RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 SGSM2O43147 1006 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 RFPL2O75678 378 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 PHKA2P46019 1235 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 GIT2Q14161 759 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 NOMO2Q5JPE7 1267 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 TWF2Q6IBS0 349 aaKnown RBP11.24□□□□□ -0.61
HIF3A-219ENST00000600879 GLB1LQ6UWU2 654 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 NIPA1Q7RTP0 329 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 PPFIBP1Q86W92 1011 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 ZNF280BQ86YH2 543 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 TMTC2Q8N394 836 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 MAP4K1Q92918 833 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 EMILIN2Q9BXX0 1053 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 MAN1C1Q9NR34 630 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 ARHGEF3Q9NR81 526 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 DACT1Q9NYF0 836 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 IGSF9Q9P2J2 1179 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 NCDNQ9UBB6 729 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 WNT16Q9UBV4 365 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 PCDHA10Q9Y5I2 948 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 V9GY48 417 aaPredicted RBP11.24□□□□□ -0.61
HIF3A-219ENST00000600879 OTOGLQ3ZCN5 2332 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 TPRP12270 2363 aaKnown RBP11.23□□□□□ -0.61
HIF3A-219ENST00000600879 CCDC195A0A1B0GUA6 201 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 TMEM150BA6NC51 233 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 CHMP2AO43633 222 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 ZNF862O60290 1169 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 OATP04181 439 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 CLK2P49760 499 aaKnown RBP11.23□□□□□ -0.61
HIF3A-219ENST00000600879 AFF1P51825 1210 aaKnown RBP11.23□□□□□ -0.61
HIF3A-219ENST00000600879 PRKCEQ02156 737 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 AP3B2Q13367 1082 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 UGCGQ16739 394 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 ZNF746Q6NUN9 644 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-219ENST00000600879 PPP1R18Q6NYC8 613 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 ZC3H14Q6PJT7 736 aaKnown RBP11.23□□□□□ -0.61
HIF3A-219ENST00000600879 TSSK4Q6SA08 328 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 SH2D3AQ9BRG2 576 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 RPP25Q9BUL9 199 aaKnown RBP11.23□□□□□ -0.61
HIF3A-219ENST00000600879 PIN4Q9Y237 131 aaKnown RBP11.23□□□□□ -0.61
HIF3A-219ENST00000600879 MTF2Q9Y483 593 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-219ENST00000600879 C2orf16Q68DN1 1984 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 ACACBO00763 2458 aa11.23□□□□□ -0.61
HIF3A-219ENST00000600879 A0A087WZ62 844 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 INPPL1O15357 1258 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 KINO60870 393 aaKnown RBP11.22□□□□□ -0.61
HIF3A-219ENST00000600879 CLUHO75153 1309 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 OFD1O75665 1012 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 SRFP11831 508 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 KCNA4P22459 653 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 LIFRP42702 1097 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 AK2P54819 239 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 MTERF2Q49AM1 385 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 PRR16Q569H4 304 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 BMP2KLQ5H9B9 411 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 VARS2Q5ST30 1063 aaKnown RBP11.22□□□□□ -0.61
HIF3A-219ENST00000600879 DCLRE1AQ6PJP8 1040 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 SYNE3Q6ZMZ3 975 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 GET4Q7L5D6 327 aaPredicted RBP11.22□□□□□ -0.61
HIF3A-219ENST00000600879 TAS1R1Q7RTX1 841 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 SMAP1Q8IYB5 467 aaPredicted RBP11.22□□□□□ -0.61
HIF3A-219ENST00000600879 GJA10Q969M2 543 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 FAM167AQ96KS9 214 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 TCEANC2Q96MN5 208 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 FDXACB1Q9BRP7 624 aaPredicted RBP11.22□□□□□ -0.61
HIF3A-219ENST00000600879 GCOM2Q9BZD3 368 aaPredicted RBP11.22□□□□□ -0.61
HIF3A-219ENST00000600879 NRBP2Q9NSY0 501 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 TBC1D22BQ9NU19 505 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 FAM105AQ9NUU6 356 aa11.22□□□□□ -0.61
HIF3A-219ENST00000600879 SPATA6Q9NWH7 488 aaPredicted RBP11.22□□□□□ -0.61
HIF3A-219ENST00000600879 F8W810 466 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 SLC27A2O14975 620 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 DDHD2O94830 711 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 CD72P21854 359 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 CSTF1Q05048 431 aaKnown RBP11.21□□□□□ -0.61
HIF3A-219ENST00000600879 FUT2Q10981 343 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 SNW1Q13573 536 aaKnown RBP11.21□□□□□ -0.61
HIF3A-219ENST00000600879 NONOQ15233 471 aaKnown RBP eCLIP11.21□□□□□ -0.61
HIF3A-219ENST00000600879 LPAL2Q16609 132 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 RTN1Q16799 776 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 C15orf39Q6ZRI6 1047 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 GLYCTKQ8IVS8 523 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 KSR1Q8IVT5 923 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 PJA1Q8NG27 643 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 SMG7Q92540 1137 aaKnown RBP11.21□□□□□ -0.61
HIF3A-219ENST00000600879 CHAMP1Q96JM3 812 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 B3GALT6Q96L58 329 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 MTA3Q9BTC8 594 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 WDR6Q9NNW5 1121 aaKnown RBP11.21□□□□□ -0.61
HIF3A-219ENST00000600879 PARD6AQ9NPB6 346 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 DISC1Q9NRI5 854 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 MRPL17Q9NRX2 175 aaKnown RBP11.21□□□□□ -0.61
HIF3A-219ENST00000600879 BARHL2Q9NY43 387 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 SEPT9Q9UHD8 586 aaPredicted RBP11.21□□□□□ -0.61
HIF3A-219ENST00000600879 CDV3Q9UKY7 258 aaKnown RBP11.21□□□□□ -0.61
HIF3A-219ENST00000600879 USP18Q9UMW8 372 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 PRG3Q9Y2Y8 225 aaPredicted RBP11.21□□□□□ -0.61
HIF3A-219ENST00000600879 NUMBLQ9Y6R0 609 aa11.21□□□□□ -0.61
HIF3A-219ENST00000600879 WDR64B1ANS9 1081 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 TEX28O15482 410 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms