490 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 GBP3Q9H0R5 595 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 ZSWIM4Q9H7M6 989 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 AGPAT5Q9NUQ2 364 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 LIMCH1Q9UPQ0 1083 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 PCDHB2Q9Y5E7 798 aa23.67■■□□□ 1.38
PPFIA3-209ENST00000602783 CLASP2O75122 1294 aaKnown RBP23.66■■□□□ 1.38
PPFIA3-209ENST00000602783 TRIM67Q6ZTA4 783 aa23.66■■□□□ 1.38
PPFIA3-209ENST00000602783 CCDC83Q8IWF9 413 aa23.66■■□□□ 1.38
PPFIA3-209ENST00000602783 TPH2Q8IWU9 490 aa23.66■■□□□ 1.38
PPFIA3-209ENST00000602783 TCP11Q8WWU5 503 aa23.66■■□□□ 1.38
PPFIA3-209ENST00000602783 MINDY3Q9H8M7 445 aa23.66■■□□□ 1.38
PPFIA3-209ENST00000602783 HCFC2Q9Y5Z7 792 aa23.66■■□□□ 1.38
PPFIA3-209ENST00000602783 CARNS1A5YM72 827 aa23.65■■□□□ 1.38
PPFIA3-209ENST00000602783 GALTP07902 379 aa23.65■■□□□ 1.38
PPFIA3-209ENST00000602783 ZXDAP98168 799 aa23.65■■□□□ 1.38
PPFIA3-209ENST00000602783 EMC2Q15006 297 aa23.65■■□□□ 1.38
PPFIA3-209ENST00000602783 TPRNQ4KMQ1 711 aa23.65■■□□□ 1.38
PPFIA3-209ENST00000602783 TMEM87AQ8NBN3 555 aa23.65■■□□□ 1.38
PPFIA3-209ENST00000602783 AUTS2Q8WXX7 1259 aa23.65■■□□□ 1.38
PPFIA3-209ENST00000602783 IGSF21Q96ID5 467 aa23.65■■□□□ 1.38
PPFIA3-209ENST00000602783 ZBP1Q9H171 429 aa23.65■■□□□ 1.38
PPFIA3-209ENST00000602783 WNT7AO00755 349 aa23.64■■□□□ 1.37
PPFIA3-209ENST00000602783 ASAP2O43150 1006 aa23.64■■□□□ 1.37
PPFIA3-209ENST00000602783 GAS2O43903 313 aaKnown RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms