RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 FRMD3A2A2Y4 597 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 LINC01553A4QN01 128 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 RRN3P2A6NIE6 340 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 CAND2O75155 1236 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 SMC2O95347 1197 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 INSRRP14616 1297 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 MKRN4PQ13434 485 aaPredicted RBP18.36■□□□□ 0.53
GCDH-213ENST00000590627 GIT2Q14161 759 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 MTERF2Q49AM1 385 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 MCPH1Q8NEM0 835 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 DBF4BQ8NFT6 615 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 GSDMAQ96QA5 445 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 BLZF1Q9H2G9 400 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 SUGCTQ9HAC7 445 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 INSL6Q9Y581 213 aa18.36■□□□□ 0.53
GCDH-213ENST00000590627 NRCAMQ92823 1304 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 IGKV6-21A0A0C4DH24 114 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 KLRC4O43908 158 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 MAFO75444 373 aaPredicted RBP18.35■□□□□ 0.53
GCDH-213ENST00000590627 AMHP03971 560 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 SMIM10L2AP0DMW4 78 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 SMIM10L2BP0DMW5 78 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 CASP1P29466 404 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 THPOP40225 353 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 PPFIA1Q13136 1202 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 PLEKHG4Q58EX7 1191 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 UNC13DQ70J99 1090 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 GDPD5Q8WTR4 605 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 SMARCE1Q969G3 411 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 SH2D3AQ9BRG2 576 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 C1QTNF1Q9BXJ1 281 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 ATP6V0A4Q9HBG4 840 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 ODF2LQ9ULJ1 636 aa18.35■□□□□ 0.53
GCDH-213ENST00000590627 BRWD1Q9NSI6 2320 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.34■□□□□ 0.53
GCDH-213ENST00000590627 NPHP3-ACAD11A0A0J9YXS1 232 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 MAGEB2O15479 319 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 GAS2O43903 313 aaKnown RBP18.34■□□□□ 0.53
GCDH-213ENST00000590627 USO1O60763 962 aaKnown RBP18.34■□□□□ 0.53
GCDH-213ENST00000590627 RPN1P04843 607 aaKnown RBP18.34■□□□□ 0.53
GCDH-213ENST00000590627 KRT18P05783 430 aaKnown RBP18.34■□□□□ 0.53
GCDH-213ENST00000590627 GNAT1P11488 350 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 ZNF131P52739 623 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 ASIC1P78348 528 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 TBC1D8BQ0IIM8 1120 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 KCNB1Q14721 858 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 EMC2Q15006 297 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 GRIK4Q16099 956 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 ZSCAN23Q3MJ62 389 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.34■□□□□ 0.53
GCDH-213ENST00000590627 DYMQ7RTS9 669 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 SLC7A3Q8WY07 619 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 JPH2Q9BR39 696 aaPredicted RBP18.34■□□□□ 0.53
GCDH-213ENST00000590627 REEP2Q9BRK0 252 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 XPNPEP1Q9NQW7 623 aa18.34■□□□□ 0.53
GCDH-213ENST00000590627 MBLAC1A4D2B0 266 aaPredicted RBP18.33■□□□□ 0.52
GCDH-213ENST00000590627 TREHO43280 583 aa18.33■□□□□ 0.52
GCDH-213ENST00000590627 C22orf31O95567 290 aa18.33■□□□□ 0.52
GCDH-213ENST00000590627 POLGP54098 1239 aaPredicted RBP18.33■□□□□ 0.52
GCDH-213ENST00000590627 ADAM17P78536 824 aa18.33■□□□□ 0.52
GCDH-213ENST00000590627 HTRA4P83105 476 aaPredicted RBP18.33■□□□□ 0.52
GCDH-213ENST00000590627 EHHADHQ08426 723 aa18.33■□□□□ 0.52
GCDH-213ENST00000590627 MAPK7Q13164 816 aa18.33■□□□□ 0.52
GCDH-213ENST00000590627 MARCH8Q5T0T0 291 aa18.33■□□□□ 0.52
GCDH-213ENST00000590627 FAM117BQ6P1L5 589 aa18.33■□□□□ 0.52
GCDH-213ENST00000590627 SP7Q8TDD2 431 aaPredicted RBP18.33■□□□□ 0.52
GCDH-213ENST00000590627 SEPT8Q92599 483 aa18.33■□□□□ 0.52
GCDH-213ENST00000590627 ERCC4Q92889 916 aaPredicted RBP18.33■□□□□ 0.52
GCDH-213ENST00000590627 RMND1Q9NWS8 449 aa18.33■□□□□ 0.52
GCDH-213ENST00000590627 MTUS1Q9ULD2 1270 aa18.33■□□□□ 0.52
GCDH-213ENST00000590627 COL4A3BPQ9Y5P4 624 aa18.33■□□□□ 0.52
GCDH-213ENST00000590627 HIP1RO75146 1068 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 RHOBTB3O94955 611 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 GAP43P17677 238 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 MTHFD1LQ6UB35 978 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 CCDC65Q8IXS2 484 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 MYOCDQ8IZQ8 938 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 DAW1Q8N136 415 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 LINC01465Q8N7H1 131 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 TRIML1Q8N9V2 468 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 LMBR1Q8WVP7 490 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 TRAPPC12Q8WVT3 735 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 KIFAP3Q92845 792 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 CCDC47Q96A33 483 aaKnown RBP18.32■□□□□ 0.52
GCDH-213ENST00000590627 DRC1Q96MC2 740 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 SAMD11Q96NU1 681 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 ANP32EQ9BTT0 268 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 GTPBP4Q9BZE4 634 aaKnown RBP18.32■□□□□ 0.52
GCDH-213ENST00000590627 C17orf75Q9HAS0 396 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 PANK4Q9NVE7 773 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 MAN1B1Q9UKM7 699 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 ARID2Q68CP9 1835 aa18.32■□□□□ 0.52
GCDH-213ENST00000590627 TBCAO75347 108 aaKnown RBP18.31■□□□□ 0.52
GCDH-213ENST00000590627 IDEP14735 1019 aa18.31■□□□□ 0.52
GCDH-213ENST00000590627 KLRC1P26715 233 aa18.31■□□□□ 0.52
GCDH-213ENST00000590627 ARL2P36404 184 aa18.31■□□□□ 0.52
GCDH-213ENST00000590627 RAD51AP2Q09MP3 1159 aa18.31■□□□□ 0.52
GCDH-213ENST00000590627 KMT5BQ4FZB7 885 aa18.31■□□□□ 0.52
GCDH-213ENST00000590627 IER5Q5VY09 327 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms