RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 POLR3FQ9H1D9 316 aaPredicted RBP11.12□□□□□ -0.63
UPF1-213ENST00000601981 WNT8AQ9H1J5 351 aa11.12□□□□□ -0.63
UPF1-213ENST00000601981 C17orf75Q9HAS0 396 aa11.12□□□□□ -0.63
UPF1-213ENST00000601981 IL23AQ9NPF7 189 aa11.12□□□□□ -0.63
UPF1-213ENST00000601981 ODF2LQ9ULJ1 636 aa11.12□□□□□ -0.63
UPF1-213ENST00000601981 SZT2Q5T011 3432 aa11.12□□□□□ -0.63
UPF1-213ENST00000601981 UMODL1Q5DID0 1318 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 PHLPP2Q6ZVD8 1323 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 GPR182O15218 404 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 EFCAB14O75071 495 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 RPN1P04843 607 aaKnown RBP11.11□□□□□ -0.63
UPF1-213ENST00000601981 CSF2RAP15509 400 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 SFPQP23246 707 aaKnown RBP eCLIP11.11□□□□□ -0.63
UPF1-213ENST00000601981 ERCC5P28715 1186 aaPredicted RBP11.11□□□□□ -0.63
UPF1-213ENST00000601981 CDC25BP30305 580 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 MAGEA10P43363 369 aaPredicted RBP11.11□□□□□ -0.63
UPF1-213ENST00000601981 ZNF75DP51815 510 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 SMTNP53814 917 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 PLCB2Q00722 1185 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 POU5F1BQ06416 359 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 MGAT3Q09327 533 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 LAMTOR4Q0VGL1 99 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 PAK2Q13177 524 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 DMP1Q13316 513 aaPredicted RBP11.11□□□□□ -0.63
UPF1-213ENST00000601981 KIZQ2M2Z5 673 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 TSHZ1Q6ZSZ6 1077 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 C1orf186Q6ZWK4 172 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 MAEAQ7L5Y9 396 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 SRGAP1Q7Z6B7 1085 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 DEFB128Q7Z7B8 93 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 ZBTB8OSQ8IWT0 167 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 LRRC15Q8TF66 581 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 PRPF31Q8WWY3 499 aaKnown RBP11.11□□□□□ -0.63
UPF1-213ENST00000601981 SEPT8Q92599 483 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 OSMRQ99650 979 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 C7orf25Q9BPX7 421 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 UBE2OQ9C0C9 1292 aaKnown RBP11.11□□□□□ -0.63
UPF1-213ENST00000601981 C2orf40Q9H1Z8 148 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 XPNPEP1Q9NQW7 623 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 BLOC1S4Q9NUP1 217 aa11.11□□□□□ -0.63
UPF1-213ENST00000601981 LARSQ9P2J5 1176 aaKnown RBP11.11□□□□□ -0.63
UPF1-213ENST00000601981 A0A087WZ62 844 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 LRRIQ4A6NIV6 560 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 H0YCG3 227 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 HIP1RO75146 1068 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 RPS6KA5O75582 802 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 FAM13AO94988 1023 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 CHRNA1P02708 482 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 CXCL10P02778 98 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 GHRP10912 638 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 EIF4BP23588 611 aaKnown RBP11.1□□□□□ -0.63
UPF1-213ENST00000601981 ITGB8P26012 769 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 CASP1P29466 404 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 ABCD1P33897 745 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 ARL2P36404 184 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 NAMPTP43490 491 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 NCBP1Q09161 790 aaKnown RBP11.1□□□□□ -0.63
UPF1-213ENST00000601981 DRP2Q13474 957 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 PCBP1Q15365 356 aaKnown RBP eCLIP11.1□□□□□ -0.63
UPF1-213ENST00000601981 FBXO47Q5MNV8 452 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 ZNF658Q5TYW1 1059 aaPredicted RBP11.1□□□□□ -0.63
UPF1-213ENST00000601981 CNNM4Q6P4Q7 775 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 CNKSR3Q6P9H4 555 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 RNF149Q8NC42 400 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 SLC17A8Q8NDX2 589 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 DEPTORQ8TB45 409 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 ENOX1Q8TC92 643 aaKnown RBP11.1□□□□□ -0.63
UPF1-213ENST00000601981 STAMQ92783 540 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 CCDC47Q96A33 483 aaKnown RBP11.1□□□□□ -0.63
UPF1-213ENST00000601981 MRFAP1L1Q96HT8 127 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 PPP1R16BQ96T49 567 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 FDXACB1Q9BRP7 624 aaPredicted RBP11.1□□□□□ -0.63
UPF1-213ENST00000601981 RUSC1Q9BVN2 902 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 FTHL17Q9BXU8 183 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 IFIH1Q9BYX4 1025 aaKnown RBP11.1□□□□□ -0.63
UPF1-213ENST00000601981 TRIM9Q9C026 710 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 TRIM5Q9C035 493 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 BLZF1Q9H2G9 400 aa11.1□□□□□ -0.63
UPF1-213ENST00000601981 RANBP2P49792 3224 aaKnown RBP11.09□□□□□ -0.63
UPF1-213ENST00000601981 KLRC4O43908 158 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 NBNO60934 754 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 GPR32O75388 356 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 BAIAP3O94812 1187 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 ERLIN2O94905 339 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 RHOBTB3O94955 611 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 FGBP02675 491 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 SRGAP2CP0DJJ0 459 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 DARSP14868 501 aaKnown RBP11.09□□□□□ -0.63
UPF1-213ENST00000601981 SCP2P22307 547 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 KCNJ6P48051 423 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 RAD51AP2Q09MP3 1159 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
UPF1-213ENST00000601981 IKBKEQ14164 716 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 TRAF7Q6Q0C0 670 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 REEP2Q9BRK0 252 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 NFKBIZQ9BYH8 718 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 ADAMTS10Q9H324 1103 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 ZHX3Q9H4I2 956 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 PARVGQ9HBI0 331 aa11.09□□□□□ -0.63
UPF1-213ENST00000601981 GPRC5CQ9NQ84 441 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms