RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 C6orf118Q5T5N4 469 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 SLFN13Q68D06 897 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 TAS2R14Q9NYV8 317 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 ALG6Q9Y672 507 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 SFI1A8K8P3 1242 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 MIF4GDA9UHW6 222 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 EML1O00423 815 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 PODXLO00592 558 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 AGTP01019 485 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 NMT1P30419 496 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 SLC29A2Q14542 456 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 NBPF9Q3BBW0 867 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 CBWD6Q4V339 395 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 TNFAIP8L3Q5GJ75 292 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 CBWD3Q5JTY5 395 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 CBWD5Q5RIA9 395 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 BTNL9Q6UXG8 535 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 C1orf186Q6ZWK4 172 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 ADAT2Q7Z6V5 191 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 ANKS4BQ8N8V4 417 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 HSD17B14Q9BPX1 270 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 INTS2Q9H0H0 1204 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 UBE4BO95155 1302 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 RPTORQ8N122 1335 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 SYNGAP1Q96PV0 1343 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 FAM13AO94988 1023 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 ADCY2Q08462 1091 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 C11orf63Q6NUN7 778 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 CERS5Q8N5B7 392 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 MYCT1Q8N699 235 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 FIZ1Q96SL8 496 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 IKZF4Q9H2S9 585 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 GOPCQ9HD26 462 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 TRPC6Q9Y210 931 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 PCDHA3Q9Y5H8 950 aa16.05■□□□□ 0.16
SMARCA4-219ENST00000592604 LTBP1Q14766 1721 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 C6orf229H3BNL8 230 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 RGS16O15492 202 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 CYP3A4P08684 503 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 EEF2P13639 858 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 CTNNA2P26232 953 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 CDC42EP5Q6NZY7 148 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 PALB2Q86YC2 1186 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 RGL1Q9NZL6 768 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 PARP2Q9UGN5 583 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 RFX1P22670 979 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 CTTNQ14247 550 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 ZC2HC1CQ53FD0 456 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 PRELID2Q8N945 189 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 AGPAT1Q99943 283 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 AZI2Q9H6S1 392 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 TUFT1Q9NNX1 390 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 PFASO15067 1338 aa16.04■□□□□ 0.16
SMARCA4-219ENST00000592604 GGPS1O95749 300 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 ALAS1P13196 640 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 HOXA10P31260 410 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 SLC8A1P32418 973 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 IFI35P80217 286 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 ZNF720Q7Z2F6 126 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 GIMAP7Q8NHV1 300 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 SELENOSQ9BQE4 189 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 COA1Q9GZY4 146 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 SEMA4AQ9H3S1 761 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 DNAJC18Q9H819 358 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 PARVGQ9HBI0 331 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.03■□□□□ 0.161e-7■□□□□ 11.2
SMARCA4-219ENST00000592604 TMOD4Q9NZQ9 345 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 SEL1LQ9UBV2 794 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 SLC12A4Q9UP95 1085 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 ATP2C2O75185 946 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 RPL21P46778 160 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 ELF3P78545 371 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 COG2Q14746 738 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 FBXO11Q86XK2 927 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 UBL4BQ8N7F7 174 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 LMO3Q8TAP4 145 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 RPS6KC1Q96S38 1066 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 MTRF1LQ9UGC7 380 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 FRMD4BQ9Y2L6 1034 aa16.03■□□□□ 0.16
SMARCA4-219ENST00000592604 TLDC2A0PJX2 215 aa16.02■□□□□ 0.16
SMARCA4-219ENST00000592604 FOXN3O00409 490 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-219ENST00000592604 KRT13P13646 458 aa16.02■□□□□ 0.16
SMARCA4-219ENST00000592604 ZNF131P52739 623 aa16.02■□□□□ 0.16
SMARCA4-219ENST00000592604 PHLDB3Q6NSJ2 640 aa16.02■□□□□ 0.16
SMARCA4-219ENST00000592604 CHADLQ6NUI6 762 aa16.02■□□□□ 0.16
SMARCA4-219ENST00000592604 HS2ST1Q7LGA3 356 aa16.02■□□□□ 0.16
SMARCA4-219ENST00000592604 LRRC34Q8IZ02 419 aa16.02■□□□□ 0.16
SMARCA4-219ENST00000592604 CYP2W1Q8TAV3 490 aa16.02■□□□□ 0.16
SMARCA4-219ENST00000592604 AGPAT3Q9NRZ7 376 aa16.02■□□□□ 0.16
SMARCA4-219ENST00000592604 INTS9Q9NV88 658 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-219ENST00000592604 UBAP1LF5GYI3 381 aa16.02■□□□□ 0.15
SMARCA4-219ENST00000592604 SLITRK3O94933 977 aa16.02■□□□□ 0.15
SMARCA4-219ENST00000592604 SLURP2P0DP57 97 aa16.02■□□□□ 0.15
SMARCA4-219ENST00000592604 PEX5P50542 639 aa16.02■□□□□ 0.15
SMARCA4-219ENST00000592604 MYL7Q01449 175 aa16.02■□□□□ 0.15
SMARCA4-219ENST00000592604 AADACL2Q6P093 401 aa16.02■□□□□ 0.15
SMARCA4-219ENST00000592604 HHIPL2Q6UWX4 724 aa16.02■□□□□ 0.15
SMARCA4-219ENST00000592604 SIAH1Q8IUQ4 282 aa16.02■□□□□ 0.15
SMARCA4-219ENST00000592604 ZDHHC14Q8IZN3 488 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms