RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 CTTNQ14247 550 aaKnown RBP13.39□□□□□ -0.27
PDE4A-207ENST00000590407 CYP1B1Q16678 543 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 CBWD6Q4V339 395 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 CBWD3Q5JTY5 395 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 SLC27A3Q5K4L6 730 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 CBWD5Q5RIA9 395 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 GKAP1Q5VSY0 366 aaPredicted RBP13.39□□□□□ -0.27
PDE4A-207ENST00000590407 B3GNT9Q6UX72 402 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 ZDHHC24Q6UX98 284 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 PODNQ7Z5L7 613 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 COL23A1Q86Y22 540 aaPredicted RBP13.39□□□□□ -0.27
PDE4A-207ENST00000590407 JAMLQ86YT9 394 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 CCDC50Q8IVM0 306 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 ARHGEF26Q96DR7 871 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 C8orf37Q96NL8 207 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 XPO6Q96QU8 1125 aaKnown RBP13.39□□□□□ -0.27
PDE4A-207ENST00000590407 AGPAT1Q99943 283 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 NCAPGQ9BPX3 1015 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 TRIM51Q9BSJ1 452 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 POLD4Q9HCU8 107 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 GEMIN8Q9NWZ8 242 aaKnown RBP13.39□□□□□ -0.27
PDE4A-207ENST00000590407 NR2E1Q9Y466 385 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 ANKRD31Q8N7Z5 1873 aa13.39□□□□□ -0.27
PDE4A-207ENST00000590407 DDTLA6NHG4 134 aaPredicted RBP13.38□□□□□ -0.27
PDE4A-207ENST00000590407 ASAP2O43150 1006 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 NPR1P16066 1061 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 HMGB2P26583 209 aaKnown RBP13.38□□□□□ -0.27
PDE4A-207ENST00000590407 TMOD1P28289 359 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 POLD1P28340 1107 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 MMP13P45452 471 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 MNAT1P51948 309 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 PMS2P54278 862 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 ABCB5Q2M3G0 1257 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 ANKRD20A8PQ5CZ79 823 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 LRCH2Q5VUJ6 765 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 FAM178BQ8IXR5 827 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 UBL4BQ8N7F7 174 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 CHMP6Q96FZ7 201 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 WDR18Q9BV38 432 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 DPH5Q9H2P9 285 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 EHMT1Q9H9B1 1298 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 GRHL1Q9NZI5 618 aa13.38□□□□□ -0.27
PDE4A-207ENST00000590407 AGTP01019 485 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 SNRPFP62306 86 aaKnown RBP13.37□□□□□ -0.27
PDE4A-207ENST00000590407 ADCY2Q08462 1091 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 QPCTQ16769 361 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 ZC2HC1CQ53FD0 456 aaPredicted RBP13.37□□□□□ -0.27
PDE4A-207ENST00000590407 TNFAIP8L3Q5GJ75 292 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 C6orf118Q5T5N4 469 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 DENND2CQ68D51 928 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 INTS8Q75QN2 995 aaKnown RBP13.37□□□□□ -0.27
PDE4A-207ENST00000590407 CYP2W1Q8TAV3 490 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 ALG3Q92685 438 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 DYDC2Q96IM9 177 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 ZNF317Q96PQ6 595 aaPredicted RBP13.37□□□□□ -0.27
PDE4A-207ENST00000590407 ZSWIM1Q9BR11 485 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 THAP2Q9H0W7 228 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 STMN4Q9H169 189 aaPredicted RBP13.37□□□□□ -0.27
PDE4A-207ENST00000590407 WNT8AQ9H1J5 351 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 BCAS3Q9H6U6 928 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 KLC4Q9NSK0 619 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 BCCIPQ9P287 314 aaKnown RBP eCLIP13.37□□□□□ -0.27
PDE4A-207ENST00000590407 COG5Q9UP83 839 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 ATP8A1Q9Y2Q0 1164 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 ALG6Q9Y672 507 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 DNAJC8O75937 253 aaPredicted RBP13.37□□□□□ -0.27
PDE4A-207ENST00000590407 GSTA1P08263 222 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 GZMAP12544 262 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 XRCC4Q13426 336 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 ITIH4Q14624 930 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 PTPROQ16827 1216 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 USH1GQ495M9 461 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 PRELID2Q8N945 189 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 C12orf50Q8NA57 414 aaPredicted RBP13.37□□□□□ -0.27
PDE4A-207ENST00000590407 PIGOQ8TEQ8 1089 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 CCT6BQ92526 530 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 DEFB129Q9H1M3 183 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 ERVK-5Q9HDB9 667 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 SLC40A1Q9NP59 571 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 MTRF1LQ9UGC7 380 aaKnown RBP13.37□□□□□ -0.27
PDE4A-207ENST00000590407 PRR12Q9ULL5 1215 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 PCDHA3Q9Y5H8 950 aa13.37□□□□□ -0.27
PDE4A-207ENST00000590407 SFI1A8K8P3 1242 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 DCDC2CA8MYV0 355 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 FOXN3O00409 490 aaPredicted RBP13.36□□□□□ -0.27
PDE4A-207ENST00000590407 CAND2O75155 1236 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 RTN2O75298 545 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 ENTPD3O75355 529 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 KRT13P13646 458 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 ABCB4P21439 1286 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 ALDH1B1P30837 517 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 PEX5P50542 639 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 GPC5P78333 572 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 CETN1Q12798 172 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 SLMAPQ14BN4 828 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 EPC2Q52LR7 807 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 STRIP1Q5VSL9 837 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 MFSD5Q6N075 450 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms