RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.28□□□□□ -0.44
SEH1L-208ENST00000590843 RNF186Q9NXI6 227 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 NRCAMQ92823 1304 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 IGSF9BQ9UPX0 1349 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 PRPSAP2O60256 369 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 DUSP11O75319 330 aaKnown RBP12.28□□□□□ -0.44
SEH1L-208ENST00000590843 MAP7Q14244 749 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 CASC4Q6P4E1 433 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 IRF2BPLQ9H1B7 796 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 MMP1P03956 469 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 THP07101 528 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 PEX6Q13608 980 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 DNAJC24Q6P3W2 148 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 RASGRP4Q8TDF6 673 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 KIF2CQ99661 725 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 GPR20Q99678 358 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 CCL23P55773 120 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 NFIAQ12857 509 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 GRIK4Q16099 956 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 EXOC3L4Q17RC7 722 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 NFRKBQ6P4R8 1299 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 ACER1Q8TDN7 264 aa12.28□□□□□ -0.44
SEH1L-208ENST00000590843 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.28□□□□□ -0.44
SEH1L-208ENST00000590843 AGO2Q9UKV8 859 aaKnown RBP12.28□□□□□ -0.44
SEH1L-208ENST00000590843 CYP21A2P08686 494 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 SLC2A3P11169 496 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 ELNP15502 786 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 DDIT3P35638 169 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 VEGFBP49765 207 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 ALDH5A1P51649 535 aaPredicted RBP12.27□□□□□ -0.44
SEH1L-208ENST00000590843 ATF7IP2Q5U623 682 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 VPS50Q96JG6 964 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 TBC1D32Q96NH3 1257 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 TAAR1Q96RJ0 339 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 HCN4Q9Y3Q4 1203 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 CAMTA1Q9Y6Y1 1673 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.27□□□□□ -0.44
SEH1L-208ENST00000590843 EVCP57679 992 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 FBXO18Q8NFZ0 1043 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 DHTKD1Q96HY7 919 aaPredicted RBP12.27□□□□□ -0.44
SEH1L-208ENST00000590843 UROC1Q96N76 676 aa12.27□□□□□ -0.44
SEH1L-208ENST00000590843 DIS3Q9Y2L1 958 aaKnown RBP12.27□□□□□ -0.44
SEH1L-208ENST00000590843 MYL4P12829 197 aa12.27□□□□□ -0.45
SEH1L-208ENST00000590843 SNRPFP62306 86 aaKnown RBP12.27□□□□□ -0.45
SEH1L-208ENST00000590843 TMEM62Q0P6H9 643 aa12.27□□□□□ -0.45
SEH1L-208ENST00000590843 ATL2Q8NHH9 583 aa12.27□□□□□ -0.45
SEH1L-208ENST00000590843 EMILIN3Q9NT22 766 aa12.27□□□□□ -0.45
SEH1L-208ENST00000590843 NR2E1Q9Y466 385 aa12.27□□□□□ -0.45
SEH1L-208ENST00000590843 AFPP02771 609 aaKnown RBP12.27□□□□□ -0.45
SEH1L-208ENST00000590843 ACTR2P61160 394 aa12.27□□□□□ -0.45
SEH1L-208ENST00000590843 FKBP3Q00688 224 aaKnown RBP12.27□□□□□ -0.45
SEH1L-208ENST00000590843 RWDD4Q6NW29 188 aaKnown RBP12.27□□□□□ -0.45
SEH1L-208ENST00000590843 GLYCTKQ8IVS8 523 aa12.27□□□□□ -0.45
SEH1L-208ENST00000590843 GPD1LQ8N335 351 aa12.27□□□□□ -0.45
SEH1L-208ENST00000590843 GPATCH11Q8N954 259 aa12.27□□□□□ -0.45
SEH1L-208ENST00000590843 SEPT10Q9P0V9 454 aa12.27□□□□□ -0.45
SEH1L-208ENST00000590843 CKBP12277 381 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 SLC11A2P49281 568 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 PTPN11Q06124 597 aaPredicted RBP12.26□□□□□ -0.45
SEH1L-208ENST00000590843 UVSSAQ2YD98 709 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 SNX19Q92543 992 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 LSM14BQ9BX40 385 aaKnown RBP12.26□□□□□ -0.45
SEH1L-208ENST00000590843 FAM217BQ9NTX9 383 aaPredicted RBP12.26□□□□□ -0.45
SEH1L-208ENST00000590843 AHDC1Q5TGY3 1603 aaPredicted RBP12.26□□□□□ -0.45
SEH1L-208ENST00000590843 POLR1AO95602 1720 aaPredicted RBP12.26□□□□□ -0.45
SEH1L-208ENST00000590843 PDHBP11177 359 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 ITGA7Q13683 1181 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 ENOSF1Q7L5Y1 443 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 TMEM35BQ8NCS4 154 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
SEH1L-208ENST00000590843 SPACA7Q96KW9 195 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 PLCD4Q9BRC7 762 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 GHRP10912 638 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 SYT1P21579 422 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 LRRC43Q8N309 656 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 C1QTNF7Q9BXJ2 289 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 MAGEB5Q9BZ81 275 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 NPTXRO95502 500 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 CRHR2Q13324 411 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 NSUN7Q8NE18 718 aaKnown RBP12.26□□□□□ -0.45
SEH1L-208ENST00000590843 ATP8B4Q8TF62 1192 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 PCIF1Q9H4Z3 704 aa12.26□□□□□ -0.45
SEH1L-208ENST00000590843 RPN1P04843 607 aaKnown RBP12.25□□□□□ -0.45
SEH1L-208ENST00000590843 MAP7D1Q3KQU3 841 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 RGL4Q8IZJ4 473 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 FOPNLQ96NB1 174 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 RBAKQ9NYW8 714 aaPredicted RBP12.25□□□□□ -0.45
SEH1L-208ENST00000590843 PLA2G4CQ9UP65 541 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 BCL9LQ86UU0 1499 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 SLC16A4O15374 487 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 B3GAT3O94766 335 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 EYA4O95677 639 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 CD58P19256 250 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 MUTP22033 750 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 RTP1P59025 263 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 CXCL17Q6UXB2 119 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 SCARA5Q6ZMJ2 495 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 ZNF467Q7Z7K2 595 aaPredicted RBP12.25□□□□□ -0.45
SEH1L-208ENST00000590843 ATP2A3Q93084 1043 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 EIF2AK1Q9BQI3 630 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms