RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 NR5A1Q13285 461 aa20.94■□□□□ 0.94
PNKP-213ENST00000599543 EARS2Q5JPH6 523 aaKnown RBP20.94■□□□□ 0.94
PNKP-213ENST00000599543 WRAP73Q9P2S5 460 aaPredicted RBP20.94■□□□□ 0.94
PNKP-213ENST00000599543 ARIH1Q9Y4X5 557 aaPredicted RBP20.94■□□□□ 0.94
PNKP-213ENST00000599543 FAM205CA6NFA0 338 aa20.93■□□□□ 0.94
PNKP-213ENST00000599543 FDPSP14324 419 aaKnown RBP20.93■□□□□ 0.94
PNKP-213ENST00000599543 ALDH7A1P49419 539 aaKnown RBP20.93■□□□□ 0.94
PNKP-213ENST00000599543 RAB27AP51159 221 aa20.93■□□□□ 0.94
PNKP-213ENST00000599543 RBM10P98175 930 aaKnown RBP20.93■□□□□ 0.94
PNKP-213ENST00000599543 EPHA7Q15375 998 aa20.93■□□□□ 0.94
PNKP-213ENST00000599543 OTUD6AQ7L8S5 288 aa20.93■□□□□ 0.94
PNKP-213ENST00000599543 TMC7Q7Z402 723 aa20.93■□□□□ 0.94
PNKP-213ENST00000599543 C4orf19Q8IY42 314 aa20.93■□□□□ 0.94
PNKP-213ENST00000599543 VN1R2Q8NFZ6 395 aa20.93■□□□□ 0.94
PNKP-213ENST00000599543 PSPC1Q8WXF1 523 aaKnown RBP20.93■□□□□ 0.94
PNKP-213ENST00000599543 DHX33Q9H6R0 707 aaKnown RBP20.93■□□□□ 0.94
PNKP-213ENST00000599543 BMP2KQ9NSY1 1161 aaPredicted RBP20.93■□□□□ 0.94
PNKP-213ENST00000599543 FAM105AQ9NUU6 356 aa20.93■□□□□ 0.94
PNKP-213ENST00000599543 MUTYHQ9UIF7 546 aa20.93■□□□□ 0.94
PNKP-213ENST00000599543 HIDE1A8MVS5 230 aa20.92■□□□□ 0.94
PNKP-213ENST00000599543 CYP4A11Q02928 519 aa20.92■□□□□ 0.94
PNKP-213ENST00000599543 SPIRE1Q08AE8 756 aa20.92■□□□□ 0.94
PNKP-213ENST00000599543 LONRF3Q496Y0 759 aa20.92■□□□□ 0.94
PNKP-213ENST00000599543 GLB1LQ6UWU2 654 aa20.92■□□□□ 0.94
PNKP-213ENST00000599543 RNF135Q8IUD6 432 aa20.92■□□□□ 0.94
PNKP-213ENST00000599543 SLC39A11Q8N1S5 342 aa20.92■□□□□ 0.94
PNKP-213ENST00000599543 ZNF579Q8NAF0 562 aaKnown RBP20.92■□□□□ 0.94
PNKP-213ENST00000599543 NSUN7Q8NE18 718 aaKnown RBP20.92■□□□□ 0.94
PNKP-213ENST00000599543 LPPQ93052 612 aa20.92■□□□□ 0.94
PNKP-213ENST00000599543 TMEM143Q96AN5 459 aa20.92■□□□□ 0.94
PNKP-213ENST00000599543 ZSWIM4Q9H7M6 989 aa20.92■□□□□ 0.94
PNKP-213ENST00000599543 IFT122Q9HBG6 1241 aa20.92■□□□□ 0.94
PNKP-213ENST00000599543 RGL1Q9NZL6 768 aa20.92■□□□□ 0.94
PNKP-213ENST00000599543 GAS2O43903 313 aaKnown RBP20.91■□□□□ 0.94
PNKP-213ENST00000599543 ZC3H11AO75152 810 aaKnown RBP eCLIP20.91■□□□□ 0.94
PNKP-213ENST00000599543 SRGAP2CP0DJJ0 459 aa20.91■□□□□ 0.94
PNKP-213ENST00000599543 BCAR1P56945 870 aa20.91■□□□□ 0.94
PNKP-213ENST00000599543 TRIM29Q14134 588 aa20.91■□□□□ 0.94
PNKP-213ENST00000599543 CTTNQ14247 550 aaKnown RBP20.91■□□□□ 0.94
PNKP-213ENST00000599543 SMC1AQ14683 1233 aaKnown RBP20.91■□□□□ 0.94
PNKP-213ENST00000599543 EMC2Q15006 297 aa20.91■□□□□ 0.94
PNKP-213ENST00000599543 XKR9Q5GH70 373 aa20.91■□□□□ 0.94
PNKP-213ENST00000599543 LLGL2Q6P1M3 1020 aa20.91■□□□□ 0.94
PNKP-213ENST00000599543 TCP11Q8WWU5 503 aa20.91■□□□□ 0.94
PNKP-213ENST00000599543 PRPF31Q8WWY3 499 aaKnown RBP20.91■□□□□ 0.94
PNKP-213ENST00000599543 TNFRSF25Q93038 417 aa20.91■□□□□ 0.94
PNKP-213ENST00000599543 TMEM169Q96HH4 297 aa20.91■□□□□ 0.94
PNKP-213ENST00000599543 DYDC2Q96IM9 177 aa20.91■□□□□ 0.94
PNKP-213ENST00000599543 AGPAT5Q9NUQ2 364 aa20.91■□□□□ 0.94
PNKP-213ENST00000599543 INPP5FQ9Y2H2 1132 aa20.91■□□□□ 0.94
PNKP-213ENST00000599543 WDFY4Q6ZS81 3184 aa20.9■□□□□ 0.94
PNKP-213ENST00000599543 CARNS1A5YM72 827 aa20.9■□□□□ 0.94
PNKP-213ENST00000599543 ST18O60284 1047 aa20.9■□□□□ 0.94
PNKP-213ENST00000599543 CA8P35219 290 aa20.9■□□□□ 0.94
PNKP-213ENST00000599543 TECP42680 631 aa20.9■□□□□ 0.94
PNKP-213ENST00000599543 RNASELQ05823 741 aaKnown RBP20.9■□□□□ 0.94
PNKP-213ENST00000599543 LAMTOR4Q0VGL1 99 aa20.9■□□□□ 0.94
PNKP-213ENST00000599543 BMS1Q14692 1282 aaKnown RBP20.9■□□□□ 0.94
PNKP-213ENST00000599543 CALCRLQ16602 461 aa20.9■□□□□ 0.94
PNKP-213ENST00000599543 HERC4Q5GLZ8 1057 aaPredicted RBP20.9■□□□□ 0.94
PNKP-213ENST00000599543 TMEM184AQ6ZMB5 413 aa20.9■□□□□ 0.94
PNKP-213ENST00000599543 SRGAP1Q7Z6B7 1085 aa20.9■□□□□ 0.94
PNKP-213ENST00000599543 TPH2Q8IWU9 490 aa20.9■□□□□ 0.94
PNKP-213ENST00000599543 PGBD4Q96DM1 585 aa20.9■□□□□ 0.94
PNKP-213ENST00000599543 MTRQ99707 1265 aa20.9■□□□□ 0.94
PNKP-213ENST00000599543 PHF7Q9BWX1 381 aaPredicted RBP20.9■□□□□ 0.94
PNKP-213ENST00000599543 NT5C1B-RDH14C9J2C7 533 aa20.89■□□□□ 0.93
PNKP-213ENST00000599543 ZNF623O75123 536 aa20.89■□□□□ 0.93
PNKP-213ENST00000599543 KCNC3Q14003 757 aa20.89■□□□□ 0.93
PNKP-213ENST00000599543 NOMO2Q5JPE7 1267 aa20.89■□□□□ 0.93
PNKP-213ENST00000599543 ANKRD54Q6NXT1 300 aa20.89■□□□□ 0.93
PNKP-213ENST00000599543 DIS3L2Q8IYB7 885 aaKnown RBP20.89■□□□□ 0.93
PNKP-213ENST00000599543 RNF149Q8NC42 400 aa20.89■□□□□ 0.93
PNKP-213ENST00000599543 TBC1D13Q9NVG8 400 aa20.89■□□□□ 0.93
PNKP-213ENST00000599543 PCDHA12Q9UN75 941 aa20.89■□□□□ 0.93
PNKP-213ENST00000599543 PCDHB2Q9Y5E7 798 aa20.89■□□□□ 0.93
PNKP-213ENST00000599543 TECTAO75443 2155 aa20.88■□□□□ 0.93
PNKP-213ENST00000599543 C2orf71A6NGG8 1288 aa20.88■□□□□ 0.93
PNKP-213ENST00000599543 BTBD18B2RXH4 712 aa20.88■□□□□ 0.93
PNKP-213ENST00000599543 LOC730098B7Z3J9 87 aa20.88■□□□□ 0.93
PNKP-213ENST00000599543 ASAP2O43150 1006 aa20.88■□□□□ 0.93
PNKP-213ENST00000599543 NEMFO60524 1076 aa20.88■□□□□ 0.93
PNKP-213ENST00000599543 CBX2Q14781 532 aaPredicted RBP20.88■□□□□ 0.93
PNKP-213ENST00000599543 FERMT3Q86UX7 667 aa20.88■□□□□ 0.93
PNKP-213ENST00000599543 MRPL43Q8N983 215 aaKnown RBP20.88■□□□□ 0.93
PNKP-213ENST00000599543 URGCPQ8TCY9 931 aa20.88■□□□□ 0.93
PNKP-213ENST00000599543 SUSD6Q92537 303 aa20.88■□□□□ 0.93
PNKP-213ENST00000599543 RPGRIP1Q96KN7 1286 aa20.88■□□□□ 0.93
PNKP-213ENST00000599543 CCDC43Q96MW1 224 aaKnown RBP20.88■□□□□ 0.93
PNKP-213ENST00000599543 EIF2AK1Q9BQI3 630 aaKnown RBP20.88■□□□□ 0.93
PNKP-213ENST00000599543 ZNF318Q5VUA4 2279 aa20.87■□□□□ 0.93
PNKP-213ENST00000599543 MEIS3P2A8K0S8 358 aa20.87■□□□□ 0.93
PNKP-213ENST00000599543 ZBTB39O15060 712 aa20.87■□□□□ 0.93
PNKP-213ENST00000599543 OFD1O75665 1012 aa20.87■□□□□ 0.93
PNKP-213ENST00000599543 ERLIN2O94905 339 aa20.87■□□□□ 0.93
PNKP-213ENST00000599543 VPS52Q8N1B4 723 aa20.87■□□□□ 0.93
PNKP-213ENST00000599543 CASP10Q92851 521 aa20.87■□□□□ 0.93
PNKP-213ENST00000599543 ZSCAN31Q96LW9 406 aaPredicted RBP20.87■□□□□ 0.93
PNKP-213ENST00000599543 GBP3Q9H0R5 595 aa20.87■□□□□ 0.93
PNKP-213ENST00000599543 TTC12Q9H892 705 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms