RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 RIT2Q99578 217 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 LRRC1Q9BTT6 524 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 RANBP17Q9H2T7 1088 aaKnown RBP8.06□□□□□ -1.12
ZNF540-206ENST00000589117 VCPKMTQ9H867 229 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 GCNT4Q9P109 453 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 ZBTB21Q9ULJ3 1066 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 ARHGEF35A5YM69 484 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 HSF2BPO75031 334 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 H2AFZP0C0S5 128 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 SLC9A1P19634 815 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 LMNB1P20700 586 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 APBA1Q02410 837 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 PPFIA1Q13136 1202 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 PAK2Q13177 524 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 CTTNQ14247 550 aaKnown RBP8.06□□□□□ -1.12
ZNF540-206ENST00000589117 CLUL1Q15846 466 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 ZSCAN26Q16670 478 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 SHROOM1Q2M3G4 852 aaPredicted RBP8.06□□□□□ -1.12
ZNF540-206ENST00000589117 MUM1L1Q5H9M0 696 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 ODR4Q5SWX8 454 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 MEI1Q5TIA1 1274 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 CCDC174Q6PII3 467 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 C1orf186Q6ZWK4 172 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 H2AFVQ71UI9 128 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 IRF2BP2Q7Z5L9 587 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 ZBTB33Q86T24 672 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 FAM83AQ86UY5 434 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 SAMD3Q8N6K7 520 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 CYP2W1Q8TAV3 490 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 PIGOQ8TEQ8 1089 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 DYDC2Q96IM9 177 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 PSMB7Q99436 277 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 RUSC1Q9BVN2 902 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 LARSQ9P2J5 1176 aaKnown RBP8.06□□□□□ -1.12
ZNF540-206ENST00000589117 ZNF70Q9UC06 446 aaPredicted RBP8.06□□□□□ -1.12
ZNF540-206ENST00000589117 NAGPAQ9UK23 515 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 PCDHB3Q9Y5E6 796 aa8.06□□□□□ -1.12
ZNF540-206ENST00000589117 A0A0A6YYK5 440 aaPredicted RBP8.05□□□□□ -1.12
ZNF540-206ENST00000589117 GOLGA8KD6RF30 607 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 IPO5O00410 1097 aaKnown RBP8.05□□□□□ -1.12
ZNF540-206ENST00000589117 OPLAHO14841 1288 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 CHMP2AO43633 222 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 LZTS3O60299 673 aaPredicted RBP8.05□□□□□ -1.12
ZNF540-206ENST00000589117 PHACTR2O75167 634 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 KRT13P13646 458 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 KLRC1P26715 233 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 CHRNA5P30532 468 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 ZNF720Q7Z2F6 126 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 TTLL6Q8N841 843 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 SLC17A8Q8NDX2 589 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 AENQ8WTP8 325 aaKnown RBP8.05□□□□□ -1.12
ZNF540-206ENST00000589117 SREK1Q8WXA9 508 aaKnown RBP8.05□□□□□ -1.12
ZNF540-206ENST00000589117 SLC35C1Q96A29 364 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 CCDC43Q96MW1 224 aaKnown RBP8.05□□□□□ -1.12
ZNF540-206ENST00000589117 IWS1Q96ST2 819 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 P2RX7Q99572 595 aaKnown RBP8.05□□□□□ -1.12
ZNF540-206ENST00000589117 TMEM206Q9H813 350 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 FAM204AQ9H8W3 233 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 MAP3K20Q9NYL2 800 aaKnown RBP8.05□□□□□ -1.12
ZNF540-206ENST00000589117 TCEAL9Q9UHQ7 104 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 DCTN4Q9UJW0 460 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 ASTN1O14525 1302 aa8.05□□□□□ -1.12
ZNF540-206ENST00000589117 RSPH10B2B2RC85 870 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 EML1O00423 815 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 CLIC2O15247 247 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 TLL1O43897 1013 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 N4BP1O75113 896 aaKnown RBP8.04□□□□□ -1.12
ZNF540-206ENST00000589117 P4HBP07237 508 aaKnown RBP8.04□□□□□ -1.12
ZNF540-206ENST00000589117 RSPH10BP0C881 870 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 BCRP11274 1271 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 VAMP1P23763 118 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 GUCY2CP25092 1073 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 ECE1P42892 770 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 ZNF131P52739 623 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 NPEPPSP55786 919 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 NIPA1Q7RTP0 329 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 LDHDQ86WU2 507 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 EIF1ADQ8N9N8 165 aaKnown RBP8.04□□□□□ -1.12
ZNF540-206ENST00000589117 PRPF38AQ8NAV1 312 aaKnown RBP8.04□□□□□ -1.12
ZNF540-206ENST00000589117 FAM76AQ8TAV0 307 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 CAVIN3Q969G5 261 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 PSMD1Q99460 953 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 TIPINQ9BVW5 301 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 STK33Q9BYT3 514 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 UNC93B1Q9H1C4 597 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 DEFB129Q9H1M3 183 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 VEZTQ9HBM0 779 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 STK32BQ9NY57 414 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 SALL4Q9UJQ4 1053 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 CTDP1Q9Y5B0 961 aaPredicted RBP8.04□□□□□ -1.12
ZNF540-206ENST00000589117 CLRN2A0PK11 232 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 GOLGA6CA6NDK9 693 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 NCK2O43639 380 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 EXOC3O60645 756 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 FTCDO95954 541 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 GOLGA6DP0CG33 693 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 MAPTP10636 758 aaKnown RBP8.04□□□□□ -1.12
ZNF540-206ENST00000589117 ACTN1P12814 892 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 HOXD13P35453 343 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms