RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 MBTD1Q05BQ5 628 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 TFDP1Q14186 410 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 STK38Q15208 465 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 NAALADL2Q58DX5 795 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 PPP2R2DQ66LE6 453 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 CDCA2Q69YH5 1023 aaPredicted RBP16.97■□□□□ 0.31
TRIM47-206ENST00000592942 ATL3Q6DD88 541 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 CATSPER4Q7RTX7 472 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 ZNF598Q86UK7 904 aaKnown RBP16.97■□□□□ 0.31
TRIM47-206ENST00000592942 CALML4Q96GE6 196 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 CDX2Q99626 313 aaPredicted RBP16.97■□□□□ 0.31
TRIM47-206ENST00000592942 ELAC1Q9H777 363 aaKnown RBP16.97■□□□□ 0.31
TRIM47-206ENST00000592942 AGPAT5Q9NUQ2 364 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 STXBP5LQ9Y2K9 1186 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 MYO9BQ13459 2157 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 EPOPA6NHQ4 379 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 SFI1A8K8P3 1242 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 ATF7P17544 494 aaPredicted RBP16.96■□□□□ 0.31
TRIM47-206ENST00000592942 GUCY2CP25092 1073 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 PHKA2P46019 1235 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 UBXN11Q5T124 520 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 ECHDC2Q86YB7 292 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 RAD54LQ92698 747 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 KIFAP3Q92845 792 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 YME1L1Q96TA2 773 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 FZD8Q9H461 694 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 CERS4Q9HA82 394 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 PCDHB7Q9Y5E2 793 aa16.96■□□□□ 0.31
TRIM47-206ENST00000592942 ADGRA3Q8IWK6 1321 aa16.96■□□□□ 0.3
TRIM47-206ENST00000592942 NPHP3-ACAD11A0A0J9YXS1 232 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 TTLL13PA6NNM8 815 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 RFXAPO00287 272 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 TSPAN1O60635 241 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 HIP1RO75146 1068 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 STAG3L1P0CL83 205 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 NAMPTP43490 491 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 ERVK-21P61565 698 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 MCM6Q14566 821 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 SHC4Q6S5L8 630 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 CCDC113Q9H0I3 377 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 TMEM161AQ9NX61 479 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 PCDHA7Q9UN72 937 aa16.95■□□□□ 0.3
TRIM47-206ENST00000592942 LRRIQ4A6NIV6 560 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 INO80B-WBP1J3KQ70 363 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 ZNF623O75123 536 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 EDN1P05305 212 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 SSBP05455 408 aaKnown RBP eCLIP16.94■□□□□ 0.3
TRIM47-206ENST00000592942 RAD51AP2Q09MP3 1159 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 ADGRE1Q14246 886 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 PCBP1Q15365 356 aaKnown RBP eCLIP16.94■□□□□ 0.3
TRIM47-206ENST00000592942 FAM187BQ17R55 369 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 MYLIPQ8WY64 445 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 NTPCRQ9BSD7 190 aaKnown RBP16.94■□□□□ 0.3
TRIM47-206ENST00000592942 C17orf80Q9BSJ5 609 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 KIFC3Q9BVG8 833 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 PANK2Q9BZ23 570 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 PRDM12Q9H4Q4 367 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 DACT1Q9NYF0 836 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 CFAP45Q9UL16 551 aa16.94■□□□□ 0.3
TRIM47-206ENST00000592942 PIN4Q9Y237 131 aaKnown RBP16.94■□□□□ 0.3
TRIM47-206ENST00000592942 MEIS3P2A8K0S8 358 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 B4GALT5O43286 388 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 CUTAO60888 179 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 EOMESO95936 686 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 FGFR1P11362 822 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 ARF4P18085 180 aaPredicted RBP16.93■□□□□ 0.3
TRIM47-206ENST00000592942 NPTX2P47972 431 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 PEX3P56589 373 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 PPP4R3CPQ6ZMV5 832 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 MRPL10Q7Z7H8 261 aaKnown RBP16.93■□□□□ 0.3
TRIM47-206ENST00000592942 CLP1Q92989 425 aaKnown RBP16.93■□□□□ 0.3
TRIM47-206ENST00000592942 CPB2Q96IY4 423 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 CASD1Q96PB1 797 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 TGS1Q96RS0 853 aaKnown RBP16.93■□□□□ 0.3
TRIM47-206ENST00000592942 TIPINQ9BVW5 301 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 FAM105AQ9NUU6 356 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 KCND2Q9NZV8 630 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 LRFN2Q9ULH4 789 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 USP20Q9Y2K6 914 aa16.93■□□□□ 0.3
TRIM47-206ENST00000592942 A0A1B0GUA9 196 aa16.92■□□□□ 0.3
TRIM47-206ENST00000592942 LPXNO60711 386 aa16.92■□□□□ 0.3
TRIM47-206ENST00000592942 IBSPP21815 317 aaPredicted RBP16.92■□□□□ 0.3
TRIM47-206ENST00000592942 AXLP30530 894 aa16.92■□□□□ 0.3
TRIM47-206ENST00000592942 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
TRIM47-206ENST00000592942 GIT2Q14161 759 aa16.92■□□□□ 0.3
TRIM47-206ENST00000592942 DHX8Q14562 1220 aaKnown RBP16.92■□□□□ 0.3
TRIM47-206ENST00000592942 PPP2R5AQ15172 486 aa16.92■□□□□ 0.3
TRIM47-206ENST00000592942 CLLU1OSQ5K130 101 aa16.92■□□□□ 0.3
TRIM47-206ENST00000592942 RRAGBQ5VZM2 374 aa16.92■□□□□ 0.3
TRIM47-206ENST00000592942 TWF2Q6IBS0 349 aaKnown RBP16.92■□□□□ 0.3
TRIM47-206ENST00000592942 LRRC55Q6ZSA7 311 aa16.92■□□□□ 0.3
TRIM47-206ENST00000592942 TAS1R3Q7RTX0 852 aa16.92■□□□□ 0.3
TRIM47-206ENST00000592942 GPBP1Q86WP2 473 aa16.92■□□□□ 0.3
TRIM47-206ENST00000592942 CMTR2Q8IYT2 770 aaKnown RBP16.92■□□□□ 0.3
TRIM47-206ENST00000592942 SMG8Q8ND04 991 aaKnown RBP16.92■□□□□ 0.3
TRIM47-206ENST00000592942 KCNG4Q8TDN1 519 aa16.92■□□□□ 0.3
TRIM47-206ENST00000592942 ARNTL2Q8WYA1 636 aa16.92■□□□□ 0.3
TRIM47-206ENST00000592942 LARP4BQ92615 738 aaKnown RBP16.92■□□□□ 0.3
TRIM47-206ENST00000592942 IFT74Q96LB3 600 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms