RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 PADI6Q6TGC4 694 aa30.24■■■□□ 2.43
SMAD4-213ENST00000591914 BRAPQ7Z569 592 aa30.24■■■□□ 2.43
SMAD4-213ENST00000591914 ABI1Q8IZP0 508 aa30.24■■■□□ 2.43
SMAD4-213ENST00000591914 KLHL23Q8NBE8 558 aa30.24■■■□□ 2.43
SMAD4-213ENST00000591914 ASB2Q96Q27 587 aa30.24■■■□□ 2.43
SMAD4-213ENST00000591914 ALG13Q9NP73 1137 aaKnown RBP30.24■■■□□ 2.43
SMAD4-213ENST00000591914 GPRC5CQ9NQ84 441 aa30.24■■■□□ 2.43
SMAD4-213ENST00000591914 FAM105AQ9NUU6 356 aa30.24■■■□□ 2.43
SMAD4-213ENST00000591914 KIAA1024Q9UPX6 916 aa30.24■■■□□ 2.43
SMAD4-213ENST00000591914 PP2D1A8MPX8 630 aa30.23■■■□□ 2.43
SMAD4-213ENST00000591914 K7ELQ4 463 aaPredicted RBP30.23■■■□□ 2.43
SMAD4-213ENST00000591914 ZNF623O75123 536 aa30.23■■■□□ 2.43
SMAD4-213ENST00000591914 TJAP1Q5JTD0 557 aa30.23■■■□□ 2.43
SMAD4-213ENST00000591914 LRRC55Q6ZSA7 311 aa30.23■■■□□ 2.43
SMAD4-213ENST00000591914 HLA-CQ95604 372 aa30.23■■■□□ 2.43
SMAD4-213ENST00000591914 AAASQ9NRG9 546 aa30.23■■■□□ 2.43
SMAD4-213ENST00000591914 DDX19AQ9NUU7 478 aaKnown RBP30.23■■■□□ 2.43
SMAD4-213ENST00000591914 DLL1O00548 723 aa30.22■■■□□ 2.43
SMAD4-213ENST00000591914 CYP11B2P19099 503 aa30.22■■■□□ 2.43
SMAD4-213ENST00000591914 MBTD1Q05BQ5 628 aa30.22■■■□□ 2.43
SMAD4-213ENST00000591914 CAMK1Q14012 370 aa30.22■■■□□ 2.43
SMAD4-213ENST00000591914 SPOUT1Q5T280 376 aaKnown RBP30.22■■■□□ 2.43
SMAD4-213ENST00000591914 KRT79Q5XKE5 535 aa30.22■■■□□ 2.43
SMAD4-213ENST00000591914 ARL6IP4Q66PJ3 421 aaKnown RBP30.22■■■□□ 2.43
SMAD4-213ENST00000591914 MAEAQ7L5Y9 396 aa30.22■■■□□ 2.43
SMAD4-213ENST00000591914 LRRC43Q8N309 656 aa30.22■■■□□ 2.43
SMAD4-213ENST00000591914 SPPL3Q8TCT6 385 aa30.22■■■□□ 2.43
SMAD4-213ENST00000591914 MMTAG2Q9BU76 263 aaKnown RBP30.22■■■□□ 2.43
SMAD4-213ENST00000591914 COL25A1Q9BXS0 654 aaPredicted RBP30.22■■■□□ 2.43
SMAD4-213ENST00000591914 NSUN3Q9H649 340 aaKnown RBP30.22■■■□□ 2.43
SMAD4-213ENST00000591914 PCDHB12Q9Y5F1 795 aa30.22■■■□□ 2.43
SMAD4-213ENST00000591914 TSPAN1O60635 241 aa30.21■■■□□ 2.43
SMAD4-213ENST00000591914 ERLIN2O94905 339 aa30.21■■■□□ 2.43
SMAD4-213ENST00000591914 CDC25AP30304 524 aa30.21■■■□□ 2.43
SMAD4-213ENST00000591914 TFF2Q03403 129 aa30.21■■■□□ 2.43
SMAD4-213ENST00000591914 COLGALT1Q8NBJ5 622 aa30.21■■■□□ 2.43
SMAD4-213ENST00000591914 HELQQ8TDG4 1101 aa30.21■■■□□ 2.43
SMAD4-213ENST00000591914 RSPH1Q8WYR4 309 aa30.21■■■□□ 2.43
SMAD4-213ENST00000591914 BHMT2Q9H2M3 363 aa30.21■■■□□ 2.43
SMAD4-213ENST00000591914 VPS37CA5D8V6 355 aaPredicted RBP30.2■■■□□ 2.43
SMAD4-213ENST00000591914 INO80B-WBP1J3KQ70 363 aa30.2■■■□□ 2.43
SMAD4-213ENST00000591914 LAG3P18627 525 aa30.2■■■□□ 2.43
SMAD4-213ENST00000591914 DNAJB1P25685 340 aa30.2■■■□□ 2.43
SMAD4-213ENST00000591914 AXLP30530 894 aa30.2■■■□□ 2.43
SMAD4-213ENST00000591914 AMHR2Q16671 573 aa30.2■■■□□ 2.43
SMAD4-213ENST00000591914 CSPP1Q1MSJ5 1256 aa30.2■■■□□ 2.43
SMAD4-213ENST00000591914 TCEAL5Q5H9L2 206 aa30.2■■■□□ 2.43
SMAD4-213ENST00000591914 UBXN11Q5T124 520 aa30.2■■■□□ 2.43
SMAD4-213ENST00000591914 PCDHB2Q9Y5E7 798 aa30.2■■■□□ 2.43
SMAD4-213ENST00000591914 PLXNA4Q9HCM2 1894 aa30.19■■■□□ 2.42
SMAD4-213ENST00000591914 CUL9Q8IWT3 2517 aa30.19■■■□□ 2.42
SMAD4-213ENST00000591914 AAK1Q2M2I8 961 aa30.19■■■□□ 2.42
SMAD4-213ENST00000591914 MRPL10Q7Z7H8 261 aaKnown RBP30.19■■■□□ 2.42
SMAD4-213ENST00000591914 LPPQ93052 612 aa30.19■■■□□ 2.42
SMAD4-213ENST00000591914 SNX21Q969T3 373 aa30.19■■■□□ 2.42
SMAD4-213ENST00000591914 BRWD1Q9NSI6 2320 aa30.19■■■□□ 2.42
SMAD4-213ENST00000591914 MYO7AQ13402 2215 aa30.19■■■□□ 2.42
SMAD4-213ENST00000591914 VWA3AA6NCI4 1184 aa30.18■■■□□ 2.42
SMAD4-213ENST00000591914 SYT1P21579 422 aa30.18■■■□□ 2.42
SMAD4-213ENST00000591914 CDCA2Q69YH5 1023 aaPredicted RBP30.18■■■□□ 2.42
SMAD4-213ENST00000591914 POF1BQ8WVV4 589 aa30.18■■■□□ 2.42
SMAD4-213ENST00000591914 SYMPKQ92797 1274 aaKnown RBP30.18■■■□□ 2.42
SMAD4-213ENST00000591914 CCDC51Q96ER9 411 aa30.18■■■□□ 2.42
SMAD4-213ENST00000591914 MRPL9Q9BYD2 267 aaKnown RBP30.18■■■□□ 2.42
SMAD4-213ENST00000591914 DNM3Q9UQ16 869 aa30.18■■■□□ 2.42
SMAD4-213ENST00000591914 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP30.17■■■□□ 2.42
SMAD4-213ENST00000591914 LRRIQ4A6NIV6 560 aa30.17■■■□□ 2.42
SMAD4-213ENST00000591914 MEIS3P2A8K0S8 358 aa30.17■■■□□ 2.42
SMAD4-213ENST00000591914 FGF18O76093 207 aa30.17■■■□□ 2.42
SMAD4-213ENST00000591914 EYA4O95677 639 aa30.17■■■□□ 2.42
SMAD4-213ENST00000591914 UBE3AQ05086 875 aa30.17■■■□□ 2.42
SMAD4-213ENST00000591914 COL19A1Q14993 1142 aa30.17■■■□□ 2.42
SMAD4-213ENST00000591914 LONRF3Q496Y0 759 aa30.17■■■□□ 2.42
SMAD4-213ENST00000591914 HYIQ5T013 277 aa30.17■■■□□ 2.42
SMAD4-213ENST00000591914 NOTUMQ6P988 496 aa30.17■■■□□ 2.42
SMAD4-213ENST00000591914 GLB1LQ6UWU2 654 aa30.17■■■□□ 2.42
SMAD4-213ENST00000591914 BSNDQ8WZ55 320 aa30.17■■■□□ 2.42
SMAD4-213ENST00000591914 PGBD4Q96DM1 585 aa30.17■■■□□ 2.42
SMAD4-213ENST00000591914 E9PMD0 336 aa30.16■■■□□ 2.42
SMAD4-213ENST00000591914 BMP15O95972 392 aa30.16■■■□□ 2.42
SMAD4-213ENST00000591914 NCBP1Q09161 790 aaKnown RBP30.16■■■□□ 2.42
SMAD4-213ENST00000591914 KCNT2Q6UVM3 1135 aa30.16■■■□□ 2.42
SMAD4-213ENST00000591914 THNSL1Q8IYQ7 743 aa30.16■■■□□ 2.42
SMAD4-213ENST00000591914 UBE2ZQ9H832 354 aaPredicted RBP30.16■■■□□ 2.42
SMAD4-213ENST00000591914 ARF4P18085 180 aaPredicted RBP30.15■■■□□ 2.42
SMAD4-213ENST00000591914 AGMOQ6ZNB7 445 aa30.15■■■□□ 2.42
SMAD4-213ENST00000591914 KCNK18Q7Z418 384 aa30.15■■■□□ 2.42
SMAD4-213ENST00000591914 CPB2Q96IY4 423 aa30.15■■■□□ 2.42
SMAD4-213ENST00000591914 ZNF558Q96NG5 402 aa30.15■■■□□ 2.42
SMAD4-213ENST00000591914 B4GALT5O43286 388 aa30.14■■■□□ 2.42
SMAD4-213ENST00000591914 OFD1O75665 1012 aa30.14■■■□□ 2.42
SMAD4-213ENST00000591914 NCLP19338 710 aaKnown RBP30.14■■■□□ 2.42
SMAD4-213ENST00000591914 NAMPTP43490 491 aa30.14■■■□□ 2.42
SMAD4-213ENST00000591914 PLCB3Q01970 1234 aa30.14■■■□□ 2.42
SMAD4-213ENST00000591914 NOMO2Q5JPE7 1267 aa30.14■■■□□ 2.42
SMAD4-213ENST00000591914 PPP4R3CPQ6ZMV5 832 aa30.14■■■□□ 2.42
SMAD4-213ENST00000591914 KCTD17Q8N5Z5 321 aa30.14■■■□□ 2.42
SMAD4-213ENST00000591914 SMG8Q8ND04 991 aaKnown RBP30.14■■■□□ 2.42
SMAD4-213ENST00000591914 CNNM3Q8NE01 707 aa30.14■■■□□ 2.42
SMAD4-213ENST00000591914 KIFAP3Q92845 792 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms