RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 MRPL9Q9BYD2 267 aaKnown RBP18.51■□□□□ 0.55
USHBP1-208ENST00000598309 TYW1Q9NV66 732 aaKnown RBP18.51■□□□□ 0.55
USHBP1-208ENST00000598309 KIAA1671Q9BY89 1806 aa18.51■□□□□ 0.55
USHBP1-208ENST00000598309 A0A087WWV3 80 aa18.5■□□□□ 0.55
USHBP1-208ENST00000598309 ARHGEF35A5YM69 484 aa18.5■□□□□ 0.55
USHBP1-208ENST00000598309 ERLIN2O94905 339 aa18.5■□□□□ 0.55
USHBP1-208ENST00000598309 ITGB1P05556 798 aa18.5■□□□□ 0.55
USHBP1-208ENST00000598309 CYP11B2P19099 503 aa18.5■□□□□ 0.55
USHBP1-208ENST00000598309 UBE3AQ05086 875 aa18.5■□□□□ 0.55
USHBP1-208ENST00000598309 SPOUT1Q5T280 376 aaKnown RBP18.5■□□□□ 0.55
USHBP1-208ENST00000598309 KRT79Q5XKE5 535 aa18.5■□□□□ 0.55
USHBP1-208ENST00000598309 ARL6IP4Q66PJ3 421 aaKnown RBP18.5■□□□□ 0.55
USHBP1-208ENST00000598309 PADI6Q6TGC4 694 aa18.5■□□□□ 0.55
USHBP1-208ENST00000598309 RNF169Q8NCN4 708 aa18.5■□□□□ 0.55
USHBP1-208ENST00000598309 SNX29Q8TEQ0 813 aa18.5■□□□□ 0.55
USHBP1-208ENST00000598309 CCDC51Q96ER9 411 aa18.5■□□□□ 0.55
USHBP1-208ENST00000598309 COL25A1Q9BXS0 654 aaPredicted RBP18.5■□□□□ 0.55
USHBP1-208ENST00000598309 CWH43Q9H720 699 aa18.5■□□□□ 0.55
USHBP1-208ENST00000598309 AXLP30530 894 aa18.49■□□□□ 0.55
USHBP1-208ENST00000598309 HOXA11P31270 313 aaPredicted RBP18.49■□□□□ 0.55
USHBP1-208ENST00000598309 MBTD1Q05BQ5 628 aa18.49■□□□□ 0.55
USHBP1-208ENST00000598309 COL19A1Q14993 1142 aa18.49■□□□□ 0.55
USHBP1-208ENST00000598309 IL17AQ16552 155 aa18.49■□□□□ 0.55
USHBP1-208ENST00000598309 COLGALT1Q8NBJ5 622 aa18.49■□□□□ 0.55
USHBP1-208ENST00000598309 SPPL3Q8TCT6 385 aa18.49■□□□□ 0.55
USHBP1-208ENST00000598309 ALG13Q9NP73 1137 aaKnown RBP18.49■□□□□ 0.55
USHBP1-208ENST00000598309 A0A0C4DFX4 3053 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 INO80B-WBP1J3KQ70 363 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 K7ELQ4 463 aaPredicted RBP18.48■□□□□ 0.55
USHBP1-208ENST00000598309 NCK2O43639 380 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 TSPAN1O60635 241 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 BMP15O95972 392 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 TFF2Q03403 129 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 NCBP1Q09161 790 aaKnown RBP18.48■□□□□ 0.55
USHBP1-208ENST00000598309 CAMK1Q14012 370 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 ECM1Q16610 540 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 TCEAL5Q5H9L2 206 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 CDCA2Q69YH5 1023 aaPredicted RBP18.48■□□□□ 0.55
USHBP1-208ENST00000598309 LRRC55Q6ZSA7 311 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 KCTD17Q8N5Z5 321 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 HELQQ8TDG4 1101 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 PGBD4Q96DM1 585 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 BHMT2Q9H2M3 363 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 UBE2ZQ9H832 354 aaPredicted RBP18.48■□□□□ 0.55
USHBP1-208ENST00000598309 GPRC5CQ9NQ84 441 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 DDX19AQ9NUU7 478 aaKnown RBP18.48■□□□□ 0.55
USHBP1-208ENST00000598309 HCSTQ9UBK5 93 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 KIAA1024Q9UPX6 916 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 PCDHB2Q9Y5E7 798 aa18.48■□□□□ 0.55
USHBP1-208ENST00000598309 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.47■□□□□ 0.55
USHBP1-208ENST00000598309 CARNS1A5YM72 827 aa18.47■□□□□ 0.55
USHBP1-208ENST00000598309 PPM1AP35813 382 aa18.47■□□□□ 0.55
USHBP1-208ENST00000598309 UBXN11Q5T124 520 aa18.47■□□□□ 0.55
USHBP1-208ENST00000598309 NOTUMQ6P988 496 aa18.47■□□□□ 0.55
USHBP1-208ENST00000598309 GLB1LQ6UWU2 654 aa18.47■□□□□ 0.55
USHBP1-208ENST00000598309 MRPL10Q7Z7H8 261 aaKnown RBP18.47■□□□□ 0.55
USHBP1-208ENST00000598309 THNSL1Q8IYQ7 743 aa18.47■□□□□ 0.55
USHBP1-208ENST00000598309 CNNM3Q8NE01 707 aa18.47■□□□□ 0.55
USHBP1-208ENST00000598309 SNX21Q969T3 373 aa18.47■□□□□ 0.55
USHBP1-208ENST00000598309 ZNF558Q96NG5 402 aa18.47■□□□□ 0.55
USHBP1-208ENST00000598309 LZTS1Q9Y250 596 aa18.47■□□□□ 0.55
USHBP1-208ENST00000598309 CNTNAP2Q9UHC6 1331 aa18.47■□□□□ 0.55
USHBP1-208ENST00000598309 CUL9Q8IWT3 2517 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 VPS37CA5D8V6 355 aaPredicted RBP18.46■□□□□ 0.55
USHBP1-208ENST00000598309 LRRIQ4A6NIV6 560 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 PP2D1A8MPX8 630 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 FGF18O76093 207 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 EYA4O95677 639 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 DNAJB1P25685 340 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 PLCB3Q01970 1234 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 PPP2R5AQ15172 486 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 AMHR2Q16671 573 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 HYIQ5T013 277 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 PPP4R3CPQ6ZMV5 832 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 MAEAQ7L5Y9 396 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 POF1BQ8WVV4 589 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 KIFAP3Q92845 792 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 LPPQ93052 612 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 PPP2R3CQ969Q6 453 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 PABPC5Q96DU9 382 aaKnown RBP18.46■□□□□ 0.55
USHBP1-208ENST00000598309 PRIMPOLQ96LW4 560 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 MMTAG2Q9BU76 263 aaKnown RBP18.46■□□□□ 0.55
USHBP1-208ENST00000598309 C2orf40Q9H1Z8 148 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 DNM3Q9UQ16 869 aa18.46■□□□□ 0.55
USHBP1-208ENST00000598309 VWA3AA6NCI4 1184 aa18.45■□□□□ 0.54
USHBP1-208ENST00000598309 SLC26A4O43511 780 aa18.45■□□□□ 0.54
USHBP1-208ENST00000598309 NCLP19338 710 aaKnown RBP18.45■□□□□ 0.54
USHBP1-208ENST00000598309 NOMO2Q5JPE7 1267 aa18.45■□□□□ 0.54
USHBP1-208ENST00000598309 KCNT2Q6UVM3 1135 aa18.45■□□□□ 0.54
USHBP1-208ENST00000598309 ZBTB8OSQ8IWT0 167 aa18.45■□□□□ 0.54
USHBP1-208ENST00000598309 AK8Q96MA6 479 aa18.45■□□□□ 0.54
USHBP1-208ENST00000598309 CSRNP2Q9H175 543 aa18.45■□□□□ 0.54
USHBP1-208ENST00000598309 PRMT7Q9NVM4 692 aaPredicted RBP18.45■□□□□ 0.54
USHBP1-208ENST00000598309 BRWD1Q9NSI6 2320 aa18.45■□□□□ 0.54
USHBP1-208ENST00000598309 MEIS3P2A8K0S8 358 aa18.44■□□□□ 0.54
USHBP1-208ENST00000598309 OFD1O75665 1012 aa18.44■□□□□ 0.54
USHBP1-208ENST00000598309 BMP1P13497 986 aa18.44■□□□□ 0.54
USHBP1-208ENST00000598309 ARF4P18085 180 aaPredicted RBP18.44■□□□□ 0.54
USHBP1-208ENST00000598309 SYT1P21579 422 aa18.44■□□□□ 0.54
USHBP1-208ENST00000598309 CDC25AP30304 524 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms