RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 EPCAMP16422 314 aa20.7■□□□□ 0.9
CCDC43-204ENST00000588687 POLGP54098 1239 aaPredicted RBP20.7■□□□□ 0.9
CCDC43-204ENST00000588687 NLRP5P59047 1200 aa20.7■□□□□ 0.9
CCDC43-204ENST00000588687 CDC42EP1Q00587 391 aa20.7■□□□□ 0.9
CCDC43-204ENST00000588687 MTMR3Q13615 1198 aa20.7■□□□□ 0.9
CCDC43-204ENST00000588687 CES5AQ6NT32 575 aa20.7■□□□□ 0.9
CCDC43-204ENST00000588687 KANK3Q6NY19 840 aa20.7■□□□□ 0.9
CCDC43-204ENST00000588687 DDX53Q86TM3 631 aaKnown RBP20.7■□□□□ 0.9
CCDC43-204ENST00000588687 KSR1Q8IVT5 923 aa20.7■□□□□ 0.9
CCDC43-204ENST00000588687 C12orf76Q8N812 135 aaPredicted RBP20.7■□□□□ 0.9
CCDC43-204ENST00000588687 IFT122Q9HBG6 1241 aa20.7■□□□□ 0.9
CCDC43-204ENST00000588687 DNAJB4Q9UDY4 337 aa20.7■□□□□ 0.9
CCDC43-204ENST00000588687 VAV3Q9UKW4 847 aa20.7■□□□□ 0.9
CCDC43-204ENST00000588687 OFD1O75665 1012 aa20.69■□□□□ 0.9
CCDC43-204ENST00000588687 CXCL14O95715 111 aa20.69■□□□□ 0.9
CCDC43-204ENST00000588687 GALTP07902 379 aa20.69■□□□□ 0.9
CCDC43-204ENST00000588687 LONRF3Q496Y0 759 aa20.69■□□□□ 0.9
CCDC43-204ENST00000588687 NOMO2Q5JPE7 1267 aa20.69■□□□□ 0.9
CCDC43-204ENST00000588687 RARS2Q5T160 578 aaKnown RBP20.69■□□□□ 0.9
CCDC43-204ENST00000588687 PLA2G4FQ68DD2 849 aa20.69■□□□□ 0.9
CCDC43-204ENST00000588687 TWF2Q6IBS0 349 aaKnown RBP20.69■□□□□ 0.9
CCDC43-204ENST00000588687 UBALD2Q8IYN6 164 aa20.69■□□□□ 0.9
CCDC43-204ENST00000588687 AIFM3Q96NN9 605 aa20.69■□□□□ 0.9
CCDC43-204ENST00000588687 C22orf23Q9BZE7 217 aa20.69■□□□□ 0.9
CCDC43-204ENST00000588687 AGPAT5Q9NUQ2 364 aa20.69■□□□□ 0.9
CCDC43-204ENST00000588687 DZANK1Q9NVP4 752 aa20.69■□□□□ 0.9
CCDC43-204ENST00000588687 SUCLA2Q9P2R7 463 aaPredicted RBP20.69■□□□□ 0.9
CCDC43-204ENST00000588687 WRAP73Q9P2S5 460 aaPredicted RBP20.69■□□□□ 0.9
CCDC43-204ENST00000588687 SPTBN4Q9H254 2564 aa20.68■□□□□ 0.9
CCDC43-204ENST00000588687 EML1O00423 815 aa20.68■□□□□ 0.9
CCDC43-204ENST00000588687 MTHFRP42898 656 aa20.68■□□□□ 0.9
CCDC43-204ENST00000588687 SLC11A1P49279 550 aa20.68■□□□□ 0.9
CCDC43-204ENST00000588687 PTPN14Q15678 1187 aa20.68■□□□□ 0.9
CCDC43-204ENST00000588687 GLB1LQ6UWU2 654 aa20.68■□□□□ 0.9
CCDC43-204ENST00000588687 ZBTB33Q86T24 672 aa20.68■□□□□ 0.9
CCDC43-204ENST00000588687 RHPN2Q8IUC4 686 aa20.68■□□□□ 0.9
CCDC43-204ENST00000588687 ZDHHC14Q8IZN3 488 aa20.68■□□□□ 0.9
CCDC43-204ENST00000588687 BLIDQ8IZY5 108 aa20.68■□□□□ 0.9
CCDC43-204ENST00000588687 ZSWIM6Q9HCJ5 1215 aa20.68■□□□□ 0.9
CCDC43-204ENST00000588687 DEXIO95424 95 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 ASGR2P07307 311 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 SKIP12755 728 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 PSMA5P28066 241 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 RAB27AP51159 221 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 AFF1P51825 1210 aaKnown RBP20.67■□□□□ 0.9
CCDC43-204ENST00000588687 NUBP1P53384 320 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 PPP2R5CQ13362 524 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 AGMOQ6ZNB7 445 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 RUFY3Q7L099 469 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 ZNF280BQ86YH2 543 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 TMEM105Q8N8V8 129 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 ZNF579Q8NAF0 562 aaKnown RBP20.67■□□□□ 0.9
CCDC43-204ENST00000588687 NLRP4Q96MN2 994 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 KCNMB3Q9NPA1 279 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 USTQ9Y2C2 406 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 INPP5FQ9Y2H2 1132 aa20.67■□□□□ 0.9
CCDC43-204ENST00000588687 CARNS1A5YM72 827 aa20.66■□□□□ 0.9
CCDC43-204ENST00000588687 GALR2O43603 387 aaPredicted RBP20.66■□□□□ 0.9
CCDC43-204ENST00000588687 ST18O60284 1047 aa20.66■□□□□ 0.9
CCDC43-204ENST00000588687 DNM2P50570 870 aa20.66■□□□□ 0.9
CCDC43-204ENST00000588687 PSMC5P62195 406 aa20.66■□□□□ 0.9
CCDC43-204ENST00000588687 UBXN11Q5T124 520 aa20.66■□□□□ 0.9
CCDC43-204ENST00000588687 CATSPER4Q7RTX7 472 aa20.66■□□□□ 0.9
CCDC43-204ENST00000588687 TRIM22Q8IYM9 498 aa20.66■□□□□ 0.9
CCDC43-204ENST00000588687 FAM177A1Q8N128 213 aaPredicted RBP20.66■□□□□ 0.9
CCDC43-204ENST00000588687 TDRD5Q8NAT2 981 aaKnown RBP20.66■□□□□ 0.9
CCDC43-204ENST00000588687 INO80BQ9C086 356 aaPredicted RBP20.66■□□□□ 0.9
CCDC43-204ENST00000588687 MINDY3Q9H8M7 445 aa20.66■□□□□ 0.9
CCDC43-204ENST00000588687 CYP26B1Q9NR63 512 aa20.66■□□□□ 0.9
CCDC43-204ENST00000588687 DDX25Q9UHL0 483 aaKnown RBP20.66■□□□□ 0.9
CCDC43-204ENST00000588687 RIF1Q5UIP0 2472 aaKnown RBP20.65■□□□□ 0.9
CCDC43-204ENST00000588687 DDX11L8A8MPP1 907 aa20.65■□□□□ 0.9
CCDC43-204ENST00000588687 LILRB3O75022 631 aa20.65■□□□□ 0.9
CCDC43-204ENST00000588687 DDHD2O94830 711 aa20.65■□□□□ 0.9
CCDC43-204ENST00000588687 HOXA11P31270 313 aaPredicted RBP20.65■□□□□ 0.9
CCDC43-204ENST00000588687 CA8P35219 290 aa20.65■□□□□ 0.9
CCDC43-204ENST00000588687 NPEPPSP55786 919 aa20.65■□□□□ 0.9
CCDC43-204ENST00000588687 SSRP1Q08945 709 aaKnown RBP20.65■□□□□ 0.9
CCDC43-204ENST00000588687 GIT2Q14161 759 aa20.65■□□□□ 0.9
CCDC43-204ENST00000588687 INF2Q27J81 1249 aa20.65■□□□□ 0.9
CCDC43-204ENST00000588687 MRPL10Q7Z7H8 261 aaKnown RBP20.65■□□□□ 0.9
CCDC43-204ENST00000588687 DHX33Q9H6R0 707 aaKnown RBP20.65■□□□□ 0.9
CCDC43-204ENST00000588687 PCDHB2Q9Y5E7 798 aa20.65■□□□□ 0.9
CCDC43-204ENST00000588687 COL4A3BPQ9Y5P4 624 aa20.65■□□□□ 0.9
CCDC43-204ENST00000588687 PROB1E7EW31 1015 aa20.64■□□□□ 0.89
CCDC43-204ENST00000588687 H0Y858 1186 aa20.64■□□□□ 0.89
CCDC43-204ENST00000588687 GFRA3O60609 400 aa20.64■□□□□ 0.89
CCDC43-204ENST00000588687 CLCN4P51793 760 aa20.64■□□□□ 0.89
CCDC43-204ENST00000588687 NONOQ15233 471 aaKnown RBP eCLIP20.64■□□□□ 0.89
CCDC43-204ENST00000588687 GALNT17Q6IS24 598 aa20.64■□□□□ 0.89
CCDC43-204ENST00000588687 ZNF274Q96GC6 653 aaPredicted RBP20.64■□□□□ 0.89
CCDC43-204ENST00000588687 FRYLO94915 3013 aa20.64■□□□□ 0.89
CCDC43-204ENST00000588687 GVINP1Q7Z2Y8 2422 aa20.63■□□□□ 0.89
CCDC43-204ENST00000588687 REC8O95072 547 aa20.63■□□□□ 0.89
CCDC43-204ENST00000588687 EFEMP2O95967 443 aa20.63■□□□□ 0.89
CCDC43-204ENST00000588687 QARSP47897 775 aaKnown RBP20.63■□□□□ 0.89
CCDC43-204ENST00000588687 SPIRE1Q08AE8 756 aa20.63■□□□□ 0.89
CCDC43-204ENST00000588687 BMS1Q14692 1282 aaKnown RBP20.63■□□□□ 0.89
CCDC43-204ENST00000588687 TMC5Q6UXY8 1006 aa20.63■□□□□ 0.89
CCDC43-204ENST00000588687 KRT25Q7Z3Z0 450 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms