RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 GUCY2CP25092 1073 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 SARSP49591 514 aaKnown RBP13.14□□□□□ -0.31
H3F3B-212ENST00000592643 BECN1Q14457 450 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 MCM6Q14566 821 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 STK38Q15208 465 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 SLC24A5Q71RS6 500 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 TAS1R3Q7RTX0 852 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 RAD54LQ92698 747 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 ZNF396Q96N95 335 aaPredicted RBP13.14□□□□□ -0.31
H3F3B-212ENST00000592643 SCLT1Q96NL6 688 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 TRAIPQ9BWF2 469 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 FZD8Q9H461 694 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 HCSTQ9UBK5 93 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 PCDHA7Q9UN72 937 aa13.14□□□□□ -0.31
H3F3B-212ENST00000592643 XIRP2A4UGR9 3374 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 TMEM265A0A087WTH1 108 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 SFI1A8K8P3 1242 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 RFXAPO00287 272 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 FGFR1P11362 822 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 RAD51AP2Q09MP3 1159 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 ADGRE1Q14246 886 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 E2F4Q16254 413 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 ECHDC2Q86YB7 292 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 NPAS4Q8IUM7 802 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 KCTD17Q8N5Z5 321 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 FIZ1Q96SL8 496 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 CDX2Q99626 313 aaPredicted RBP13.13□□□□□ -0.31
H3F3B-212ENST00000592643 PANK2Q9BZ23 570 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 NT5C3AQ9H0P0 336 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 CERS4Q9HA82 394 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 MSRAQ9UJ68 235 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 MYH15Q9Y2K3 1946 aa13.13□□□□□ -0.31
H3F3B-212ENST00000592643 A0A0U1RQF3 1178 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 DENND3A2RUS2 1198 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 LPXNO60711 386 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 ARF4P18085 180 aaPredicted RBP13.12□□□□□ -0.31
H3F3B-212ENST00000592643 SFPQP23246 707 aaKnown RBP eCLIP13.12□□□□□ -0.31
H3F3B-212ENST00000592643 PHKA2P46019 1235 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 NPTX2P47972 431 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 AFF1P51825 1210 aaKnown RBP13.12□□□□□ -0.31
H3F3B-212ENST00000592643 GIT2Q14161 759 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 CLLU1OSQ5K130 101 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 ZNF697Q5TEC3 545 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 CATSPER4Q7RTX7 472 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 CDR2LQ86X02 465 aaPredicted RBP13.12□□□□□ -0.31
H3F3B-212ENST00000592643 LEO1Q8WVC0 666 aaPredicted RBP13.12□□□□□ -0.31
H3F3B-212ENST00000592643 CPB2Q96IY4 423 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 CCDC43Q96MW1 224 aaKnown RBP13.12□□□□□ -0.31
H3F3B-212ENST00000592643 REEP2Q9BRK0 252 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 C17orf80Q9BSJ5 609 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 ZBED2Q9BTP6 218 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 EIF2AQ9BY44 585 aaKnown RBP13.12□□□□□ -0.31
H3F3B-212ENST00000592643 CHST12Q9NRB3 414 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 PIN4Q9Y237 131 aaKnown RBP13.12□□□□□ -0.31
H3F3B-212ENST00000592643 INSL6Q9Y581 213 aa13.12□□□□□ -0.31
H3F3B-212ENST00000592643 MYMKA6NI61 221 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 LRRIQ4A6NIV6 560 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 INO80B-WBP1J3KQ70 363 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 CUTAO60888 179 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 SSBP05455 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
H3F3B-212ENST00000592643 NAMPTP43490 491 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 ZNF131P52739 623 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 ERVK-21P61565 698 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 TFDP1Q14186 410 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 DHX8Q14562 1220 aaKnown RBP13.11□□□□□ -0.31
H3F3B-212ENST00000592643 FAM187BQ17R55 369 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 LRRC55Q6ZSA7 311 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 GPBP1Q86WP2 473 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 SMG8Q8ND04 991 aaKnown RBP13.11□□□□□ -0.31
H3F3B-212ENST00000592643 KCNG4Q8TDN1 519 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 LPPQ93052 612 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 CALML4Q96GE6 196 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 CASD1Q96PB1 797 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 NTPCRQ9BSD7 190 aaKnown RBP13.11□□□□□ -0.31
H3F3B-212ENST00000592643 INO80BQ9C086 356 aaPredicted RBP13.11□□□□□ -0.31
H3F3B-212ENST00000592643 PRDM12Q9H4Q4 367 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 ELAC1Q9H777 363 aaKnown RBP13.11□□□□□ -0.31
H3F3B-212ENST00000592643 SLC28A3Q9HAS3 691 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 C1orf112Q9NSG2 853 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 TMEM161AQ9NX61 479 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 ARHGAP28Q9P2N2 729 aa13.11□□□□□ -0.31
H3F3B-212ENST00000592643 A0A1B0GUA9 196 aa13.1□□□□□ -0.31
H3F3B-212ENST00000592643 B4GALT3O60512 393 aa13.1□□□□□ -0.31
H3F3B-212ENST00000592643 ZNF623O75123 536 aa13.1□□□□□ -0.31
H3F3B-212ENST00000592643 IBSPP21815 317 aaPredicted RBP13.1□□□□□ -0.31
H3F3B-212ENST00000592643 PEX3P56589 373 aa13.1□□□□□ -0.31
H3F3B-212ENST00000592643 LONRF3Q496Y0 759 aa13.1□□□□□ -0.31
H3F3B-212ENST00000592643 ODR4Q5SWX8 454 aa13.1□□□□□ -0.31
H3F3B-212ENST00000592643 NT5DC1Q5TFE4 455 aa13.1□□□□□ -0.31
H3F3B-212ENST00000592643 RESP18Q5W5W9 173 aa13.1□□□□□ -0.31
H3F3B-212ENST00000592643 AGMOQ6ZNB7 445 aa13.1□□□□□ -0.31
H3F3B-212ENST00000592643 FAM43BQ6ZT52 329 aaPredicted RBP13.1□□□□□ -0.31
H3F3B-212ENST00000592643 MRPL10Q7Z7H8 261 aaKnown RBP13.1□□□□□ -0.31
H3F3B-212ENST00000592643 MYLIPQ8WY64 445 aa13.1□□□□□ -0.31
H3F3B-212ENST00000592643 LARP4BQ92615 738 aaKnown RBP13.1□□□□□ -0.31
H3F3B-212ENST00000592643 CLP1Q92989 425 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms