RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 FAM186BQ8IYM0 893 aa19.4■□□□□ 0.7
SPC24-206ENST00000592540 ETNPPLQ8TBG4 499 aa19.4■□□□□ 0.7
SPC24-206ENST00000592540 TRIM6Q9C030 488 aaPredicted RBP19.4■□□□□ 0.7
SPC24-206ENST00000592540 ECT2Q9H8V3 914 aa19.4■□□□□ 0.7
SPC24-206ENST00000592540 SEPT11Q9NVA2 429 aaKnown RBP19.4■□□□□ 0.7
SPC24-206ENST00000592540 GGT7Q9UJ14 662 aa19.4■□□□□ 0.7
SPC24-206ENST00000592540 USP15Q9Y4E8 981 aaPredicted RBP19.4■□□□□ 0.7
SPC24-206ENST00000592540 RARGP13631 454 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 CTNNA2P26232 953 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 PSMC2P35998 433 aaKnown RBP19.39■□□□□ 0.69
SPC24-206ENST00000592540 FMO5P49326 533 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 GABPAQ06546 454 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 GALNTL6Q49A17 601 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 MFSD5Q6N075 450 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 TTC27Q6P3X3 843 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 KCTD1Q719H9 257 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 NARFQ9UHQ1 456 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 COL16A1Q07092 1604 aaPredicted RBP19.39■□□□□ 0.69
SPC24-206ENST00000592540 FRMPD4Q14CM0 1322 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 SPATA31A1Q5TZJ5 1347 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 ALDH5A1P51649 535 aaPredicted RBP19.39■□□□□ 0.69
SPC24-206ENST00000592540 GPATCH4Q5T3I0 446 aaKnown RBP19.39■□□□□ 0.69
SPC24-206ENST00000592540 EXOC3L1Q86VI1 746 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 ZDHHC14Q8IZN3 488 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 KRT35Q92764 455 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 RUSC1Q9BVN2 902 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 IKZF4Q9H2S9 585 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 CD209Q9NNX6 404 aa19.39■□□□□ 0.69
SPC24-206ENST00000592540 MIF4GDA9UHW6 222 aaKnown RBP19.38■□□□□ 0.69
SPC24-206ENST00000592540 TBCAO75347 108 aaKnown RBP19.38■□□□□ 0.69
SPC24-206ENST00000592540 ZNF131P52739 623 aa19.38■□□□□ 0.69
SPC24-206ENST00000592540 PRR16Q569H4 304 aa19.38■□□□□ 0.69
SPC24-206ENST00000592540 CCDC137Q6PK04 289 aaKnown RBP19.38■□□□□ 0.69
SPC24-206ENST00000592540 UBL4BQ8N7F7 174 aa19.38■□□□□ 0.69
SPC24-206ENST00000592540 DYDC1Q8WWB3 177 aa19.38■□□□□ 0.69
SPC24-206ENST00000592540 FAM163AQ96GL9 167 aaPredicted RBP19.38■□□□□ 0.69
SPC24-206ENST00000592540 GLT8D2Q9H1C3 349 aa19.38■□□□□ 0.69
SPC24-206ENST00000592540 BATF3Q9NR55 127 aa19.38■□□□□ 0.69
SPC24-206ENST00000592540 HOMER3Q9NSC5 361 aa19.38■□□□□ 0.69
SPC24-206ENST00000592540 NOP53Q9NZM5 478 aaKnown RBP19.38■□□□□ 0.69
SPC24-206ENST00000592540 IGF2BP3O00425 579 aaKnown RBP eCLIP19.37■□□□□ 0.69
SPC24-206ENST00000592540 ALAS1P13196 640 aa19.37■□□□□ 0.69
SPC24-206ENST00000592540 MARCKSL1P49006 195 aa19.37■□□□□ 0.69
SPC24-206ENST00000592540 HADHBP55084 474 aaKnown RBP19.37■□□□□ 0.69
SPC24-206ENST00000592540 MOXD1Q6UVY6 613 aa19.37■□□□□ 0.69
SPC24-206ENST00000592540 RHOT2Q8IXI1 618 aa19.37■□□□□ 0.69
SPC24-206ENST00000592540 BHMT2Q9H2M3 363 aa19.37■□□□□ 0.69
SPC24-206ENST00000592540 ZMYM2Q9UBW7 1377 aa19.37■□□□□ 0.69
SPC24-206ENST00000592540 ZNF831Q5JPB2 1677 aa19.37■□□□□ 0.69
SPC24-206ENST00000592540 LRRC14Q15048 493 aa19.37■□□□□ 0.69
SPC24-206ENST00000592540 C11orf63Q6NUN7 778 aa19.37■□□□□ 0.69
SPC24-206ENST00000592540 C15orf52Q6ZUT6 534 aaKnown RBP19.37■□□□□ 0.69
SPC24-206ENST00000592540 ART4Q93070 314 aa19.37■□□□□ 0.69
SPC24-206ENST00000592540 FGFR1OP2Q9NVK5 253 aa19.37■□□□□ 0.69
SPC24-206ENST00000592540 GAKO14976 1311 aa19.37■□□□□ 0.69
SPC24-206ENST00000592540 SFI1A8K8P3 1242 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 TCP11X1B4DZS4 312 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 BNIP1Q12981 228 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 PICALMQ13492 652 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 GRAPQ13588 217 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 CBWD6Q4V339 395 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 CBWD3Q5JTY5 395 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 CBWD5Q5RIA9 395 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 GRAPLQ8TC17 118 aaPredicted RBP19.36■□□□□ 0.69
SPC24-206ENST00000592540 RUNDC3BQ96NL0 473 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 ZSWIM1Q9BR11 485 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 ROPN1BQ9BZX4 212 aaPredicted RBP19.36■□□□□ 0.69
SPC24-206ENST00000592540 INTS2Q9H0H0 1204 aaKnown RBP19.36■□□□□ 0.69
SPC24-206ENST00000592540 ROPN1Q9HAT0 212 aaPredicted RBP19.36■□□□□ 0.69
SPC24-206ENST00000592540 OLFML3Q9NRN5 406 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 APEX2Q9UBZ4 518 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 ANKRD63C9JTQ0 380 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 SUN1O94901 812 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 GGPS1O95749 300 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 CCND1P24385 295 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 COPS2P61201 443 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 ARHGAP4P98171 946 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 CYP4A11Q02928 519 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 ARHGAP44Q17R89 818 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 SLF2Q8IX21 1173 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 GBP7Q8N8V2 638 aaPredicted RBP19.36■□□□□ 0.69
SPC24-206ENST00000592540 TBC1D16Q8TBP0 767 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 MGARPQ8TDB4 240 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 TBC1D22AQ8WUA7 517 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 TAOK3Q9H2K8 898 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 CTTNBP2NLQ9P2B4 639 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 PCDHA1Q9Y5I3 950 aa19.36■□□□□ 0.69
SPC24-206ENST00000592540 TBX3O15119 743 aa19.35■□□□□ 0.69
SPC24-206ENST00000592540 POLD1P28340 1107 aa19.35■□□□□ 0.69
SPC24-206ENST00000592540 CTTNQ14247 550 aaKnown RBP19.35■□□□□ 0.69
SPC24-206ENST00000592540 KIF22Q14807 665 aa19.35■□□□□ 0.69
SPC24-206ENST00000592540 QRICH1Q2TAL8 776 aa19.35■□□□□ 0.69
SPC24-206ENST00000592540 MFSD14BQ5SR56 506 aa19.35■□□□□ 0.69
SPC24-206ENST00000592540 BZW1Q7L1Q6 419 aaKnown RBP19.35■□□□□ 0.69
SPC24-206ENST00000592540 CRYGNQ8WXF5 182 aa19.35■□□□□ 0.69
SPC24-206ENST00000592540 KLHL29Q96CT2 875 aa19.35■□□□□ 0.69
SPC24-206ENST00000592540 AGPAT1Q99943 283 aa19.35■□□□□ 0.69
SPC24-206ENST00000592540 CNTNAP4Q9C0A0 1308 aa19.35■□□□□ 0.69
SPC24-206ENST00000592540 TMEM110-MUSTN1A8MSY1 372 aa19.35■□□□□ 0.69
SPC24-206ENST00000592540 EIF3DO15371 548 aaKnown RBP eCLIP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms