RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 EPHB4P54760 987 aa6.6□□□□□ -1.35
SMAD4-216ENST00000593223 LGALS4P56470 323 aa6.6□□□□□ -1.35
SMAD4-216ENST00000593223 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMAD4-216ENST00000593223 SLFN13Q68D06 897 aa6.6□□□□□ -1.35
SMAD4-216ENST00000593223 LMBR1LQ6UX01 489 aa6.6□□□□□ -1.35
SMAD4-216ENST00000593223 GIMAP8Q8ND71 665 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-216ENST00000593223 OR14C36Q8NHC7 312 aa6.6□□□□□ -1.35
SMAD4-216ENST00000593223 LMBR1Q8WVP7 490 aa6.6□□□□□ -1.35
SMAD4-216ENST00000593223 NKD2Q969F2 451 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-216ENST00000593223 SLC7A6OSQ96CW6 309 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-216ENST00000593223 MTMR8Q96EF0 704 aa6.6□□□□□ -1.35
SMAD4-216ENST00000593223 NEIL1Q96FI4 390 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-216ENST00000593223 UIMC1Q96RL1 719 aa6.6□□□□□ -1.35
SMAD4-216ENST00000593223 PTPN18Q99952 460 aa6.6□□□□□ -1.35
SMAD4-216ENST00000593223 QRSL1Q9H0R6 528 aaKnown RBP6.6□□□□□ -1.35
SMAD4-216ENST00000593223 SEC61A2Q9H9S3 476 aa6.6□□□□□ -1.35
SMAD4-216ENST00000593223 PRSS50Q9UI38 385 aa6.6□□□□□ -1.35
SMAD4-216ENST00000593223 URB2Q14146 1524 aaKnown RBP6.6□□□□□ -1.35
SMAD4-216ENST00000593223 CDC14BO60729 498 aa6.59□□□□□ -1.35
SMAD4-216ENST00000593223 KATNA1O75449 491 aa6.59□□□□□ -1.35
SMAD4-216ENST00000593223 GPR15P49685 360 aa6.59□□□□□ -1.35
SMAD4-216ENST00000593223 IGBP1P78318 339 aa6.59□□□□□ -1.35
SMAD4-216ENST00000593223 ATP2C1P98194 919 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-216ENST00000593223 PLP2Q04941 152 aa6.59□□□□□ -1.35
SMAD4-216ENST00000593223 SPIDRQ14159 915 aa6.59□□□□□ -1.35
SMAD4-216ENST00000593223 TRIM25Q14258 630 aaKnown RBP6.59□□□□□ -1.35
SMAD4-216ENST00000593223 PLA2G15Q8NCC3 412 aa6.59□□□□□ -1.35
SMAD4-216ENST00000593223 RELTQ969Z4 430 aa6.59□□□□□ -1.35
SMAD4-216ENST00000593223 RAX2Q96IS3 184 aa6.59□□□□□ -1.35
SMAD4-216ENST00000593223 OSBPL6Q9BZF3 934 aa6.59□□□□□ -1.35
SMAD4-216ENST00000593223 HAPLN2Q9GZV7 340 aa6.59□□□□□ -1.35
SMAD4-216ENST00000593223 TMPRSS11EQ9UL52 423 aa6.59□□□□□ -1.35
SMAD4-216ENST00000593223 CTDP1Q9Y5B0 961 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-216ENST00000593223 A0A0A6YYK5 440 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-216ENST00000593223 C2orf78A6NCI8 922 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 CELA3BP08861 270 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 CR2P20023 1033 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 BPIFB4P59827 614 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 CDK17Q00537 523 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 MGAT5Q09328 741 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 KLF1Q13351 362 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-216ENST00000593223 TCIRG1Q13488 830 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 NFYCQ13952 458 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 CCDC178Q5BJE1 867 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 TOR2AQ5JU69 321 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 KRT40Q6A162 431 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 GAREM2Q75VX8 874 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 LIMS2Q7Z4I7 341 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 CIR1Q86X95 450 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-216ENST00000593223 GLB1L2Q8IW92 636 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 AMOTL1Q8IY63 956 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 RPL10LQ96L21 214 aaKnown RBP6.58□□□□□ -1.36
SMAD4-216ENST00000593223 GNRHR2Q96P88 292 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 DPYSL5Q9BPU6 564 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 SOX7Q9BT81 388 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 KRTAP17-1Q9BYP8 105 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 PRDM12Q9H4Q4 367 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 HOMER2Q9NSB8 354 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.58□□□□□ -1.36
SMAD4-216ENST00000593223 DNAJC28Q9NX36 388 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 PPP4R1LQ9P1A2 415 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 DPP7Q9UHL4 492 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 OAZ3Q9UMX2 235 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 FANCD2Q9BXW9 1451 aa6.58□□□□□ -1.36
SMAD4-216ENST00000593223 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 MTHFD2P13995 350 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 ERVK-21P61565 698 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 CCT2P78371 535 aaKnown RBP6.57□□□□□ -1.36
SMAD4-216ENST00000593223 CD69Q07108 199 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 MTMR1Q13613 665 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 ACAP1Q15027 740 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 CLUL1Q15846 466 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 LILRA6Q6PI73 481 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 CLEC14AQ86T13 490 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 TAX1BP1Q86VP1 789 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 ANKRD53Q8N9V6 530 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 CXorf38Q8TB03 319 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 AUTS2Q8WXX7 1259 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 MENTQ9BUN1 341 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 TRIM8Q9BZR9 551 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 SLC6A15Q9H2J7 730 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 C14orf93Q9H972 538 aaKnown RBP6.57□□□□□ -1.36
SMAD4-216ENST00000593223 EVLQ9UI08 416 aaPredicted RBP6.57□□□□□ -1.36
SMAD4-216ENST00000593223 TRHDEQ9UKU6 1024 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 CDY2AQ9Y6F7 541 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 GAPVD1Q14C86 1478 aa6.57□□□□□ -1.36
SMAD4-216ENST00000593223 SLC26A4O43511 780 aa6.56□□□□□ -1.36
SMAD4-216ENST00000593223 SYN1P17600 705 aa6.56□□□□□ -1.36
SMAD4-216ENST00000593223 GPR3P46089 330 aa6.56□□□□□ -1.36
SMAD4-216ENST00000593223 MRPS9P82933 396 aaKnown RBP6.56□□□□□ -1.36
SMAD4-216ENST00000593223 SRSF2Q01130 221 aaKnown RBP6.56□□□□□ -1.36
SMAD4-216ENST00000593223 SYDE2Q5VT97 1194 aa6.56□□□□□ -1.36
SMAD4-216ENST00000593223 PGM2L1Q6PCE3 622 aa6.56□□□□□ -1.36
SMAD4-216ENST00000593223 LYSMD2Q8IV50 215 aa6.56□□□□□ -1.36
SMAD4-216ENST00000593223 FDXACB1Q9BRP7 624 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-216ENST00000593223 CCDC8Q9H0W5 538 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-216ENST00000593223 MEGF9Q9H1U4 602 aa6.56□□□□□ -1.36
SMAD4-216ENST00000593223 CCM2LQ9NUG4 571 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-216ENST00000593223 NCDNQ9UBB6 729 aa6.56□□□□□ -1.36
SMAD4-216ENST00000593223 KDM6BO15054 1643 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms