RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CREBRFQ8IUR6 639 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 ZBTB8OSQ8IWT0 167 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 ZC3H3Q8IXZ2 948 aaKnown RBP24.79■■□□□ 1.56
IRF3-228ENST00000601291 ZBTB10Q96DT7 871 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 CNOT6LQ96LI5 555 aaKnown RBP24.79■■□□□ 1.56
IRF3-228ENST00000601291 IFNKQ9P0W0 207 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 AKT3Q9Y243 479 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 GNA14O95837 355 aa24.78■■□□□ 1.56
IRF3-228ENST00000601291 NR3C1P04150 777 aa24.78■■□□□ 1.56
IRF3-228ENST00000601291 UBASH3AP57075 661 aa24.78■■□□□ 1.56
IRF3-228ENST00000601291 SLC9C1Q4G0N8 1177 aa24.78■■□□□ 1.56
IRF3-228ENST00000601291 IRF2BP1Q8IU81 584 aa24.78■■□□□ 1.56
IRF3-228ENST00000601291 RNF149Q8NC42 400 aa24.78■■□□□ 1.56
IRF3-228ENST00000601291 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.78■■□□□ 1.562e-7■■■□□ 14.6
IRF3-228ENST00000601291 TMEM134Q9H6X4 195 aa24.78■■□□□ 1.56
IRF3-228ENST00000601291 AGPAT3Q9NRZ7 376 aa24.78■■□□□ 1.56
IRF3-228ENST00000601291 LIMA1Q9UHB6 759 aaKnown RBP24.78■■□□□ 1.56
IRF3-228ENST00000601291 MBLAC1A4D2B0 266 aaPredicted RBP24.77■■□□□ 1.56
IRF3-228ENST00000601291 K7ERI5 159 aa24.77■■□□□ 1.56
IRF3-228ENST00000601291 CABYRO75952 493 aa24.77■■□□□ 1.56
IRF3-228ENST00000601291 TPM2P07951 284 aa24.77■■□□□ 1.56
IRF3-228ENST00000601291 SRGAP2CP0DJJ0 459 aa24.77■■□□□ 1.56
IRF3-228ENST00000601291 CDCA2Q69YH5 1023 aaPredicted RBP24.77■■□□□ 1.56
IRF3-228ENST00000601291 CCSAPQ6IQ19 270 aaPredicted RBP24.77■■□□□ 1.56
IRF3-228ENST00000601291 FILIP1Q7Z7B0 1213 aa24.77■■□□□ 1.56
IRF3-228ENST00000601291 EEF2KMTQ96G04 330 aa24.77■■□□□ 1.56
IRF3-228ENST00000601291 MRFAP1L1Q96HT8 127 aa24.77■■□□□ 1.56
IRF3-228ENST00000601291 NLRP4Q96MN2 994 aa24.77■■□□□ 1.56
IRF3-228ENST00000601291 FILIP1LQ4L180 1135 aa24.76■■□□□ 1.55
IRF3-228ENST00000601291 XPO4Q9C0E2 1151 aaKnown RBP24.76■■□□□ 1.55
IRF3-228ENST00000601291 HDAC6Q9UBN7 1215 aa24.76■■□□□ 1.55
IRF3-228ENST00000601291 SMIM35A0A1B0GVV1 85 aa24.76■■□□□ 1.55
IRF3-228ENST00000601291 CLIC2O15247 247 aa24.76■■□□□ 1.55
IRF3-228ENST00000601291 CYP2C9P11712 490 aa24.76■■□□□ 1.55
IRF3-228ENST00000601291 POU5F1BQ06416 359 aa24.76■■□□□ 1.55
IRF3-228ENST00000601291 MYBPC2Q14324 1141 aa24.76■■□□□ 1.55
IRF3-228ENST00000601291 KRT31Q15323 416 aa24.76■■□□□ 1.55
IRF3-228ENST00000601291 CCDC40Q4G0X9 1142 aa24.76■■□□□ 1.55
IRF3-228ENST00000601291 LHX8Q68G74 356 aa24.76■■□□□ 1.55
IRF3-228ENST00000601291 BICD1Q96G01 975 aa24.76■■□□□ 1.55
IRF3-228ENST00000601291 MOXD2PA6NHM9 499 aa24.75■■□□□ 1.55
IRF3-228ENST00000601291 HNRNPDLO14979 420 aaKnown RBP24.75■■□□□ 1.55
IRF3-228ENST00000601291 HSPA8P11142 646 aaKnown RBP24.75■■□□□ 1.55
IRF3-228ENST00000601291 HOXC8P31273 242 aa24.75■■□□□ 1.55
IRF3-228ENST00000601291 PHKA2P46019 1235 aa24.75■■□□□ 1.55
IRF3-228ENST00000601291 MTIF2P46199 727 aaKnown RBP24.75■■□□□ 1.55
IRF3-228ENST00000601291 ADAM17P78536 824 aa24.75■■□□□ 1.55
IRF3-228ENST00000601291 CDC42EP1Q00587 391 aa24.75■■□□□ 1.55
IRF3-228ENST00000601291 NBPF20Q3BBV1 942 aa24.75■■□□□ 1.55
IRF3-228ENST00000601291 TAS1R3Q7RTX0 852 aa24.75■■□□□ 1.55
IRF3-228ENST00000601291 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.75■■□□□ 1.55
IRF3-228ENST00000601291 C12orf56Q8IXR9 622 aa24.75■■□□□ 1.55
IRF3-228ENST00000601291 ARRDC4Q8NCT1 418 aa24.75■■□□□ 1.55
IRF3-228ENST00000601291 TSEN34Q9BSV6 310 aaKnown RBP24.75■■□□□ 1.55
IRF3-228ENST00000601291 NFKBIZQ9BYH8 718 aa24.75■■□□□ 1.55
IRF3-228ENST00000601291 IKZF4Q9H2S9 585 aa24.75■■□□□ 1.55
IRF3-228ENST00000601291 LRRC10BA6NIK2 292 aa24.74■■□□□ 1.55
IRF3-228ENST00000601291 SLC16A3O15427 465 aaKnown RBP24.74■■□□□ 1.55
IRF3-228ENST00000601291 GJB1P08034 283 aa24.74■■□□□ 1.55
IRF3-228ENST00000601291 CDC25BP30305 580 aa24.74■■□□□ 1.55
IRF3-228ENST00000601291 ARMCX5Q6P1M9 558 aa24.74■■□□□ 1.55
IRF3-228ENST00000601291 CTU1Q7Z7A3 348 aaKnown RBP24.74■■□□□ 1.55
IRF3-228ENST00000601291 SLC9A9Q8IVB4 645 aa24.74■■□□□ 1.55
IRF3-228ENST00000601291 KIAA0319LQ8IZA0 1049 aa24.74■■□□□ 1.55
IRF3-228ENST00000601291 PPP1R13LQ8WUF5 828 aa24.74■■□□□ 1.55
IRF3-228ENST00000601291 PDLIM2Q96JY6 352 aa24.74■■□□□ 1.55
IRF3-228ENST00000601291 GTF2IRD1Q9UHL9 959 aa24.74■■□□□ 1.55
IRF3-228ENST00000601291 SIP14410 1827 aa24.73■■□□□ 1.55
IRF3-228ENST00000601291 PCNTO95613 3336 aa24.73■■□□□ 1.55
IRF3-228ENST00000601291 A0A1B0GTH6 734 aa24.73■■□□□ 1.55
IRF3-228ENST00000601291 VTNP04004 478 aa24.73■■□□□ 1.55
IRF3-228ENST00000601291 EPB41P11171 864 aaKnown RBP24.73■■□□□ 1.55
IRF3-228ENST00000601291 LIG4P49917 911 aa24.73■■□□□ 1.55
IRF3-228ENST00000601291 ACLYP53396 1101 aa24.73■■□□□ 1.55
IRF3-228ENST00000601291 COPB1P53618 953 aaKnown RBP24.73■■□□□ 1.55
IRF3-228ENST00000601291 MAPK6Q16659 721 aa24.73■■□□□ 1.55
IRF3-228ENST00000601291 APTXQ7Z2E3 356 aaKnown RBP24.73■■□□□ 1.55
IRF3-228ENST00000601291 TMEM174Q8WUU8 243 aa24.73■■□□□ 1.55
IRF3-228ENST00000601291 SCLT1Q96NL6 688 aa24.73■■□□□ 1.55
IRF3-228ENST00000601291 TUBGCP2Q9BSJ2 902 aa24.73■■□□□ 1.55
IRF3-228ENST00000601291 FAM49AQ9H0Q0 323 aaPredicted RBP24.73■■□□□ 1.55
IRF3-228ENST00000601291 UNC93B1Q9H1C4 597 aa24.73■■□□□ 1.55
IRF3-228ENST00000601291 TAB2Q9NYJ8 693 aa24.73■■□□□ 1.55
IRF3-228ENST00000601291 SCN10AQ9Y5Y9 1956 aa24.72■■□□□ 1.55
IRF3-228ENST00000601291 PRKCSHP14314 528 aaPredicted RBP24.72■■□□□ 1.55
IRF3-228ENST00000601291 PTENP60484 403 aa24.72■■□□□ 1.55
IRF3-228ENST00000601291 FAM47CQ5HY64 1035 aa24.72■■□□□ 1.55
IRF3-228ENST00000601291 CEP135Q66GS9 1140 aa24.72■■□□□ 1.55
IRF3-228ENST00000601291 ZNF410Q86VK4 478 aa24.72■■□□□ 1.55
IRF3-228ENST00000601291 NLRP7Q8WX94 980 aa24.72■■□□□ 1.55
IRF3-228ENST00000601291 NAP1L5Q96NT1 182 aaPredicted RBP24.72■■□□□ 1.55
IRF3-228ENST00000601291 PPP1R9BQ96SB3 815 aa24.72■■□□□ 1.55
IRF3-228ENST00000601291 CCDC113Q9H0I3 377 aa24.72■■□□□ 1.55
IRF3-228ENST00000601291 FRMD4BQ9Y2L6 1034 aa24.72■■□□□ 1.55
IRF3-228ENST00000601291 KAT6AQ92794 2004 aa24.72■■□□□ 1.55
IRF3-228ENST00000601291 N4BP3O15049 544 aa24.71■■□□□ 1.55
IRF3-228ENST00000601291 TREHO43280 583 aa24.71■■□□□ 1.55
IRF3-228ENST00000601291 PIGRP01833 764 aa24.71■■□□□ 1.55
IRF3-228ENST00000601291 CYP2J2P51589 502 aa24.71■■□□□ 1.55
IRF3-228ENST00000601291 MARSP56192 900 aaKnown RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms