RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 KIZQ2M2Z5 673 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 PLEKHG4Q58EX7 1191 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 FAM26DQ5JW98 314 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 PPP2R2DQ66LE6 453 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 TMEM40Q8WWA1 233 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 PRPF31Q8WWY3 499 aaKnown RBP10.67□□□□□ -0.7
DDX39A-220ENST00000593008 SLC7A3Q8WY07 619 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 SEPT8Q92599 483 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 NLRP4Q96MN2 994 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 FIZ1Q96SL8 496 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 SLC9A7Q96T83 725 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 C7orf25Q9BPX7 421 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 ZBED2Q9BTP6 218 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 IFIH1Q9BYX4 1025 aaKnown RBP10.67□□□□□ -0.7
DDX39A-220ENST00000593008 CERS4Q9HA82 394 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 SLC28A3Q9HAS3 691 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 AKT3Q9Y243 479 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 GINS2Q9Y248 185 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 GDAQ9Y2T3 454 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 PCDHA11Q9Y5I1 949 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 EVPLQ92817 2033 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 LOXHD1Q8IVV2 1947 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 EYSQ5T1H1 3165 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 FRMD3A2A2Y4 597 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 LCHNA4D1U4 455 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 TTLL13PA6NNM8 815 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 SLC16A4O15374 487 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 TLL1O43897 1013 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 TBCAO75347 108 aaKnown RBP10.66□□□□□ -0.7
DDX39A-220ENST00000593008 FAM13AO94988 1023 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 ARHGEF15O94989 841 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 RPN1P04843 607 aaKnown RBP10.66□□□□□ -0.7
DDX39A-220ENST00000593008 MYBP10242 640 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 BMP6P22004 513 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 PEX3P56589 373 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 LAMTOR4Q0VGL1 99 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 LPIN1Q14693 890 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 KLHL40Q2TBA0 621 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 KMT5BQ4FZB7 885 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 ZC2HC1CQ53FD0 456 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-220ENST00000593008 IER5Q5VY09 327 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 RPAINQ86UA6 219 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 RHPN2Q8IUC4 686 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 MYOCDQ8IZQ8 938 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 KIAA0895Q8NCT3 520 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 PHOSPHO2Q8TCD6 241 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 TIGD1Q96MW7 591 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 OSMRQ99650 979 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 GZF1Q9H116 711 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-220ENST00000593008 CUEDC2Q9H467 287 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 PRDM12Q9H4Q4 367 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 MINDY3Q9H8M7 445 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 AGO3Q9H9G7 860 aaKnown RBP10.66□□□□□ -0.7
DDX39A-220ENST00000593008 PANK4Q9NVE7 773 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 MAN1B1Q9UKM7 699 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 STXBP5LQ9Y2K9 1186 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 PCDHA5Q9Y5H7 936 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 COL4A3BPQ9Y5P4 624 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 CHD7Q9P2D1 2997 aa10.66□□□□□ -0.7
DDX39A-220ENST00000593008 TMEM265A0A087WTH1 108 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 A0A087WZ62 844 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 SMIM35A0A1B0GVV1 85 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 TISP43B9A030 160 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 M0QZ92 97 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 UPP2O95045 317 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 AMHP03971 560 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 SRGAP2CP0DJJ0 459 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 FOSL2P15408 326 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 CD52P31358 61 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 NPTX2P47972 431 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 GPC3P51654 580 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 ZNF131P52739 623 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 EHHADHQ08426 723 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 KCNA1Q09470 495 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 FBXO47Q5MNV8 452 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 CCDC183Q5T5S1 534 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 TAS1R3Q7RTX0 852 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 SPRED2Q7Z698 418 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 MYCT1Q8N699 235 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 MCPH1Q8NEM0 835 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 FDXACB1Q9BRP7 624 aaPredicted RBP10.65□□□□□ -0.7
DDX39A-220ENST00000593008 ADAMTS10Q9H324 1103 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 MAGEF1Q9HAY2 307 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 SLC39A2Q9NP94 309 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 USP25Q9UHP3 1055 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 MAPK8IP1Q9UQF2 711 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 TRPV2Q9Y5S1 764 aa10.65□□□□□ -0.7
DDX39A-220ENST00000593008 ZMYM2Q9UBW7 1377 aa10.65□□□□□ -0.71
DDX39A-220ENST00000593008 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.64□□□□□ -0.71
DDX39A-220ENST00000593008 SYCE3A1L190 88 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 LRRIQ4A6NIV6 560 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 K7ENM7 598 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 MAGEB2O15479 319 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 B4GALT5O43286 388 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 EFCAB14O75071 495 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 GPR32O75388 356 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 GJB5O95377 273 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 PLS3P13797 630 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 CD44P16070 742 aaKnown RBP10.64□□□□□ -0.71
DDX39A-220ENST00000593008 IBSPP21815 317 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms