RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PPM1AP35813 382 aa26.17■■□□□ 1.78
LSM4-204ENST00000594828 RBM25P49756 843 aaKnown RBP26.17■■□□□ 1.78
LSM4-204ENST00000594828 NDUFV1P49821 464 aa26.17■■□□□ 1.78
LSM4-204ENST00000594828 RAB27AP51159 221 aa26.17■■□□□ 1.78
LSM4-204ENST00000594828 KRT17Q04695 432 aa26.17■■□□□ 1.78
LSM4-204ENST00000594828 RNF149Q8NC42 400 aa26.17■■□□□ 1.78
LSM4-204ENST00000594828 C1QTNF1Q9BXJ1 281 aa26.17■■□□□ 1.78
LSM4-204ENST00000594828 MINDY3Q9H8M7 445 aa26.17■■□□□ 1.78
LSM4-204ENST00000594828 AGPAT5Q9NUQ2 364 aa26.17■■□□□ 1.78
LSM4-204ENST00000594828 SPG21Q9NZD8 308 aa26.17■■□□□ 1.78
LSM4-204ENST00000594828 POTEMA6NI47 508 aa26.16■■□□□ 1.78
LSM4-204ENST00000594828 ZNF623O75123 536 aa26.16■■□□□ 1.78
LSM4-204ENST00000594828 DGAT1O75907 488 aa26.16■■□□□ 1.78
LSM4-204ENST00000594828 SSTR3P32745 418 aaPredicted RBP26.16■■□□□ 1.78
LSM4-204ENST00000594828 PBX3P40426 434 aa26.16■■□□□ 1.78
LSM4-204ENST00000594828 MXD4Q14582 209 aaPredicted RBP26.16■■□□□ 1.78
LSM4-204ENST00000594828 LONRF3Q496Y0 759 aa26.16■■□□□ 1.78
LSM4-204ENST00000594828 RSPH1Q8WYR4 309 aa26.16■■□□□ 1.78
LSM4-204ENST00000594828 LPPQ93052 612 aa26.16■■□□□ 1.78
LSM4-204ENST00000594828 CCDC43Q96MW1 224 aaKnown RBP26.16■■□□□ 1.78
LSM4-204ENST00000594828 EPHX3Q9H6B9 360 aa26.16■■□□□ 1.78
LSM4-204ENST00000594828 XPNPEP1Q9NQW7 623 aa26.16■■□□□ 1.78
LSM4-204ENST00000594828 CD207Q9UJ71 328 aa26.16■■□□□ 1.78
LSM4-204ENST00000594828 NCOR1O75376 2440 aa26.15■■□□□ 1.78
LSM4-204ENST00000594828 PER2O15055 1255 aa26.15■■□□□ 1.78
LSM4-204ENST00000594828 XRCC6P12956 609 aaKnown RBP eCLIP26.15■■□□□ 1.78
LSM4-204ENST00000594828 GNL2Q13823 731 aaKnown RBP26.15■■□□□ 1.78
LSM4-204ENST00000594828 ZNF174Q15697 407 aa26.15■■□□□ 1.78
LSM4-204ENST00000594828 PIGOQ8TEQ8 1089 aa26.15■■□□□ 1.78
LSM4-204ENST00000594828 PRKAG3Q9UGI9 489 aa26.15■■□□□ 1.78
LSM4-204ENST00000594828 PCDHB2Q9Y5E7 798 aa26.15■■□□□ 1.78
LSM4-204ENST00000594828 FSCN2O14926 492 aa26.14■■□□□ 1.78
LSM4-204ENST00000594828 MBTPS2O43462 519 aa26.14■■□□□ 1.78
LSM4-204ENST00000594828 ALDH7A1P49419 539 aaKnown RBP26.14■■□□□ 1.78
LSM4-204ENST00000594828 ORC2Q13416 577 aaPredicted RBP26.14■■□□□ 1.78
LSM4-204ENST00000594828 GLB1LQ6UWU2 654 aa26.14■■□□□ 1.78
LSM4-204ENST00000594828 KHSRPQ92945 711 aaKnown RBP eCLIP26.14■■□□□ 1.78
LSM4-204ENST00000594828 PGBD4Q96DM1 585 aa26.14■■□□□ 1.78
LSM4-204ENST00000594828 A0A087WWV3 80 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 HOXA11P31270 313 aaPredicted RBP26.13■■□□□ 1.77
LSM4-204ENST00000594828 TECP42680 631 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 RARRES1P49788 294 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 BCAR1P56945 870 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 SMAD4Q13485 552 aaKnown RBP26.13■■□□□ 1.77
LSM4-204ENST00000594828 TFDP1Q14186 410 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 RABEP1Q15276 862 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 SMAD2Q15796 467 aaKnown RBP26.13■■□□□ 1.77
LSM4-204ENST00000594828 PLPP4Q5VZY2 271 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 NOSTRINQ8IVI9 506 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 SLC39A11Q8N1S5 342 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 MSLNLQ96KJ4 702 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 CDCA3Q99618 268 aaPredicted RBP26.13■■□□□ 1.77
LSM4-204ENST00000594828 TCF25Q9BQ70 676 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 TUFT1Q9NNX1 390 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 NGRNQ9NPE2 291 aaKnown RBP26.13■■□□□ 1.77
LSM4-204ENST00000594828 ENTPD7Q9NQZ7 604 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 CLEC1BQ9P126 229 aa26.13■■□□□ 1.77
LSM4-204ENST00000594828 ARID2Q68CP9 1835 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 FSD2A1L4K1 749 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 MEIS3P2A8K0S8 358 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 OFD1O75665 1012 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 OR52Z1P0C646 297 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 SPATA31C1P0DKV0 1188 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 ARL2P36404 184 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 PTENP60484 403 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 POU5F1BQ06416 359 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 PCBP1Q15365 356 aaKnown RBP eCLIP26.12■■□□□ 1.77
LSM4-204ENST00000594828 DUSP6Q16828 381 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 NOMO2Q5JPE7 1267 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 TTC38Q5R3I4 469 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 CATSPER3Q86XQ3 398 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 INPP5FQ9Y2H2 1132 aa26.12■■□□□ 1.77
LSM4-204ENST00000594828 NT5C1B-RDH14C9J2C7 533 aa26.11■■□□□ 1.77
LSM4-204ENST00000594828 ERLIN2O94905 339 aa26.11■■□□□ 1.77
LSM4-204ENST00000594828 GLP2RO95838 553 aa26.11■■□□□ 1.77
LSM4-204ENST00000594828 ZP2Q05996 745 aa26.11■■□□□ 1.77
LSM4-204ENST00000594828 TMC7Q7Z402 723 aa26.11■■□□□ 1.77
LSM4-204ENST00000594828 MRPL10Q7Z7H8 261 aaKnown RBP26.11■■□□□ 1.77
LSM4-204ENST00000594828 ADHFE1Q8IWW8 467 aa26.11■■□□□ 1.77
LSM4-204ENST00000594828 ERMNQ8TAM6 284 aa26.11■■□□□ 1.77
LSM4-204ENST00000594828 TBC1D13Q9NVG8 400 aa26.11■■□□□ 1.77
LSM4-204ENST00000594828 BARX2Q9UMQ3 279 aaPredicted RBP26.11■■□□□ 1.77
LSM4-204ENST00000594828 NOL7Q9UMY1 257 aaKnown RBP26.11■■□□□ 1.77
LSM4-204ENST00000594828 BDP1A6H8Y1 2624 aa26.11■■□□□ 1.77
LSM4-204ENST00000594828 PI4K2BG5E9Z4 385 aa26.1■■□□□ 1.77
LSM4-204ENST00000594828 ST18O60284 1047 aa26.1■■□□□ 1.77
LSM4-204ENST00000594828 ZC3H11AO75152 810 aaKnown RBP eCLIP26.1■■□□□ 1.77
LSM4-204ENST00000594828 EYA4O95677 639 aa26.1■■□□□ 1.77
LSM4-204ENST00000594828 TRAPPC10P48553 1259 aa26.1■■□□□ 1.77
LSM4-204ENST00000594828 RNASELQ05823 741 aaKnown RBP26.1■■□□□ 1.77
LSM4-204ENST00000594828 NCBP1Q09161 790 aaKnown RBP26.1■■□□□ 1.77
LSM4-204ENST00000594828 COASYQ13057 564 aa26.1■■□□□ 1.77
LSM4-204ENST00000594828 UBXN11Q5T124 520 aa26.1■■□□□ 1.77
LSM4-204ENST00000594828 ASAP3Q8TDY4 903 aa26.1■■□□□ 1.77
LSM4-204ENST00000594828 NACC1Q96RE7 527 aa26.1■■□□□ 1.77
LSM4-204ENST00000594828 POLR3CQ9BUI4 534 aaPredicted RBP26.1■■□□□ 1.77
LSM4-204ENST00000594828 CARNS1A5YM72 827 aa26.09■■□□□ 1.77
LSM4-204ENST00000594828 INO80B-WBP1J3KQ70 363 aa26.09■■□□□ 1.77
LSM4-204ENST00000594828 MED24O75448 989 aa26.09■■□□□ 1.77
LSM4-204ENST00000594828 AXLP30530 894 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms