RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 TRAPPC12Q8WVT3 735 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 POMGNT1Q8WZA1 660 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 CCDC42Q96M95 316 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 PLXNA1Q9UIW2 1896 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 TRPM7Q96QT4 1865 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 K7ERI5 159 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 MAFO75444 373 aaPredicted RBP16.55■□□□□ 0.24
HIF3A-218ENST00000600383 ARL2P36404 184 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 SNRPFP62306 86 aaKnown RBP16.55■□□□□ 0.24
HIF3A-218ENST00000600383 ETF1P62495 437 aaKnown RBP16.55■□□□□ 0.24
HIF3A-218ENST00000600383 STRN3Q13033 797 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 ENOX2Q16206 610 aaKnown RBP16.55■□□□□ 0.24
HIF3A-218ENST00000600383 PDXDC1Q6P996 788 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 TRIM65Q6PJ69 517 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 MAMDC4Q6UXC1 1216 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 INTS8Q75QN2 995 aaKnown RBP16.55■□□□□ 0.24
HIF3A-218ENST00000600383 TAS1R3Q7RTX0 852 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 IFNL1Q8IU54 200 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 LRRC71Q8N4P6 559 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 AFG1LQ8WV93 481 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 PRPF31Q8WWY3 499 aaKnown RBP16.55■□□□□ 0.24
HIF3A-218ENST00000600383 HVCN1Q96D96 273 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 IRX2Q9BZI1 471 aaPredicted RBP16.55■□□□□ 0.24
HIF3A-218ENST00000600383 EDEM3Q9BZQ6 932 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 RNPEPQ9H4A4 650 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 ARHGAP28Q9P2N2 729 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 KCNG1Q9UIX4 513 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 PAXBP1Q9Y5B6 917 aa16.55■□□□□ 0.24
HIF3A-218ENST00000600383 SLC15A5A6NIM6 579 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 CYLC1P35663 651 aaPredicted RBP16.54■□□□□ 0.24
HIF3A-218ENST00000600383 VAMP7P51809 220 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 GNG11P61952 73 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 IGBP1P78318 339 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 RAPGEF1Q13905 1077 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 PPP2R5AQ15172 486 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 CBWD6Q4V339 395 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 ARHGAP29Q52LW3 1261 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 CBWD3Q5JTY5 395 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 CBWD5Q5RIA9 395 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 PRAMEF19Q5SWL8 479 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 SFMBT2Q5VUG0 894 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
HIF3A-218ENST00000600383 CBWD2Q8IUF1 395 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 C12orf56Q8IXR9 622 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 PRIMPOLQ96LW4 560 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 DEF6Q9H4E7 631 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 GPBP1L1Q9HC44 474 aaPredicted RBP16.54■□□□□ 0.24
HIF3A-218ENST00000600383 SLC5A4Q9NY91 659 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 ARHGAP20Q9P2F6 1191 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 H0YCG3 227 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 ABL1P00519 1130 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 SRGAP2CP0DJJ0 459 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 UCHL3P15374 230 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 NAMPTP43490 491 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 ACVR2BQ13705 512 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 SNRNP35Q16560 246 aaKnown RBP16.54■□□□□ 0.24
HIF3A-218ENST00000600383 BRDTQ58F21 947 aaPredicted RBP16.54■□□□□ 0.24
HIF3A-218ENST00000600383 KLHDC7AQ5VTJ3 777 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 SLC39A4Q6P5W5 647 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 METTL13Q8N6R0 699 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 CCDC127Q96BQ5 260 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 ZBTB10Q96DT7 871 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 KATNBL1Q9H079 304 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 ABHD16BQ9H3Z7 469 aa16.54■□□□□ 0.24
HIF3A-218ENST00000600383 RIOK3O14730 519 aaKnown RBP16.53■□□□□ 0.24
HIF3A-218ENST00000600383 IPO7O95373 1038 aaKnown RBP16.53■□□□□ 0.24
HIF3A-218ENST00000600383 HNRNPH3P31942 346 aaKnown RBP16.53■□□□□ 0.24
HIF3A-218ENST00000600383 EIF4A3P38919 411 aaKnown RBP16.53■□□□□ 0.24
HIF3A-218ENST00000600383 LIG4P49917 911 aa16.53■□□□□ 0.24
HIF3A-218ENST00000600383 CYP27A1Q02318 531 aa16.53■□□□□ 0.24
HIF3A-218ENST00000600383 TDRD12Q587J7 1177 aaKnown RBP16.53■□□□□ 0.24
HIF3A-218ENST00000600383 GJB7Q6PEY0 223 aa16.53■□□□□ 0.24
HIF3A-218ENST00000600383 SPAG5Q96R06 1193 aa16.53■□□□□ 0.24
HIF3A-218ENST00000600383 GANQ9H2C0 597 aa16.53■□□□□ 0.24
HIF3A-218ENST00000600383 ERAP1Q9NZ08 941 aa16.53■□□□□ 0.24
HIF3A-218ENST00000600383 TFR2Q9UP52 801 aa16.53■□□□□ 0.24
HIF3A-218ENST00000600383 EMSYQ7Z589 1322 aa16.53■□□□□ 0.24
HIF3A-218ENST00000600383 PASKQ96RG2 1323 aa16.53■□□□□ 0.24
HIF3A-218ENST00000600383 ZBTB42B2RXF5 422 aa16.52■□□□□ 0.24
HIF3A-218ENST00000600383 TLR2O60603 784 aa16.52■□□□□ 0.24
HIF3A-218ENST00000600383 SLC10A3P09131 477 aa16.52■□□□□ 0.24
HIF3A-218ENST00000600383 ZNF286BP0CG31 522 aa16.52■□□□□ 0.24
HIF3A-218ENST00000600383 SMPD1P17405 629 aa16.52■□□□□ 0.24
HIF3A-218ENST00000600383 GCLMP48507 274 aa16.52■□□□□ 0.24
HIF3A-218ENST00000600383 SLC26A2P50443 739 aa16.52■□□□□ 0.24
HIF3A-218ENST00000600383 CDK17Q00537 523 aa16.52■□□□□ 0.24
HIF3A-218ENST00000600383 CCDC170Q8IYT3 715 aa16.52■□□□□ 0.24
HIF3A-218ENST00000600383 DOCK3Q8IZD9 2030 aa16.52■□□□□ 0.24
HIF3A-218ENST00000600383 ZNF668Q96K58 619 aaPredicted RBP16.52■□□□□ 0.24
HIF3A-218ENST00000600383 PLCB1Q9NQ66 1216 aa16.52■□□□□ 0.24
HIF3A-218ENST00000600383 REXO2Q9Y3B8 237 aaKnown RBP16.52■□□□□ 0.24
HIF3A-218ENST00000600383 FHOD1Q9Y613 1164 aa16.52■□□□□ 0.24
HIF3A-218ENST00000600383 RBM47A0AV96 593 aaKnown RBP16.52■□□□□ 0.23
HIF3A-218ENST00000600383 AKR1B10O60218 316 aa16.52■□□□□ 0.23
HIF3A-218ENST00000600383 LGALS2P05162 132 aa16.52■□□□□ 0.23
HIF3A-218ENST00000600383 ADRB2P07550 413 aa16.52■□□□□ 0.23
HIF3A-218ENST00000600383 INHBEP58166 350 aa16.52■□□□□ 0.23
HIF3A-218ENST00000600383 CAPSQ13938 189 aa16.52■□□□□ 0.23
HIF3A-218ENST00000600383 RHPN2Q8IUC4 686 aa16.52■□□□□ 0.23
HIF3A-218ENST00000600383 TMEM174Q8WUU8 243 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms