RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 REV3LO60673 3130 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 PPP6R2O75170 966 aa19.55■□□□□ 0.72
USHBP1-209ENST00000598570 YEATS4O95619 227 aa19.55■□□□□ 0.72
USHBP1-209ENST00000598570 BRD1O95696 1058 aa19.55■□□□□ 0.72
USHBP1-209ENST00000598570 SKIP12755 728 aa19.55■□□□□ 0.72
USHBP1-209ENST00000598570 NAMPTP43490 491 aa19.55■□□□□ 0.72
USHBP1-209ENST00000598570 ARSHQ5FYA8 562 aa19.55■□□□□ 0.72
USHBP1-209ENST00000598570 UBXN11Q5T124 520 aa19.55■□□□□ 0.72
USHBP1-209ENST00000598570 MYLIPQ8WY64 445 aa19.55■□□□□ 0.72
USHBP1-209ENST00000598570 CCDC51Q96ER9 411 aa19.55■□□□□ 0.72
USHBP1-209ENST00000598570 CCDC113Q9H0I3 377 aa19.55■□□□□ 0.72
USHBP1-209ENST00000598570 CSRNP2Q9H175 543 aa19.55■□□□□ 0.72
USHBP1-209ENST00000598570 C17orf75Q9HAS0 396 aa19.55■□□□□ 0.72
USHBP1-209ENST00000598570 BMP2KQ9NSY1 1161 aaPredicted RBP19.55■□□□□ 0.72
USHBP1-209ENST00000598570 NLRC5Q86WI3 1866 aa19.54■□□□□ 0.72
USHBP1-209ENST00000598570 TSPAN1O60635 241 aa19.54■□□□□ 0.72
USHBP1-209ENST00000598570 RB1P06400 928 aa19.54■□□□□ 0.72
USHBP1-209ENST00000598570 HSP90AA1P07900 732 aaKnown RBP19.54■□□□□ 0.72
USHBP1-209ENST00000598570 BMPR1AP36894 532 aa19.54■□□□□ 0.72
USHBP1-209ENST00000598570 UBA7P41226 1012 aa19.54■□□□□ 0.72
USHBP1-209ENST00000598570 USP49Q70CQ1 688 aa19.54■□□□□ 0.72
USHBP1-209ENST00000598570 CATSPER4Q7RTX7 472 aa19.54■□□□□ 0.72
USHBP1-209ENST00000598570 PRIMPOLQ96LW4 560 aa19.54■□□□□ 0.72
USHBP1-209ENST00000598570 ZNF396Q96N95 335 aaPredicted RBP19.54■□□□□ 0.72
USHBP1-209ENST00000598570 SCLT1Q96NL6 688 aa19.54■□□□□ 0.72
USHBP1-209ENST00000598570 RUSC1Q9BVN2 902 aa19.54■□□□□ 0.72
USHBP1-209ENST00000598570 A0A1B0GUA9 196 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 INPPL1O15357 1258 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 DDIT3P35638 169 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 RAB27AP51159 221 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 PPP2R5AQ15172 486 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 EPC2Q52LR7 807 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 NAALADL2Q58DX5 795 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 FAM102BQ5T8I3 360 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 TMEM192Q8IY95 271 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 FIBCD1Q8N539 461 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 KRI1Q8N9T8 703 aaKnown RBP19.53■□□□□ 0.72
USHBP1-209ENST00000598570 EPSTI1Q96J88 318 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 CCDC43Q96MW1 224 aaKnown RBP19.53■□□□□ 0.72
USHBP1-209ENST00000598570 CASD1Q96PB1 797 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 C17orf80Q9BSJ5 609 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 PLVAPQ9BX97 442 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 TMEM117Q9H0C3 514 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 RWDD3Q9Y3V2 267 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 PRUNE2Q8WUY3 3088 aa19.53■□□□□ 0.72
USHBP1-209ENST00000598570 PRRC2BQ5JSZ5 2229 aaKnown RBP19.53■□□□□ 0.72
USHBP1-209ENST00000598570 EYSQ5T1H1 3165 aa19.52■□□□□ 0.72
USHBP1-209ENST00000598570 H3BNC9 293 aa19.52■□□□□ 0.72
USHBP1-209ENST00000598570 HOXA2O43364 376 aa19.52■□□□□ 0.72
USHBP1-209ENST00000598570 PLA2G4BP0C869 781 aa19.52■□□□□ 0.72
USHBP1-209ENST00000598570 MARCKSP29966 332 aaPredicted RBP19.52■□□□□ 0.72
USHBP1-209ENST00000598570 P2RX5Q93086 422 aa19.52■□□□□ 0.72
USHBP1-209ENST00000598570 C2orf40Q9H1Z8 148 aa19.52■□□□□ 0.72
USHBP1-209ENST00000598570 FAM105AQ9NUU6 356 aa19.52■□□□□ 0.72
USHBP1-209ENST00000598570 RCOR1Q9UKL0 485 aa19.52■□□□□ 0.72
USHBP1-209ENST00000598570 MTCH2Q9Y6C9 303 aa19.52■□□□□ 0.72
USHBP1-209ENST00000598570 ARF4P18085 180 aaPredicted RBP19.51■□□□□ 0.71
USHBP1-209ENST00000598570 EFNA5P52803 228 aa19.51■□□□□ 0.71
USHBP1-209ENST00000598570 BTG3Q14201 252 aaPredicted RBP19.51■□□□□ 0.71
USHBP1-209ENST00000598570 CLLU1OSQ5K130 101 aa19.51■□□□□ 0.71
USHBP1-209ENST00000598570 AXDND1Q5T1B0 1012 aaPredicted RBP19.51■□□□□ 0.71
USHBP1-209ENST00000598570 LRRC55Q6ZSA7 311 aa19.51■□□□□ 0.71
USHBP1-209ENST00000598570 SPIRE2Q8WWL2 714 aa19.51■□□□□ 0.71
USHBP1-209ENST00000598570 ARNTL2Q8WYA1 636 aa19.51■□□□□ 0.71
USHBP1-209ENST00000598570 RAD54LQ92698 747 aa19.51■□□□□ 0.71
USHBP1-209ENST00000598570 CALML4Q96GE6 196 aa19.51■□□□□ 0.71
USHBP1-209ENST00000598570 CLIC6Q96NY7 704 aa19.51■□□□□ 0.71
USHBP1-209ENST00000598570 CWH43Q9H720 699 aa19.51■□□□□ 0.71
USHBP1-209ENST00000598570 PRMT7Q9NVM4 692 aaPredicted RBP19.51■□□□□ 0.71
USHBP1-209ENST00000598570 ARHGAP28Q9P2N2 729 aa19.51■□□□□ 0.71
USHBP1-209ENST00000598570 TFIP11Q9UBB9 837 aaKnown RBP19.51■□□□□ 0.71
USHBP1-209ENST00000598570 KCNG1Q9UIX4 513 aa19.51■□□□□ 0.71
USHBP1-209ENST00000598570 LRFN2Q9ULH4 789 aa19.51■□□□□ 0.71
USHBP1-209ENST00000598570 PIN4Q9Y237 131 aaKnown RBP19.51■□□□□ 0.71
USHBP1-209ENST00000598570 MRPL42Q9Y6G3 142 aaKnown RBP19.51■□□□□ 0.71
USHBP1-209ENST00000598570 RFXAPO00287 272 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 ACKR2O00590 384 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 SPTLC2O15270 562 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 FOSL2P15408 326 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 PLCG1P19174 1290 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 NCLP19338 710 aaKnown RBP19.5■□□□□ 0.71
USHBP1-209ENST00000598570 GATMP50440 423 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 ZNF131P52739 623 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 KARSQ15046 597 aaKnown RBP19.5■□□□□ 0.71
USHBP1-209ENST00000598570 SMG8Q8ND04 991 aaKnown RBP19.5■□□□□ 0.71
USHBP1-209ENST00000598570 CNNM3Q8NE01 707 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 SYMPKQ92797 1274 aaKnown RBP19.5■□□□□ 0.71
USHBP1-209ENST00000598570 DRC1Q96MC2 740 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 GAS2L1Q99501 681 aaPredicted RBP19.5■□□□□ 0.71
USHBP1-209ENST00000598570 TMEM134Q9H6X4 195 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 STK17AQ9UEE5 414 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 RBM19Q9Y4C8 960 aaKnown RBP19.5■□□□□ 0.71
USHBP1-209ENST00000598570 PCDHB2Q9Y5E7 798 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 KIAA1671Q9BY89 1806 aa19.5■□□□□ 0.71
USHBP1-209ENST00000598570 ZMYM2Q9UBW7 1377 aa19.49■□□□□ 0.71
USHBP1-209ENST00000598570 INO80B-WBP1J3KQ70 363 aa19.49■□□□□ 0.71
USHBP1-209ENST00000598570 HIP1RO75146 1068 aa19.49■□□□□ 0.71
USHBP1-209ENST00000598570 FGFR1P11362 822 aa19.49■□□□□ 0.71
USHBP1-209ENST00000598570 NPTX2P47972 431 aa19.49■□□□□ 0.71
USHBP1-209ENST00000598570 NOTUMQ6P988 496 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms