RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 CHRNA1P02708 482 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 CKBP12277 381 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 CRYBB1P53674 252 aaPredicted RBP15.81■□□□□ 0.12
UPF1-211ENST00000600868 MGAT3Q09327 533 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 TMEM62Q0P6H9 643 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 ISM2Q6H9L7 571 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 SRGAP1Q7Z6B7 1085 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 ADGRA3Q8IWK6 1321 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 NLRP7Q8WX94 980 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 FDXACB1Q9BRP7 624 aaPredicted RBP15.81■□□□□ 0.12
UPF1-211ENST00000600868 KIFC3Q9BVG8 833 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 FGFBP2Q9BYJ0 223 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 GCOM2Q9BZD3 368 aaPredicted RBP15.81■□□□□ 0.12
UPF1-211ENST00000600868 GDAQ9Y2T3 454 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 TRPV2Q9Y5S1 764 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 CDY2AQ9Y6F7 541 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 UBE4BO95155 1302 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 DENND3A2RUS2 1198 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 CLTBP09497 229 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 MYBP10242 640 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 DARSP14868 501 aaKnown RBP15.8■□□□□ 0.12
UPF1-211ENST00000600868 EIF4BP23588 611 aaKnown RBP15.8■□□□□ 0.12
UPF1-211ENST00000600868 PPP1R2P41236 205 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 CASP5P51878 434 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 PCBP1Q15365 356 aaKnown RBP eCLIP15.8■□□□□ 0.12
UPF1-211ENST00000600868 BMT2Q1RMZ1 405 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 GUF1Q8N442 669 aaKnown RBP15.8■□□□□ 0.12
UPF1-211ENST00000600868 MLKLQ8NB16 471 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 GLIS3Q8NEA6 775 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 ZNF507Q8TCN5 953 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 SCFD1Q8WVM8 642 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 ZNF668Q96K58 619 aaPredicted RBP15.8■□□□□ 0.12
UPF1-211ENST00000600868 SCLT1Q96NL6 688 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 PPP1R16BQ96T49 567 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 INO80BQ9C086 356 aaPredicted RBP15.8■□□□□ 0.12
UPF1-211ENST00000600868 CCDC113Q9H0I3 377 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 CDHR5Q9HBB8 845 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 TBX21Q9UL17 535 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 SQORQ9Y6N5 450 aa15.8■□□□□ 0.12
UPF1-211ENST00000600868 K7ERI5 159 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 KIF20AO95235 890 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 CCDC192P0DO97 292 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 PRCPP42785 496 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 MBTD1Q05BQ5 628 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 TYRO3Q06418 890 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 STX1AQ16623 288 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 FAM187BQ17R55 369 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 ZC2HC1CQ53FD0 456 aaPredicted RBP15.79■□□□□ 0.12
UPF1-211ENST00000600868 L1TD1Q5T7N2 865 aaKnown RBP15.79■□□□□ 0.12
UPF1-211ENST00000600868 ZNF618Q5T7W0 954 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 TRAF7Q6Q0C0 670 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 TAS1R3Q7RTX0 852 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 SMYD4Q8IYR2 804 aaPredicted RBP15.79■□□□□ 0.12
UPF1-211ENST00000600868 MYOCDQ8IZQ8 938 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 OSMRQ99650 979 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 ANP32EQ9BTT0 268 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 FUCA2Q9BTY2 467 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 NOC4LQ9BVI4 516 aaKnown RBP15.79■□□□□ 0.12
UPF1-211ENST00000600868 GZF1Q9H116 711 aaPredicted RBP15.79■□□□□ 0.12
UPF1-211ENST00000600868 FZD8Q9H461 694 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 ANO10Q9NW15 660 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 TBX20Q9UMR3 447 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 GINS2Q9Y248 185 aa15.79■□□□□ 0.12
UPF1-211ENST00000600868 SIP14410 1827 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 PPP1R3GB7ZBB8 358 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 PRPF6O94906 941 aaKnown RBP15.78■□□□□ 0.12
UPF1-211ENST00000600868 CTSHP09668 335 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 SELPP16109 830 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 STIM1Q13586 685 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 MAPK6Q16659 721 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 DPCR1Q3MIW9 517 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 CT47A1Q5JQC4 288 aaPredicted RBP15.78■□□□□ 0.12
UPF1-211ENST00000600868 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 MAP4K3Q8IVH8 894 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 ADSSL1Q8N142 457 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 ACCSQ96QU6 501 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 HIPK3Q9H422 1215 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 MINDY3Q9H8M7 445 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 TMEM39AQ9NV64 488 aa15.78■□□□□ 0.12
UPF1-211ENST00000600868 PRMT7Q9NVM4 692 aaPredicted RBP15.78■□□□□ 0.12
UPF1-211ENST00000600868 INO80B-WBP1J3KQ70 363 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 ACKR2O00590 384 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 KIAA0355O15063 1070 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 PARNO95453 639 aaKnown RBP15.77■□□□□ 0.12
UPF1-211ENST00000600868 PRKCBP05771 671 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 IQCF3P0C7M6 154 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 CD44P16070 742 aaKnown RBP15.77■□□□□ 0.12
UPF1-211ENST00000600868 HOXD13P35453 343 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 ZNF445P59923 1031 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 KCNA1Q09470 495 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 STRN3Q13033 797 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 KNOP1Q1ED39 458 aaKnown RBP15.77■□□□□ 0.12
UPF1-211ENST00000600868 FBXO47Q5MNV8 452 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 LRRC8DQ7L1W4 858 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 USP38Q8NB14 1042 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 TMEM40Q8WWA1 233 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 DHTKD1Q96HY7 919 aaPredicted RBP15.77■□□□□ 0.12
UPF1-211ENST00000600868 PRIMPOLQ96LW4 560 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 HTATIP2Q9BUP3 242 aa15.77■□□□□ 0.12
UPF1-211ENST00000600868 TMEM206Q9H813 350 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms