RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 MRPS5P82675 430 aaKnown RBP17.53■□□□□ 0.4
ZNF550-207ENST00000595560 CLLU1OSQ5K130 101 aa17.53■□□□□ 0.4
ZNF550-207ENST00000595560 ARL6IP4Q66PJ3 421 aaKnown RBP17.53■□□□□ 0.4
ZNF550-207ENST00000595560 PADI6Q6TGC4 694 aa17.53■□□□□ 0.4
ZNF550-207ENST00000595560 LRRC43Q8N309 656 aa17.53■□□□□ 0.4
ZNF550-207ENST00000595560 RNF169Q8NCN4 708 aa17.53■□□□□ 0.4
ZNF550-207ENST00000595560 AAASQ9NRG9 546 aa17.53■□□□□ 0.4
ZNF550-207ENST00000595560 FAM105AQ9NUU6 356 aa17.53■□□□□ 0.4
ZNF550-207ENST00000595560 TYW1Q9NV66 732 aaKnown RBP17.53■□□□□ 0.4
ZNF550-207ENST00000595560 PLAGL2Q9UPG8 496 aa17.53■□□□□ 0.4
ZNF550-207ENST00000595560 ZNF623O75123 536 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 ERLIN2O94905 339 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 ITGB1P05556 798 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 LAG3P18627 525 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 MBTD1Q05BQ5 628 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 CSPP1Q1MSJ5 1256 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 TJAP1Q5JTD0 557 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 KRT79Q5XKE5 535 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 KLHL23Q8NBE8 558 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 ASB2Q96Q27 587 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 NSUN3Q9H649 340 aaKnown RBP17.52■□□□□ 0.4
ZNF550-207ENST00000595560 CWH43Q9H720 699 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 ALG13Q9NP73 1137 aaKnown RBP17.52■□□□□ 0.4
ZNF550-207ENST00000595560 GPRC5CQ9NQ84 441 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 DDX19AQ9NUU7 478 aaKnown RBP17.52■□□□□ 0.4
ZNF550-207ENST00000595560 HCSTQ9UBK5 93 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 KIAA1024Q9UPX6 916 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 PCDHB12Q9Y5F1 795 aa17.52■□□□□ 0.4
ZNF550-207ENST00000595560 TTC28Q96AY4 2481 aa17.52■□□□□ 0.39
ZNF550-207ENST00000595560 VPS37CA5D8V6 355 aaPredicted RBP17.51■□□□□ 0.39
ZNF550-207ENST00000595560 PP2D1A8MPX8 630 aa17.51■□□□□ 0.39
ZNF550-207ENST00000595560 INO80B-WBP1J3KQ70 363 aa17.51■□□□□ 0.39
ZNF550-207ENST00000595560 TSPAN1O60635 241 aa17.51■□□□□ 0.39
ZNF550-207ENST00000595560 CYP11B2P19099 503 aa17.51■□□□□ 0.39
ZNF550-207ENST00000595560 AXLP30530 894 aa17.51■□□□□ 0.39
ZNF550-207ENST00000595560 AAK1Q2M2I8 961 aa17.51■□□□□ 0.39
ZNF550-207ENST00000595560 SPOUT1Q5T280 376 aaKnown RBP17.51■□□□□ 0.39
ZNF550-207ENST00000595560 LRRC55Q6ZSA7 311 aa17.51■□□□□ 0.39
ZNF550-207ENST00000595560 COLGALT1Q8NBJ5 622 aa17.51■□□□□ 0.39
ZNF550-207ENST00000595560 HELQQ8TDG4 1101 aa17.51■□□□□ 0.39
ZNF550-207ENST00000595560 HLA-CQ95604 372 aa17.51■□□□□ 0.39
ZNF550-207ENST00000595560 SNX21Q969T3 373 aa17.51■□□□□ 0.39
ZNF550-207ENST00000595560 MRPL9Q9BYD2 267 aaKnown RBP17.51■□□□□ 0.39
ZNF550-207ENST00000595560 BHMT2Q9H2M3 363 aa17.51■□□□□ 0.39
ZNF550-207ENST00000595560 BMP15O95972 392 aa17.5■□□□□ 0.39
ZNF550-207ENST00000595560 TFF2Q03403 129 aa17.5■□□□□ 0.39
ZNF550-207ENST00000595560 CAMK1Q14012 370 aa17.5■□□□□ 0.39
ZNF550-207ENST00000595560 AMHR2Q16671 573 aa17.5■□□□□ 0.39
ZNF550-207ENST00000595560 CDCA2Q69YH5 1023 aaPredicted RBP17.5■□□□□ 0.39
ZNF550-207ENST00000595560 MAEAQ7L5Y9 396 aa17.5■□□□□ 0.39
ZNF550-207ENST00000595560 SPPL3Q8TCT6 385 aa17.5■□□□□ 0.39
ZNF550-207ENST00000595560 CCDC51Q96ER9 411 aa17.5■□□□□ 0.39
ZNF550-207ENST00000595560 MMTAG2Q9BU76 263 aaKnown RBP17.5■□□□□ 0.39
ZNF550-207ENST00000595560 COL25A1Q9BXS0 654 aaPredicted RBP17.5■□□□□ 0.39
ZNF550-207ENST00000595560 PCDHB2Q9Y5E7 798 aa17.5■□□□□ 0.39
ZNF550-207ENST00000595560 VWA3AA6NCI4 1184 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 LRRIQ4A6NIV6 560 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 DLL1O00548 723 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 EYA4O95677 639 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 SYT1P21579 422 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 DNAJB1P25685 340 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 CDC25AP30304 524 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 UBE3AQ05086 875 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 NCBP1Q09161 790 aaKnown RBP17.49■□□□□ 0.39
ZNF550-207ENST00000595560 COL19A1Q14993 1142 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 TCEAL5Q5H9L2 206 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 HYIQ5T013 277 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 UBXN11Q5T124 520 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 NOTUMQ6P988 496 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 GLB1LQ6UWU2 654 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 MRPL10Q7Z7H8 261 aaKnown RBP17.49■□□□□ 0.39
ZNF550-207ENST00000595560 KCTD17Q8N5Z5 321 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 POF1BQ8WVV4 589 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 SYMPKQ92797 1274 aaKnown RBP17.49■□□□□ 0.39
ZNF550-207ENST00000595560 LPPQ93052 612 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 PGBD4Q96DM1 585 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 DNM3Q9UQ16 869 aa17.49■□□□□ 0.39
ZNF550-207ENST00000595560 CNTNAP2Q9UHC6 1331 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 MEIS3P2A8K0S8 358 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 FGF18O76093 207 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 ARF4P18085 180 aaPredicted RBP17.48■□□□□ 0.39
ZNF550-207ENST00000595560 PPM1AP35813 382 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 NAMPTP43490 491 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 PPP2R5AQ15172 486 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 PPP4R3CPQ6ZMV5 832 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 THNSL1Q8IYQ7 743 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 CNNM3Q8NE01 707 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 BSNDQ8WZ55 320 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 KIFAP3Q92845 792 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 PRIMPOLQ96LW4 560 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 AK8Q96MA6 479 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 ZNF558Q96NG5 402 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 NT5C3AQ9H0P0 336 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 UBE2ZQ9H832 354 aaPredicted RBP17.48■□□□□ 0.39
ZNF550-207ENST00000595560 MYH15Q9Y2K3 1946 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 NCOR1O75376 2440 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 MYH11P35749 1972 aa17.48■□□□□ 0.39
ZNF550-207ENST00000595560 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.47■□□□□ 0.39
ZNF550-207ENST00000595560 E9PMD0 336 aa17.47■□□□□ 0.39
ZNF550-207ENST00000595560 NCLP19338 710 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms