RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 NOMO2Q5JPE7 1267 aa23.75■■□□□ 1.39
PNKP-212ENST00000599454 RUFY3Q7L099 469 aa23.75■■□□□ 1.39
PNKP-212ENST00000599454 KREMEN2Q8NCW0 462 aa23.75■■□□□ 1.39
PNKP-212ENST00000599454 IGSF21Q96ID5 467 aa23.75■■□□□ 1.39
PNKP-212ENST00000599454 FAM105AQ9NUU6 356 aa23.75■■□□□ 1.39
PNKP-212ENST00000599454 DDX11L8A8MPP1 907 aa23.74■■□□□ 1.39
PNKP-212ENST00000599454 CPLX1O14810 134 aa23.74■■□□□ 1.39
PNKP-212ENST00000599454 DKC1O60832 514 aaKnown RBP eCLIP23.74■■□□□ 1.39
PNKP-212ENST00000599454 NONOQ15233 471 aaKnown RBP eCLIP23.74■■□□□ 1.39
PNKP-212ENST00000599454 KIAA1841Q6NSI8 718 aa23.74■■□□□ 1.39
PNKP-212ENST00000599454 CPLX2Q6PUV4 134 aaKnown RBP23.74■■□□□ 1.39
PNKP-212ENST00000599454 CATSPER4Q7RTX7 472 aa23.74■■□□□ 1.39
PNKP-212ENST00000599454 EXOC8Q8IYI6 725 aa23.74■■□□□ 1.39
PNKP-212ENST00000599454 PGBD4Q96DM1 585 aa23.74■■□□□ 1.39
PNKP-212ENST00000599454 ZNF274Q96GC6 653 aaPredicted RBP23.74■■□□□ 1.39
PNKP-212ENST00000599454 NRDE2Q9H7Z3 1164 aa23.74■■□□□ 1.39
PNKP-212ENST00000599454 TBC1D13Q9NVG8 400 aa23.74■■□□□ 1.39
PNKP-212ENST00000599454 PPME1Q9Y570 386 aa23.74■■□□□ 1.39
PNKP-212ENST00000599454 ARID2Q68CP9 1835 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 C2orf16Q68DN1 1984 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 TMEM150BA6NC51 233 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 C2CD4DB7Z1M9 353 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 GALTP07902 379 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 RNASELQ05823 741 aaKnown RBP23.73■■□□□ 1.39
PNKP-212ENST00000599454 TOB2Q14106 344 aaPredicted RBP23.73■■□□□ 1.39
PNKP-212ENST00000599454 ATAT1Q5SQI0 421 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 ANO5Q75V66 913 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 KRT25Q7Z3Z0 450 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 PPFIBP1Q86W92 1011 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 LPPQ93052 612 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 NLRP4Q96MN2 994 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 ZSWIM6Q9HCJ5 1215 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 DDX25Q9UHL0 483 aaKnown RBP23.73■■□□□ 1.39
PNKP-212ENST00000599454 CDH22Q9UJ99 828 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 USTQ9Y2C2 406 aa23.73■■□□□ 1.39
PNKP-212ENST00000599454 OFD1O75665 1012 aa23.72■■□□□ 1.39
PNKP-212ENST00000599454 RARS2Q5T160 578 aaKnown RBP23.72■■□□□ 1.39
PNKP-212ENST00000599454 TMEM173Q86WV6 379 aaPredicted RBP23.72■■□□□ 1.39
PNKP-212ENST00000599454 ZDHHC14Q8IZN3 488 aa23.72■■□□□ 1.39
PNKP-212ENST00000599454 PLCD3Q8N3E9 789 aa23.72■■□□□ 1.39
PNKP-212ENST00000599454 TDRD5Q8NAT2 981 aaKnown RBP23.72■■□□□ 1.39
PNKP-212ENST00000599454 SLC22A17Q8WUG5 538 aa23.72■■□□□ 1.39
PNKP-212ENST00000599454 SH2D3AQ9BRG2 576 aa23.72■■□□□ 1.39
PNKP-212ENST00000599454 CYP26B1Q9NR63 512 aa23.72■■□□□ 1.39
PNKP-212ENST00000599454 AGPAT5Q9NUQ2 364 aa23.72■■□□□ 1.39
PNKP-212ENST00000599454 CYP46A1Q9Y6A2 500 aa23.72■■□□□ 1.39
PNKP-212ENST00000599454 TDRD15B5MCY1 1934 aaKnown RBP23.71■■□□□ 1.39
PNKP-212ENST00000599454 ST18O60284 1047 aa23.71■■□□□ 1.39
PNKP-212ENST00000599454 QARSP47897 775 aaKnown RBP23.71■■□□□ 1.39
PNKP-212ENST00000599454 PPP2R5CQ13362 524 aa23.71■■□□□ 1.39
PNKP-212ENST00000599454 NPY5RQ15761 445 aa23.71■■□□□ 1.39
PNKP-212ENST00000599454 URGCPQ8TCY9 931 aa23.71■■□□□ 1.39
PNKP-212ENST00000599454 SLC7A3Q8WY07 619 aa23.71■■□□□ 1.39
PNKP-212ENST00000599454 FAM20AQ96MK3 541 aa23.71■■□□□ 1.39
PNKP-212ENST00000599454 INPP5FQ9Y2H2 1132 aa23.71■■□□□ 1.39
PNKP-212ENST00000599454 COL4A3BPQ9Y5P4 624 aa23.71■■□□□ 1.39
PNKP-212ENST00000599454 CNTNAP2Q9UHC6 1331 aa23.7■■□□□ 1.38
PNKP-212ENST00000599454 BRD1O95696 1058 aa23.7■■□□□ 1.38
PNKP-212ENST00000599454 PLA2G4FQ68DD2 849 aa23.7■■□□□ 1.38
PNKP-212ENST00000599454 SRGAP1Q7Z6B7 1085 aa23.7■■□□□ 1.38
PNKP-212ENST00000599454 KSR1Q8IVT5 923 aa23.7■■□□□ 1.38
PNKP-212ENST00000599454 IFT122Q9HBG6 1241 aa23.7■■□□□ 1.38
PNKP-212ENST00000599454 KANSL3Q9P2N6 904 aa23.7■■□□□ 1.38
PNKP-212ENST00000599454 DBR1Q9UK59 544 aaKnown RBP23.7■■□□□ 1.38
PNKP-212ENST00000599454 PCDHB2Q9Y5E7 798 aa23.7■■□□□ 1.38
PNKP-212ENST00000599454 PLXNA3P51805 1871 aa23.7■■□□□ 1.38
PNKP-212ENST00000599454 PTPRZ1P23471 2315 aaPredicted RBP23.69■■□□□ 1.38
PNKP-212ENST00000599454 MEIS3P2A8K0S8 358 aa23.69■■□□□ 1.38
PNKP-212ENST00000599454 GCFC2P16383 781 aaKnown RBP23.69■■□□□ 1.38
PNKP-212ENST00000599454 EPCAMP16422 314 aa23.69■■□□□ 1.38
PNKP-212ENST00000599454 RFC5P40937 340 aa23.69■■□□□ 1.38
PNKP-212ENST00000599454 INF2Q27J81 1249 aa23.69■■□□□ 1.38
PNKP-212ENST00000599454 LONRF3Q496Y0 759 aa23.69■■□□□ 1.38
PNKP-212ENST00000599454 CABP7Q86V35 215 aa23.69■■□□□ 1.38
PNKP-212ENST00000599454 C12orf76Q8N812 135 aaPredicted RBP23.69■■□□□ 1.38
PNKP-212ENST00000599454 PSPC1Q8WXF1 523 aaKnown RBP23.69■■□□□ 1.38
PNKP-212ENST00000599454 AUTS2Q8WXX7 1259 aa23.69■■□□□ 1.38
PNKP-212ENST00000599454 ATOH1Q92858 354 aaPredicted RBP23.69■■□□□ 1.38
PNKP-212ENST00000599454 EMILIN2Q9BXX0 1053 aa23.69■■□□□ 1.38
PNKP-212ENST00000599454 TM6SF1Q9BZW5 370 aa23.69■■□□□ 1.38
PNKP-212ENST00000599454 VAV3Q9UKW4 847 aa23.69■■□□□ 1.38
PNKP-212ENST00000599454 MTCL1Q9Y4B5 1905 aaKnown RBP23.69■■□□□ 1.38
PNKP-212ENST00000599454 SLC37A4O43826 429 aa23.68■■□□□ 1.38
PNKP-212ENST00000599454 GAS2O43903 313 aaKnown RBP23.68■■□□□ 1.38
PNKP-212ENST00000599454 PDGFBP01127 241 aaPredicted RBP23.68■■□□□ 1.38
PNKP-212ENST00000599454 P4HBP07237 508 aaKnown RBP23.68■■□□□ 1.38
PNKP-212ENST00000599454 SLC11A1P49279 550 aa23.68■■□□□ 1.38
PNKP-212ENST00000599454 PTPN14Q15678 1187 aa23.68■■□□□ 1.38
PNKP-212ENST00000599454 LETM2Q2VYF4 491 aa23.68■■□□□ 1.38
PNKP-212ENST00000599454 PPP4R3AQ6IN85 833 aa23.68■■□□□ 1.38
PNKP-212ENST00000599454 MRPL10Q7Z7H8 261 aaKnown RBP23.68■■□□□ 1.38
PNKP-212ENST00000599454 BCL7CQ8WUZ0 217 aaPredicted RBP23.68■■□□□ 1.38
PNKP-212ENST00000599454 TMEM175Q9BSA9 504 aa23.68■■□□□ 1.38
PNKP-212ENST00000599454 GBP3Q9H0R5 595 aa23.68■■□□□ 1.38
PNKP-212ENST00000599454 DHX33Q9H6R0 707 aaKnown RBP23.68■■□□□ 1.38
PNKP-212ENST00000599454 SFXN1Q9H9B4 322 aa23.68■■□□□ 1.38
PNKP-212ENST00000599454 KCNMB3Q9NPA1 279 aa23.68■■□□□ 1.38
PNKP-212ENST00000599454 DNAJB4Q9UDY4 337 aa23.68■■□□□ 1.38
PNKP-212ENST00000599454 ZFHX2Q9C0A1 2572 aaPredicted RBP23.67■■□□□ 1.38
PNKP-212ENST00000599454 CCDC194A0A1B0GVG4 234 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms