RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 MFSD5Q6N075 450 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 ZBTB8OSQ8IWT0 167 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 TMEM161BQ8NDZ6 487 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 SCLT1Q96NL6 688 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 FIZ1Q96SL8 496 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 MRPL44Q9H9J2 332 aaKnown RBP13.42□□□□□ -0.26
DNMT1-218ENST00000589294 PRDM5Q9NQX1 630 aaPredicted RBP13.42□□□□□ -0.26
DNMT1-218ENST00000589294 EXOC1Q9NV70 894 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 ARHGAP28Q9P2N2 729 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 GINS2Q9Y248 185 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 GPR182O15218 404 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 SLC16A4O15374 487 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 CTSHP09668 335 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 CYP2C18P33260 490 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 GTF2BQ00403 316 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 NCBP1Q09161 790 aaKnown RBP13.41□□□□□ -0.26
DNMT1-218ENST00000589294 FAM187BQ17R55 369 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 FBXO47Q5MNV8 452 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 FAM26FQ5R3K3 315 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 CCDC183Q5T5S1 534 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 STXBP4Q6ZWJ1 553 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 HAUS6Q7Z4H7 955 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 SFR1Q86XK3 245 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 C7orf61Q8IZ16 206 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 TMEM199Q8N511 208 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 OSMRQ99650 979 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 STRA6Q9BX79 667 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 FZD8Q9H461 694 aa13.41□□□□□ -0.26
DNMT1-218ENST00000589294 RPS6KA5O75582 802 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 LETM1O95202 739 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-218ENST00000589294 CXCL10P02778 98 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 SFPQP23246 707 aaKnown RBP eCLIP13.4□□□□□ -0.26
DNMT1-218ENST00000589294 CCL23P55773 120 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 MBTD1Q05BQ5 628 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 LPIN1Q14693 890 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 MBTPS1Q14703 1052 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 MAPK6Q16659 721 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 TSHZ1Q6ZSZ6 1077 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 RPUSD2Q8IZ73 545 aaKnown RBP13.4□□□□□ -0.26
DNMT1-218ENST00000589294 TRIML1Q8N9V2 468 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 HVCN1Q96D96 273 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 ZNF668Q96K58 619 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-218ENST00000589294 PRIMPOLQ96LW4 560 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 PPP1R16BQ96T49 567 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 PPP1R12CQ9BZL4 782 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 WNT8AQ9H1J5 351 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 MINDY3Q9H8M7 445 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 PRMT7Q9NVM4 692 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-218ENST00000589294 TBX20Q9UMR3 447 aa13.4□□□□□ -0.26
DNMT1-218ENST00000589294 NOC2LQ9Y3T9 749 aaKnown RBP13.4□□□□□ -0.26
DNMT1-218ENST00000589294 UMODL1Q5DID0 1318 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 DENND3A2RUS2 1198 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 INO80B-WBP1J3KQ70 363 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 ACKR2O00590 384 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 EIF3DO15371 548 aaKnown RBP eCLIP13.39□□□□□ -0.27
DNMT1-218ENST00000589294 KIF20AO95235 890 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 ITGB8P26012 769 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 NMT1P30419 496 aaKnown RBP13.39□□□□□ -0.27
DNMT1-218ENST00000589294 AXLP30530 894 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 STRN3Q13033 797 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 STK4Q13043 487 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 GPNMBQ14956 572 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 ZNF658Q5TYW1 1059 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-218ENST00000589294 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 RBM43Q6ZSC3 357 aaKnown RBP13.39□□□□□ -0.27
DNMT1-218ENST00000589294 EPM2AIP1Q7L775 607 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-218ENST00000589294 ZNF507Q8TCN5 953 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 TMEM40Q8WWA1 233 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 ERCC4Q92889 916 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-218ENST00000589294 KIFC3Q9BVG8 833 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 CCDC113Q9H0I3 377 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 SLC39A2Q9NP94 309 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 CHST12Q9NRB3 414 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 TBC1D7Q9P0N9 293 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 PADI3Q9ULW8 664 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 ST3GAL5Q9UNP4 418 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 ADGRA3Q8IWK6 1321 aa13.39□□□□□ -0.27
DNMT1-218ENST00000589294 K7ENM7 598 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 NBNO60934 754 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 PPP1R37O75864 691 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 GCNT3O95395 438 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 PFKMP08237 780 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 GHRP10912 638 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 PAK2Q13177 524 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 MORC3Q14149 939 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 COBLL1Q53SF7 1204 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 PLEKHG4Q58EX7 1191 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
DNMT1-218ENST00000589294 CATSPER4Q7RTX7 472 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 FAM228AQ86W67 206 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 SEPT8Q92599 483 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 APBB2Q92870 758 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 HPS3Q969F9 1004 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 SCLYQ96I15 445 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 ACCSQ96QU6 501 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 FTHL17Q9BXU8 183 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 TMEM206Q9H813 350 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 AGO3Q9H9G7 860 aaKnown RBP13.38□□□□□ -0.27
DNMT1-218ENST00000589294 ERVK-5Q9HDB9 667 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms