RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 PPM1AP35813 382 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 PHKA2P46019 1235 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 PTPN5P54829 565 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 UBE3AQ05086 875 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 MXD4Q14582 209 aaPredicted RBP11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 PCBP1Q15365 356 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 SRGAP1Q7Z6B7 1085 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 ECHDC2Q86YB7 292 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 ADHFE1Q8IWW8 467 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 CRIPAKQ8N1N5 446 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 TBC1D32Q96NH3 1257 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 MTMR9Q96QG7 549 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 WRAP73Q9P2S5 460 aaPredicted RBP11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 FAM50BQ9Y247 325 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 CITO14578 2027 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 KMT2EQ8IZD2 1858 aa11.8□□□□□ -0.52
CLPTM1-211ENST00000589347 LAD1O00515 517 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 SLITRK3O94933 977 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 LINC00271P0C7V0 271 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 FGFR1P11362 822 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 MUTP22033 750 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 FGFR4P22455 802 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 IRS1P35568 1242 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 GATMP50440 423 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 FAM189BP81408 668 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 NCBP1Q09161 790 aaKnown RBP11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 LAMTOR4Q0VGL1 99 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 ZNF174Q15697 407 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 HERC4Q5GLZ8 1057 aaPredicted RBP11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 TCEAL5Q5H9L2 206 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 BMP8AQ7Z5Y6 402 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 FERMT3Q86UX7 667 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 THNSL1Q8IYQ7 743 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 COLGALT1Q8NBJ5 622 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 TMEM143Q96AN5 459 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 TMX3Q96JJ7 454 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 TMEM60Q9H2L4 133 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 ALG13Q9NP73 1137 aaKnown RBP11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 AGPAT5Q9NUQ2 364 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 SMC3Q9UQE7 1217 aa11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 RIF1Q5UIP0 2472 aaKnown RBP11.79□□□□□ -0.52
CLPTM1-211ENST00000589347 DMDP11532 3685 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 TRIP11Q15643 1979 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 A0A0U1RQF3 1178 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 H3BQ06 376 aaPredicted RBP11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 WNT7AO00755 349 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 GRM6O15303 877 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 USO1O60763 962 aaKnown RBP11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 CSPG5O95196 566 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 SRGAP2CP0DJJ0 459 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 XRCC6P12956 609 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 U2AF2P26368 475 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 GJB2P29033 226 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 TECP42680 631 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 FAM102BQ5T8I3 360 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 MCTP1Q6DN14 999 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 PDE12Q6L8Q7 609 aaKnown RBP11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 EP400NLQ6ZTU2 488 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 KLHL23Q8NBE8 558 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 RNF149Q8NC42 400 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 MCPH1Q8NEM0 835 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 POF1BQ8WVV4 589 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 PRPF31Q8WWY3 499 aaKnown RBP11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 PABPC5Q96DU9 382 aaKnown RBP11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 CCDC51Q96ER9 411 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 ZNF558Q96NG5 402 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 NACC1Q96RE7 527 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 HSD17B14Q9BPX1 270 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 POLR3CQ9BUI4 534 aaPredicted RBP11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 TRAIPQ9BWF2 469 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 PLAGL2Q9UPG8 496 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 CNTNAP2Q9UHC6 1331 aa11.78□□□□□ -0.52
CLPTM1-211ENST00000589347 PTPRZ1P23471 2315 aaPredicted RBP11.77□□□□□ -0.52
CLPTM1-211ENST00000589347 GVINP1Q7Z2Y8 2422 aa11.77□□□□□ -0.52
CLPTM1-211ENST00000589347 ARHGEF35A5YM69 484 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 ITGB1P05556 798 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 SRGAP2BP0DMP2 458 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 RPA1P27694 616 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 AXLP30530 894 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 RARRES1P49788 294 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 FXR2P51116 673 aaKnown RBP eCLIP11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 TCF15Q12870 199 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 BMS1Q14692 1282 aaKnown RBP11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 RILPL1Q5EBL4 403 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 GLB1LQ6UWU2 654 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 KSR1Q8IVT5 923 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 ZBTB8OSQ8IWT0 167 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 HACE1Q8IYU2 909 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 CNNM3Q8NE01 707 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 URGCPQ8TCY9 931 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 HELQQ8TDG4 1101 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 PRRX2Q99811 253 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 POLR3FQ9H1D9 316 aaPredicted RBP11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 TLR9Q9NR96 1032 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 FAM105AQ9NUU6 356 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 TYW1Q9NV66 732 aaKnown RBP11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 CLDND1Q9NY35 253 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 PUF60Q9UHX1 559 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms