RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 SUCLA2Q9P2R7 463 aaPredicted RBP11.98□□□□□ -0.49
USE1-203ENST00000593597 DDX25Q9UHL0 483 aaKnown RBP11.98□□□□□ -0.49
USE1-203ENST00000593597 PIN4Q9Y237 131 aaKnown RBP11.98□□□□□ -0.49
USE1-203ENST00000593597 MTCL1Q9Y4B5 1905 aaKnown RBP11.98□□□□□ -0.49
USE1-203ENST00000593597 DDX11L8A8MPP1 907 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 WNT7AO00755 349 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 ZBTB39O15060 712 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 ZC3H11AO75152 810 aaKnown RBP eCLIP11.97□□□□□ -0.49
USE1-203ENST00000593597 DDHD2O94830 711 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 REC8O95072 547 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 GALTP07902 379 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 EPCAMP16422 314 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 SLC11A1P49279 550 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 SPIRE1Q08AE8 756 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 PPP2R5CQ13362 524 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 NONOQ15233 471 aaKnown RBP eCLIP11.97□□□□□ -0.49
USE1-203ENST00000593597 LETM2Q2VYF4 491 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 ZNF410Q86VK4 478 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 TRIM22Q8IYM9 498 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 ZNF710Q8N1W2 664 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 FBXL6Q8N531 539 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 SLC22A17Q8WUG5 538 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 IGSF21Q96ID5 467 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 NLRP4Q96MN2 994 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 TM6SF1Q9BZW5 370 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 CYP26B1Q9NR63 512 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 CHST12Q9NRB3 414 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 BMP2KQ9NSY1 1161 aaPredicted RBP11.97□□□□□ -0.49
USE1-203ENST00000593597 AGPAT5Q9NUQ2 364 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 FAM105AQ9NUU6 356 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 DACT1Q9NYF0 836 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 PUF60Q9UHX1 559 aaKnown RBP11.97□□□□□ -0.49
USE1-203ENST00000593597 CYP46A1Q9Y6A2 500 aa11.97□□□□□ -0.49
USE1-203ENST00000593597 ZFHX2Q9C0A1 2572 aaPredicted RBP11.97□□□□□ -0.49
USE1-203ENST00000593597 DOCK6Q96HP0 2047 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 FSD2A1L4K1 749 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 ZNF623O75123 536 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 BRD1O95696 1058 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 HOXB8P17481 243 aaPredicted RBP11.96□□□□□ -0.49
USE1-203ENST00000593597 SFPQP23246 707 aaKnown RBP eCLIP11.96□□□□□ -0.49
USE1-203ENST00000593597 HOXA11P31270 313 aaPredicted RBP11.96□□□□□ -0.49
USE1-203ENST00000593597 PSMC5P62195 406 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 KRT17Q04695 432 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 TWF2Q6IBS0 349 aaKnown RBP11.96□□□□□ -0.49
USE1-203ENST00000593597 POTEDQ86YR6 584 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 VPS52Q8N1B4 723 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 CASP10Q92851 521 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 TNFRSF25Q93038 417 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 TMEM143Q96AN5 459 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 MRPL9Q9BYD2 267 aaKnown RBP11.96□□□□□ -0.49
USE1-203ENST00000593597 C22orf23Q9BZE7 217 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 ADAM7Q9H2U9 754 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 DHX33Q9H6R0 707 aaKnown RBP11.96□□□□□ -0.49
USE1-203ENST00000593597 XPNPEP1Q9NQW7 623 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 TPCN1Q9ULQ1 816 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 INPP5FQ9Y2H2 1132 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 COL4A3BPQ9Y5P4 624 aa11.96□□□□□ -0.49
USE1-203ENST00000593597 STK36Q9NRP7 1315 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.95□□□□□ -0.5
USE1-203ENST00000593597 EPB41L2O43491 1005 aaKnown RBP11.95□□□□□ -0.5
USE1-203ENST00000593597 LILRB3O75022 631 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 LARGE1O95461 756 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 CXCL14O95715 111 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 CTSAP10619 480 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 QARSP47897 775 aaKnown RBP11.95□□□□□ -0.5
USE1-203ENST00000593597 PTPN14Q15678 1187 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 NOMO2Q5JPE7 1267 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 RARS2Q5T160 578 aaKnown RBP11.95□□□□□ -0.5
USE1-203ENST00000593597 PPP4R3AQ6IN85 833 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 CATSPER4Q7RTX7 472 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 KRT25Q7Z3Z0 450 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 MRPL10Q7Z7H8 261 aaKnown RBP11.95□□□□□ -0.5
USE1-203ENST00000593597 DDX53Q86TM3 631 aaKnown RBP11.95□□□□□ -0.5
USE1-203ENST00000593597 TMEM169Q96HH4 297 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 PDRG1Q9NUG6 133 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 FAM86C1Q9NVL1 165 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 MARCH5Q9NX47 278 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 RGL1Q9NZL6 768 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 PCDHB2Q9Y5E7 798 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 IRAK3Q9Y616 596 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 VWA8A3KMH1 1905 aa11.95□□□□□ -0.5
USE1-203ENST00000593597 F8W810 466 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 CPLX1O14810 134 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 EFEMP2O95967 443 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 ASGR2P07307 311 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 SRGAP2BP0DMP2 458 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 FDPSP14324 419 aaKnown RBP11.94□□□□□ -0.5
USE1-203ENST00000593597 ALDH7A1P49419 539 aaKnown RBP11.94□□□□□ -0.5
USE1-203ENST00000593597 NR5A1Q13285 461 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 GALNT17Q6IS24 598 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 KIAA1841Q6NSI8 718 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 PIK3AP1Q6ZUJ8 805 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 NEK8Q86SG6 692 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 FAM177A1Q8N128 213 aaPredicted RBP11.94□□□□□ -0.5
USE1-203ENST00000593597 KREMEN2Q8NCW0 462 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 SMG8Q8ND04 991 aaKnown RBP11.94□□□□□ -0.5
USE1-203ENST00000593597 PRPF31Q8WWY3 499 aaKnown RBP11.94□□□□□ -0.5
USE1-203ENST00000593597 DYDC2Q96IM9 177 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 CEP170P1Q96L14 293 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms