RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 EYSQ5T1H1 3165 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 NPHP3-ACAD11A0A0J9YXS1 232 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 LINC01553A4QN01 128 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 INO80B-WBP1J3KQ70 363 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 HIP1RO75146 1068 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 DGKIO75912 1065 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 ZSCAN20P17040 1043 aaPredicted RBP16.59■□□□□ 0.25
SCN1B-204ENST00000596348 ATF7P17544 494 aaPredicted RBP16.59■□□□□ 0.25
SCN1B-204ENST00000596348 GUCY2CP25092 1073 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 RAD51AP2Q09MP3 1159 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 MCM6Q14566 821 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 NAALADL2Q58DX5 795 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 ARSHQ5FYA8 562 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 AXDND1Q5T1B0 1012 aaPredicted RBP16.59■□□□□ 0.25
SCN1B-204ENST00000596348 CDCA2Q69YH5 1023 aaPredicted RBP16.59■□□□□ 0.25
SCN1B-204ENST00000596348 RASSF8Q8NHQ8 419 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 RAD54LQ92698 747 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 KIFAP3Q92845 792 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 ZNF689Q96CS4 500 aaPredicted RBP16.59■□□□□ 0.25
SCN1B-204ENST00000596348 KIFC3Q9BVG8 833 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 CHST12Q9NRB3 414 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 NLRC5Q86WI3 1866 aa16.59■□□□□ 0.25
SCN1B-204ENST00000596348 MYO7AQ13402 2215 aa16.58■□□□□ 0.25
SCN1B-204ENST00000596348 PRRC2BQ5JSZ5 2229 aaKnown RBP16.58■□□□□ 0.25
SCN1B-204ENST00000596348 EPOPA6NHQ4 379 aa16.58■□□□□ 0.24
SCN1B-204ENST00000596348 B4GALT5O43286 388 aa16.58■□□□□ 0.24
SCN1B-204ENST00000596348 TSPAN1O60635 241 aa16.58■□□□□ 0.24
SCN1B-204ENST00000596348 NAMPTP43490 491 aa16.58■□□□□ 0.24
SCN1B-204ENST00000596348 DHX8Q14562 1220 aaKnown RBP16.58■□□□□ 0.24
SCN1B-204ENST00000596348 ECHDC2Q86YB7 292 aa16.58■□□□□ 0.24
SCN1B-204ENST00000596348 PRDM12Q9H4Q4 367 aa16.58■□□□□ 0.24
SCN1B-204ENST00000596348 CERS4Q9HA82 394 aa16.58■□□□□ 0.24
SCN1B-204ENST00000596348 RNF19AQ9NV58 838 aa16.58■□□□□ 0.24
SCN1B-204ENST00000596348 RCOR1Q9UKL0 485 aa16.58■□□□□ 0.24
SCN1B-204ENST00000596348 PRUNE2Q8WUY3 3088 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 KIAA1671Q9BY89 1806 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 A0A0U1RQF3 1178 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 TTLL13PA6NNM8 815 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 SFI1A8K8P3 1242 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 CUTAO60888 179 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 LINC00271P0C7V0 271 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 STAG3L1P0CL83 205 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 FGFR1P11362 822 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
SCN1B-204ENST00000596348 UBXN11Q5T124 520 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 TWF2Q6IBS0 349 aaKnown RBP16.57■□□□□ 0.24
SCN1B-204ENST00000596348 SHC4Q6S5L8 630 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 ZNF598Q86UK7 904 aaKnown RBP16.57■□□□□ 0.24
SCN1B-204ENST00000596348 GPBP1Q86WP2 473 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 KCNG4Q8TDN1 519 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 CDX2Q99626 313 aaPredicted RBP16.57■□□□□ 0.24
SCN1B-204ENST00000596348 TRAIPQ9BWF2 469 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 CCDC113Q9H0I3 377 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 TMEM161AQ9NX61 479 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 DACT1Q9NYF0 836 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 CFAP45Q9UL16 551 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 LRFN2Q9ULH4 789 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 PCDHA7Q9UN72 937 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 PCDHB7Q9Y5E2 793 aa16.57■□□□□ 0.24
SCN1B-204ENST00000596348 COL4A4P53420 1690 aaPredicted RBP16.56■□□□□ 0.24
SCN1B-204ENST00000596348 ERLIN2O94905 339 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 EDN1P05305 212 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 ARF4P18085 180 aaPredicted RBP16.56■□□□□ 0.24
SCN1B-204ENST00000596348 TXLNAP40222 546 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 NPTX2P47972 431 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 PEX3P56589 373 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 PPP2R5AQ15172 486 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 PCBP1Q15365 356 aaKnown RBP eCLIP16.56■□□□□ 0.24
SCN1B-204ENST00000596348 DEPTORQ8TB45 409 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 LEO1Q8WVC0 666 aaPredicted RBP16.56■□□□□ 0.24
SCN1B-204ENST00000596348 MYLIPQ8WY64 445 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 LARP4BQ92615 738 aaKnown RBP16.56■□□□□ 0.24
SCN1B-204ENST00000596348 CPB2Q96IY4 423 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 IFT74Q96LB3 600 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 DRC1Q96MC2 740 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 REEP2Q9BRK0 252 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 C17orf80Q9BSJ5 609 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 TIPINQ9BVW5 301 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 PANK2Q9BZ23 570 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 FZD8Q9H461 694 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 ELAC1Q9H777 363 aaKnown RBP16.56■□□□□ 0.24
SCN1B-204ENST00000596348 KCND2Q9NZV8 630 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 STK17AQ9UEE5 414 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 CCDC39Q9UFE4 941 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 MTUS1Q9ULD2 1270 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 USP20Q9Y2K6 914 aa16.56■□□□□ 0.24
SCN1B-204ENST00000596348 RALGAPA2Q2PPJ7 1873 aa16.55■□□□□ 0.24
SCN1B-204ENST00000596348 MEIS3P2A8K0S8 358 aa16.55■□□□□ 0.24
SCN1B-204ENST00000596348 RFXAPO00287 272 aa16.55■□□□□ 0.24
SCN1B-204ENST00000596348 NCLP19338 710 aaKnown RBP16.55■□□□□ 0.24
SCN1B-204ENST00000596348 ME1P48163 572 aa16.55■□□□□ 0.24
SCN1B-204ENST00000596348 ERVK-21P61565 698 aa16.55■□□□□ 0.24
SCN1B-204ENST00000596348 PAN2Q504Q3 1202 aaKnown RBP16.55■□□□□ 0.24
SCN1B-204ENST00000596348 CLLU1OSQ5K130 101 aa16.55■□□□□ 0.24
SCN1B-204ENST00000596348 RRAGBQ5VZM2 374 aa16.55■□□□□ 0.24
SCN1B-204ENST00000596348 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
SCN1B-204ENST00000596348 ZBTB8OSQ8IWT0 167 aa16.55■□□□□ 0.24
SCN1B-204ENST00000596348 PDILTQ8N807 584 aa16.55■□□□□ 0.24
SCN1B-204ENST00000596348 RNF169Q8NCN4 708 aa16.55■□□□□ 0.24
SCN1B-204ENST00000596348 ARNTL2Q8WYA1 636 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms