RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 MMTAG2Q9BU76 263 aaKnown RBP20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 COL25A1Q9BXS0 654 aaPredicted RBP20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 RAB34Q9BZG1 259 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 POLR3FQ9H1D9 316 aaPredicted RBP20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 FAM105AQ9NUU6 356 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 KIAA1024Q9UPX6 916 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 DLL1O00548 723 aa20.53■□□□□ 0.88
SHKBP1-202ENST00000593764 CYP11B2P19099 503 aa20.53■□□□□ 0.88
SHKBP1-202ENST00000593764 MRPS5P82675 430 aaKnown RBP20.53■□□□□ 0.88
SHKBP1-202ENST00000593764 TFDP1Q14186 410 aa20.53■□□□□ 0.88
SHKBP1-202ENST00000593764 MCPH1Q8NEM0 835 aa20.53■□□□□ 0.88
SHKBP1-202ENST00000593764 SNX29Q8TEQ0 813 aa20.53■□□□□ 0.88
SHKBP1-202ENST00000593764 NFKBIZQ9BYH8 718 aa20.53■□□□□ 0.88
SHKBP1-202ENST00000593764 LMAN2LQ9H0V9 348 aa20.53■□□□□ 0.88
SHKBP1-202ENST00000593764 DDX19AQ9NUU7 478 aaKnown RBP20.53■□□□□ 0.88
SHKBP1-202ENST00000593764 STK24Q9Y6E0 443 aa20.53■□□□□ 0.88
SHKBP1-202ENST00000593764 TTC28Q96AY4 2481 aa20.53■□□□□ 0.88
SHKBP1-202ENST00000593764 ARHGEF35A5YM69 484 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 MEIS3P2A8K0S8 358 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 K7ELQ4 463 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 MBTD1Q05BQ5 628 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 AMHR2Q16671 573 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 TIGD5Q53EQ6 642 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 TJAP1Q5JTD0 557 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 UBXN11Q5T124 520 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 ARL6IP4Q66PJ3 421 aaKnown RBP20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 BRAPQ7Z569 592 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 COLGALT1Q8NBJ5 622 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 HELQQ8TDG4 1101 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 LPPQ93052 612 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 HLA-CQ95604 372 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 BHMT2Q9H2M3 363 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 COG5Q9UP83 839 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 MUC3AQ02505 3323 aa20.52■□□□□ 0.88
SHKBP1-202ENST00000593764 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 TSPAN1O60635 241 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 SKIP12755 728 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 PDCP20941 246 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 SYT1P21579 422 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 PCBP1Q15365 356 aaKnown RBP eCLIP20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 LONRF3Q496Y0 759 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 TCEAL5Q5H9L2 206 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 SPOUT1Q5T280 376 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 KRT79Q5XKE5 535 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 MRPL10Q7Z7H8 261 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 ABI1Q8IZP0 508 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 BSNDQ8WZ55 320 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 SNX21Q969T3 373 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 NSUN3Q9H649 340 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 PCDHB2Q9Y5E7 798 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 PCDHB12Q9Y5F1 795 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 ATG2AQ2TAZ0 1938 aa20.51■□□□□ 0.87
SHKBP1-202ENST00000593764 VPS37CA5D8V6 355 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-202ENST00000593764 INO80B-WBP1J3KQ70 363 aa20.5■□□□□ 0.87
SHKBP1-202ENST00000593764 RAB27AP51159 221 aa20.5■□□□□ 0.87
SHKBP1-202ENST00000593764 KCNK18Q7Z418 384 aa20.5■□□□□ 0.87
SHKBP1-202ENST00000593764 LRRC43Q8N309 656 aa20.5■□□□□ 0.87
SHKBP1-202ENST00000593764 POF1BQ8WVV4 589 aa20.5■□□□□ 0.87
SHKBP1-202ENST00000593764 POLD4Q9HCU8 107 aa20.5■□□□□ 0.87
SHKBP1-202ENST00000593764 AAASQ9NRG9 546 aa20.5■□□□□ 0.87
SHKBP1-202ENST00000593764 VWA3AA6NCI4 1184 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 E9PMD0 336 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 OFD1O75665 1012 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 ERLIN2O94905 339 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 EYA4O95677 639 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 LAG3P18627 525 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 AXLP30530 894 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 COL19A1Q14993 1142 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 HYIQ5T013 277 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 CDCA2Q69YH5 1023 aaPredicted RBP20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 AGMOQ6ZNB7 445 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 CPB2Q96IY4 423 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 FOXD4L1Q9NU39 408 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 DNM3Q9UQ16 869 aa20.49■□□□□ 0.87
SHKBP1-202ENST00000593764 LRRIQ4A6NIV6 560 aa20.48■□□□□ 0.87
SHKBP1-202ENST00000593764 B4GALT5O43286 388 aa20.48■□□□□ 0.87
SHKBP1-202ENST00000593764 FGF18O76093 207 aa20.48■□□□□ 0.87
SHKBP1-202ENST00000593764 BMP1P13497 986 aa20.48■□□□□ 0.87
SHKBP1-202ENST00000593764 ARF4P18085 180 aaPredicted RBP20.48■□□□□ 0.87
SHKBP1-202ENST00000593764 IRS1P35568 1242 aa20.48■□□□□ 0.87
SHKBP1-202ENST00000593764 KCNQ1P51787 676 aa20.48■□□□□ 0.87
SHKBP1-202ENST00000593764 KCNT2Q6UVM3 1135 aa20.48■□□□□ 0.87
SHKBP1-202ENST00000593764 SMG8Q8ND04 991 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-202ENST00000593764 PNMA5Q96PV4 448 aa20.48■□□□□ 0.87
SHKBP1-202ENST00000593764 EIF2AQ9BY44 585 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-202ENST00000593764 UBE2ZQ9H832 354 aaPredicted RBP20.48■□□□□ 0.87
SHKBP1-202ENST00000593764 PLXNA4Q9HCM2 1894 aa20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 CSPG5O95196 566 aa20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 PBX3P40426 434 aa20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 AFF1P51825 1210 aaKnown RBP20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 UBE3AQ05086 875 aa20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 RESTQ13127 1097 aa20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 SF3A1Q15459 793 aaKnown RBP20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 CSPP1Q1MSJ5 1256 aa20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 AAK1Q2M2I8 961 aa20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 NOTUMQ6P988 496 aa20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 THNSL1Q8IYQ7 743 aa20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 PGBD4Q96DM1 585 aa20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 CSRNP2Q9H175 543 aa20.47■□□□□ 0.87
SHKBP1-202ENST00000593764 FZD8Q9H461 694 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms