RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 CWH43Q9H720 699 aa24.81■■□□□ 1.56
MBD3-208ENST00000590830 RWDD3Q9Y3V2 267 aa24.81■■□□□ 1.56
MBD3-208ENST00000590830 GRIN1Q05586 938 aa24.8■■□□□ 1.56
MBD3-208ENST00000590830 SF3A1Q15459 793 aaKnown RBP24.8■■□□□ 1.56
MBD3-208ENST00000590830 AMHR2Q16671 573 aa24.8■■□□□ 1.56
MBD3-208ENST00000590830 MRPL38Q96DV4 380 aaKnown RBP24.8■■□□□ 1.56
MBD3-208ENST00000590830 PLVAPQ9BX97 442 aa24.8■■□□□ 1.56
MBD3-208ENST00000590830 NFKBIZQ9BYH8 718 aa24.8■■□□□ 1.56
MBD3-208ENST00000590830 TMEM117Q9H0C3 514 aa24.8■■□□□ 1.56
MBD3-208ENST00000590830 FAM105AQ9NUU6 356 aa24.8■■□□□ 1.56
MBD3-208ENST00000590830 CLIC4Q9Y696 253 aa24.8■■□□□ 1.56
MBD3-208ENST00000590830 MEIS3P2A8K0S8 358 aa24.79■■□□□ 1.56
MBD3-208ENST00000590830 TSPAN1O60635 241 aa24.79■■□□□ 1.56
MBD3-208ENST00000590830 ZNF623O75123 536 aa24.79■■□□□ 1.56
MBD3-208ENST00000590830 EYA4O95677 639 aa24.79■■□□□ 1.56
MBD3-208ENST00000590830 LONRF3Q496Y0 759 aa24.79■■□□□ 1.56
MBD3-208ENST00000590830 HYIQ5T013 277 aa24.79■■□□□ 1.56
MBD3-208ENST00000590830 LPPQ93052 612 aa24.79■■□□□ 1.56
MBD3-208ENST00000590830 C11orf84Q9BUA3 381 aaPredicted RBP24.79■■□□□ 1.56
MBD3-208ENST00000590830 ALG13Q9NP73 1137 aaKnown RBP24.79■■□□□ 1.56
MBD3-208ENST00000590830 PLAGL2Q9UPG8 496 aa24.79■■□□□ 1.56
MBD3-208ENST00000590830 DNM3Q9UQ16 869 aa24.79■■□□□ 1.56
MBD3-208ENST00000590830 INO80B-WBP1J3KQ70 363 aa24.78■■□□□ 1.56
MBD3-208ENST00000590830 DNAJB1P25685 340 aa24.78■■□□□ 1.56
MBD3-208ENST00000590830 CAMK1Q14012 370 aa24.78■■□□□ 1.56
MBD3-208ENST00000590830 KLHL23Q8NBE8 558 aa24.78■■□□□ 1.56
MBD3-208ENST00000590830 HELQQ8TDG4 1101 aa24.78■■□□□ 1.56
MBD3-208ENST00000590830 PCDHB2Q9Y5E7 798 aa24.78■■□□□ 1.56
MBD3-208ENST00000590830 FNDC1Q4ZHG4 1894 aaPredicted RBP24.77■■□□□ 1.56
MBD3-208ENST00000590830 HOXA2O43364 376 aa24.77■■□□□ 1.56
MBD3-208ENST00000590830 STX6O43752 255 aa24.77■■□□□ 1.56
MBD3-208ENST00000590830 ITGB1P05556 798 aa24.77■■□□□ 1.56
MBD3-208ENST00000590830 PTPAQ15257 358 aa24.77■■□□□ 1.56
MBD3-208ENST00000590830 ZRSR1Q15695 479 aaKnown RBP24.77■■□□□ 1.56
MBD3-208ENST00000590830 MRPL10Q7Z7H8 261 aaKnown RBP24.77■■□□□ 1.56
MBD3-208ENST00000590830 HSCBQ8IWL3 235 aa24.77■■□□□ 1.56
MBD3-208ENST00000590830 SPPL3Q8TCT6 385 aa24.77■■□□□ 1.56
MBD3-208ENST00000590830 P2RX5Q93086 422 aa24.77■■□□□ 1.56
MBD3-208ENST00000590830 CPB2Q96IY4 423 aa24.77■■□□□ 1.56
MBD3-208ENST00000590830 PLIN2Q99541 437 aa24.77■■□□□ 1.56
MBD3-208ENST00000590830 NLRC5Q86WI3 1866 aa24.77■■□□□ 1.56
MBD3-208ENST00000590830 LRRIQ4A6NIV6 560 aa24.76■■□□□ 1.55
MBD3-208ENST00000590830 B4GALT5O43286 388 aa24.76■■□□□ 1.55
MBD3-208ENST00000590830 PTPROQ16827 1216 aa24.76■■□□□ 1.55
MBD3-208ENST00000590830 NAALADL2Q58DX5 795 aa24.76■■□□□ 1.55
MBD3-208ENST00000590830 CDCA2Q69YH5 1023 aaPredicted RBP24.76■■□□□ 1.55
MBD3-208ENST00000590830 RUSC1Q9BVN2 902 aa24.76■■□□□ 1.55
MBD3-208ENST00000590830 XIRP2A4UGR9 3374 aa24.76■■□□□ 1.55
MBD3-208ENST00000590830 RALGAPA2Q2PPJ7 1873 aa24.75■■□□□ 1.55
MBD3-208ENST00000590830 ERLIN2O94905 339 aa24.75■■□□□ 1.55
MBD3-208ENST00000590830 BMP15O95972 392 aa24.75■■□□□ 1.55
MBD3-208ENST00000590830 SKIP12755 728 aa24.75■■□□□ 1.55
MBD3-208ENST00000590830 PCBP1Q15365 356 aaKnown RBP eCLIP24.75■■□□□ 1.553e-6■■■■□ 23.3
MBD3-208ENST00000590830 SKIV2LQ15477 1246 aaKnown RBP24.75■■□□□ 1.55
MBD3-208ENST00000590830 SPOUT1Q5T280 376 aaKnown RBP24.75■■□□□ 1.55
MBD3-208ENST00000590830 AGMOQ6ZNB7 445 aa24.75■■□□□ 1.55
MBD3-208ENST00000590830 C1orf186Q6ZWK4 172 aa24.75■■□□□ 1.55
MBD3-208ENST00000590830 DAW1Q8N136 415 aa24.75■■□□□ 1.55
MBD3-208ENST00000590830 COLGALT1Q8NBJ5 622 aa24.75■■□□□ 1.55
MBD3-208ENST00000590830 LRRC15Q8TF66 581 aa24.75■■□□□ 1.55
MBD3-208ENST00000590830 AK8Q96MA6 479 aa24.75■■□□□ 1.55
MBD3-208ENST00000590830 EIF2AQ9BY44 585 aaKnown RBP24.75■■□□□ 1.55
MBD3-208ENST00000590830 FZD8Q9H461 694 aa24.75■■□□□ 1.55
MBD3-208ENST00000590830 TTLL13PA6NNM8 815 aa24.74■■□□□ 1.55
MBD3-208ENST00000590830 OFD1O75665 1012 aa24.74■■□□□ 1.55
MBD3-208ENST00000590830 ARF4P18085 180 aaPredicted RBP24.74■■□□□ 1.55
MBD3-208ENST00000590830 RAB27AP51159 221 aa24.74■■□□□ 1.55
MBD3-208ENST00000590830 TMEM119Q4V9L6 283 aa24.74■■□□□ 1.55
MBD3-208ENST00000590830 RINT1Q6NUQ1 792 aa24.74■■□□□ 1.55
MBD3-208ENST00000590830 CABP7Q86V35 215 aa24.74■■□□□ 1.55
MBD3-208ENST00000590830 ABI1Q8IZP0 508 aa24.74■■□□□ 1.55
MBD3-208ENST00000590830 SMG8Q8ND04 991 aaKnown RBP24.74■■□□□ 1.55
MBD3-208ENST00000590830 LMAN2LQ9H0V9 348 aa24.74■■□□□ 1.55
MBD3-208ENST00000590830 AXLP30530 894 aa24.73■■□□□ 1.55
MBD3-208ENST00000590830 AFF1P51825 1210 aaKnown RBP24.73■■□□□ 1.55
MBD3-208ENST00000590830 TFF2Q03403 129 aa24.73■■□□□ 1.55
MBD3-208ENST00000590830 TCEAL5Q5H9L2 206 aa24.73■■□□□ 1.55
MBD3-208ENST00000590830 RNF39Q9H2S5 420 aa24.73■■□□□ 1.55
MBD3-208ENST00000590830 THEGQ9P2T0 379 aa24.73■■□□□ 1.55
MBD3-208ENST00000590830 USP20Q9Y2K6 914 aa24.73■■□□□ 1.55
MBD3-208ENST00000590830 PCDHB12Q9Y5F1 795 aa24.73■■□□□ 1.55
MBD3-208ENST00000590830 VCANP13611 3396 aa24.73■■□□□ 1.55
MBD3-208ENST00000590830 KIAA1671Q9BY89 1806 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 EDN1P05305 212 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 LONP1P36776 959 aaKnown RBP24.72■■□□□ 1.55
MBD3-208ENST00000590830 PBX3P40426 434 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 NAMPTP43490 491 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 CEBPZQ03701 1054 aaKnown RBP24.72■■□□□ 1.55
MBD3-208ENST00000590830 MAPK7Q13164 816 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 NOTUMQ6P988 496 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 PPP4R3CPQ6ZMV5 832 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 CDR2LQ86X02 465 aaPredicted RBP24.72■■□□□ 1.55
MBD3-208ENST00000590830 LRRC43Q8N309 656 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 SYT2Q8N9I0 419 aaPredicted RBP24.72■■□□□ 1.55
MBD3-208ENST00000590830 POF1BQ8WVV4 589 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 KIFAP3Q92845 792 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 KIFC3Q9BVG8 833 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 CCDC113Q9H0I3 377 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 CSRNP2Q9H175 543 aa24.72■■□□□ 1.55
MBD3-208ENST00000590830 AAASQ9NRG9 546 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms