RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 LRRIQ4A6NIV6 560 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 ZSCAN20P17040 1043 aaPredicted RBP20.72■□□□□ 0.91
MBD1-223ENST00000590215 HOXA11P31270 313 aaPredicted RBP20.72■□□□□ 0.91
MBD1-223ENST00000590215 NPTX2P47972 431 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 SARSP49591 514 aaKnown RBP20.72■□□□□ 0.91
MBD1-223ENST00000590215 ZNF131P52739 623 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 HTRA4P83105 476 aaPredicted RBP20.72■□□□□ 0.91
MBD1-223ENST00000590215 GIT2Q14161 759 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 RAB30Q15771 203 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 FAM187BQ17R55 369 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 PPP4R3CPQ6ZMV5 832 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 SV2BQ7L1I2 683 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 PDILTQ8N807 584 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 SPIRE2Q8WWL2 714 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 KCNN1Q92952 543 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 FZD8Q9H461 694 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 FAM13BQ9NYF5 915 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 KCNG1Q9UIX4 513 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 NPHP3-ACAD11A0A0J9YXS1 232 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 A0A1W2PQ27 194 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 A0A1W2PQ64 194 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 A0A1W2PQD8 194 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 INO80B-WBP1J3KQ70 363 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 PLS3P13797 630 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 DNAJB2P25686 324 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 AXLP30530 894 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 PBX2P40425 430 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 RABGGTBP53611 331 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 DMP1Q13316 513 aaPredicted RBP20.71■□□□□ 0.91
MBD1-223ENST00000590215 DHX8Q14562 1220 aaKnown RBP20.71■□□□□ 0.91
MBD1-223ENST00000590215 TMCO2Q7Z6W1 182 aaPredicted RBP20.71■□□□□ 0.91
MBD1-223ENST00000590215 NPAS4Q8IUM7 802 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 ZBTB8OSQ8IWT0 167 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 IQUBQ8NA54 791 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 PRIMPOLQ96LW4 560 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 RAD9AQ99638 391 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 REEP2Q9BRK0 252 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 CCDC113Q9H0I3 377 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 ELAC1Q9H777 363 aaKnown RBP20.71■□□□□ 0.91
MBD1-223ENST00000590215 DACT1Q9NYF0 836 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 ARHGAP28Q9P2N2 729 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 HPSEQ9Y251 543 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 YBX2Q9Y2T7 364 aaKnown RBP20.71■□□□□ 0.91
MBD1-223ENST00000590215 ADGRA3Q8IWK6 1321 aa20.71■□□□□ 0.91
MBD1-223ENST00000590215 TMEM265A0A087WTH1 108 aa20.7■□□□□ 0.9
MBD1-223ENST00000590215 A0A0U1RQF3 1178 aa20.7■□□□□ 0.9
MBD1-223ENST00000590215 TSPAN1O60635 241 aa20.7■□□□□ 0.9
MBD1-223ENST00000590215 EFNA5P52803 228 aa20.7■□□□□ 0.9
MBD1-223ENST00000590215 PEX3P56589 373 aa20.7■□□□□ 0.9
MBD1-223ENST00000590215 RAD51AP2Q09MP3 1159 aa20.7■□□□□ 0.9
MBD1-223ENST00000590215 DEPTORQ8TB45 409 aa20.7■□□□□ 0.9
MBD1-223ENST00000590215 PYM1Q9BRP8 204 aaKnown RBP20.7■□□□□ 0.9
MBD1-223ENST00000590215 RC3H2Q9HBD1 1191 aaKnown RBP20.7■□□□□ 0.9
MBD1-223ENST00000590215 GDPD2Q9HCC8 539 aa20.7■□□□□ 0.9
MBD1-223ENST00000590215 PRMT7Q9NVM4 692 aaPredicted RBP20.7■□□□□ 0.9
MBD1-223ENST00000590215 KBTBD4Q9NVX7 518 aa20.7■□□□□ 0.9
MBD1-223ENST00000590215 RNF216Q9NWF9 866 aaPredicted RBP20.7■□□□□ 0.9
MBD1-223ENST00000590215 MSRAQ9UJ68 235 aa20.7■□□□□ 0.9
MBD1-223ENST00000590215 KCNH3Q9ULD8 1083 aa20.7■□□□□ 0.9
MBD1-223ENST00000590215 MYMKA6NI61 221 aa20.69■□□□□ 0.9
MBD1-223ENST00000590215 SFI1A8K8P3 1242 aa20.69■□□□□ 0.9
MBD1-223ENST00000590215 POLR2DO15514 142 aaKnown RBP20.69■□□□□ 0.9
MBD1-223ENST00000590215 TLL1O43897 1013 aa20.69■□□□□ 0.9
MBD1-223ENST00000590215 ERLIN2O94905 339 aa20.69■□□□□ 0.9
MBD1-223ENST00000590215 SP7Q8TDD2 431 aaPredicted RBP20.69■□□□□ 0.9
MBD1-223ENST00000590215 DNAJC19Q96DA6 116 aa20.69■□□□□ 0.9
MBD1-223ENST00000590215 CCDC51Q96ER9 411 aa20.69■□□□□ 0.9
MBD1-223ENST00000590215 IPO9Q96P70 1041 aaKnown RBP20.69■□□□□ 0.9
MBD1-223ENST00000590215 TNMDQ9H2S6 317 aa20.69■□□□□ 0.9
MBD1-223ENST00000590215 TMEM134Q9H6X4 195 aa20.69■□□□□ 0.9
MBD1-223ENST00000590215 MAGEF1Q9HAY2 307 aa20.69■□□□□ 0.9
MBD1-223ENST00000590215 LARSQ9P2J5 1176 aaKnown RBP20.69■□□□□ 0.9
MBD1-223ENST00000590215 PIN4Q9Y237 131 aaKnown RBP20.69■□□□□ 0.9
MBD1-223ENST00000590215 INSL6Q9Y581 213 aa20.69■□□□□ 0.9
MBD1-223ENST00000590215 ACKR2O00590 384 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 ZNF623O75123 536 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 STAG3L1P0CL83 205 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 MYOGP15173 224 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 CACNB1Q02641 598 aaPredicted RBP20.68■□□□□ 0.9
MBD1-223ENST00000590215 ZNF598Q86UK7 904 aaKnown RBP20.68■□□□□ 0.9
MBD1-223ENST00000590215 ECHDC2Q86YB7 292 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 DDX12PQ92771 950 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 DHX58Q96C10 678 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 TIFAQ96CG3 184 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 ZNF689Q96CS4 500 aaPredicted RBP20.68■□□□□ 0.9
MBD1-223ENST00000590215 ZBED2Q9BTP6 218 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 KIFC3Q9BVG8 833 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 PARVGQ9HBI0 331 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 KMT5AQ9NQR1 393 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 TMEM161AQ9NX61 479 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 PHLPP2Q6ZVD8 1323 aa20.68■□□□□ 0.9
MBD1-223ENST00000590215 COL4A6Q14031 1691 aa20.67■□□□□ 0.9
MBD1-223ENST00000590215 CHD9Q3L8U1 2897 aa20.67■□□□□ 0.9
MBD1-223ENST00000590215 CCDC169A6NNP5 214 aa20.67■□□□□ 0.9
MBD1-223ENST00000590215 DGKIO75912 1065 aa20.67■□□□□ 0.9
MBD1-223ENST00000590215 UPP2O95045 317 aa20.67■□□□□ 0.9
MBD1-223ENST00000590215 KRT18P05783 430 aaKnown RBP20.67■□□□□ 0.9
MBD1-223ENST00000590215 PFKFB1P16118 471 aa20.67■□□□□ 0.9
MBD1-223ENST00000590215 ARF4P18085 180 aaPredicted RBP20.67■□□□□ 0.9
MBD1-223ENST00000590215 SMTNP53814 917 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms