RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 MTSS1O43312 755 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 ABHD16AO95870 558 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 SLC9A1P19634 815 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 FLT3P36888 993 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 PTPAQ15257 358 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 FNDC3BQ53EP0 1204 aaKnown RBP4.88□□□□□ -1.63
VPS4B-203ENST00000588323 DCAF17Q5H9S7 520 aaPredicted RBP4.88□□□□□ -1.63
VPS4B-203ENST00000588323 PIK3R6Q5UE93 754 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 MBNL2Q5VZF2 373 aaKnown RBP4.88□□□□□ -1.63
VPS4B-203ENST00000588323 NAIF1Q69YI7 327 aaPredicted RBP4.88□□□□□ -1.63
VPS4B-203ENST00000588323 KCNV1Q6PIU1 500 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 RHOUQ7L0Q8 258 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 APBB1IPQ7Z5R6 666 aaPredicted RBP4.88□□□□□ -1.63
VPS4B-203ENST00000588323 VRK3Q8IV63 474 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 CLUHP3Q96NS8 147 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 MTG2Q9H4K7 406 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 B4GALT6Q9UBX8 382 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 SORCS3Q9UPU3 1222 aa4.88□□□□□ -1.63
VPS4B-203ENST00000588323 A0A0A6YYJ9 748 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 DNAJC8O75937 253 aaPredicted RBP4.87□□□□□ -1.63
VPS4B-203ENST00000588323 STC2O76061 302 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 RECQL4O94761 1208 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 FSBPO95073 299 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 NUDT3O95989 172 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 ITGB1P05556 798 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 HK1P19367 917 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 ZNF460Q14592 562 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 UBE2R2Q712K3 238 aaPredicted RBP4.87□□□□□ -1.63
VPS4B-203ENST00000588323 KANSL1Q7Z3B3 1105 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 LILRB2Q8N423 598 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 CPT1CQ8TCG5 803 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 HIST1H2AHQ96KK5 128 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 FAM193BQ96PV7 902 aaPredicted RBP4.87□□□□□ -1.63
VPS4B-203ENST00000588323 ELF4Q99607 663 aaPredicted RBP4.87□□□□□ -1.63
VPS4B-203ENST00000588323 HIST1H2AJQ99878 128 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 MLST8Q9BVC4 326 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 OSBPL6Q9BZF3 934 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 EPC1Q9H2F5 836 aa4.87□□□□□ -1.63
VPS4B-203ENST00000588323 GRXCR1A8MXD5 290 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 CBX4O00257 560 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 NRP1O14786 923 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 OPHN1O60890 802 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 PRPF6O94906 941 aaKnown RBP4.86□□□□□ -1.63
VPS4B-203ENST00000588323 NR4A1P22736 598 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 PROZP22891 400 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 ADRA1BP35368 520 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 FAM214AQ32MH5 1076 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 TIGD2Q4W5G0 525 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 KIAA1841Q6NSI8 718 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 ESRP1Q6NXG1 681 aaKnown RBP4.86□□□□□ -1.63
VPS4B-203ENST00000588323 LRRC55Q6ZSA7 311 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 ZZZ3Q8IYH5 903 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 GPR150Q8NGU9 434 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 NOL10Q9BSC4 688 aaKnown RBP4.86□□□□□ -1.63
VPS4B-203ENST00000588323 MYL10Q9BUA6 226 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 POFUT1Q9H488 388 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 PACSIN3Q9UKS6 424 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 SPO11Q9Y5K1 396 aa4.86□□□□□ -1.63
VPS4B-203ENST00000588323 TRIM24O15164 1050 aa4.85□□□□□ -1.63
VPS4B-203ENST00000588323 SCAF4O95104 1147 aaKnown RBP4.85□□□□□ -1.63
VPS4B-203ENST00000588323 LMNAP02545 664 aaKnown RBP4.85□□□□□ -1.63
VPS4B-203ENST00000588323 JMJD7P0C870 316 aa4.85□□□□□ -1.63
VPS4B-203ENST00000588323 GYPEP15421 78 aa4.85□□□□□ -1.63
VPS4B-203ENST00000588323 UNQ6494/PRO21346Q6UXR6 183 aa4.85□□□□□ -1.63
VPS4B-203ENST00000588323 RTF1Q92541 710 aaKnown RBP4.85□□□□□ -1.63
VPS4B-203ENST00000588323 CPPED1Q9BRF8 314 aaPredicted RBP4.85□□□□□ -1.63
VPS4B-203ENST00000588323 TOMM22Q9NS69 142 aa4.85□□□□□ -1.63
VPS4B-203ENST00000588323 ING3Q9NXR8 418 aa4.85□□□□□ -1.63
VPS4B-203ENST00000588323 EIF2B4Q9UI10 523 aaKnown RBP4.85□□□□□ -1.63
VPS4B-203ENST00000588323 A0A0A6YYK5 440 aaPredicted RBP4.84□□□□□ -1.63
VPS4B-203ENST00000588323 HOXA3O43365 443 aaPredicted RBP4.84□□□□□ -1.63
VPS4B-203ENST00000588323 B3GALT2O43825 422 aa4.84□□□□□ -1.63
VPS4B-203ENST00000588323 ALDH1A2O94788 518 aa4.84□□□□□ -1.63
VPS4B-203ENST00000588323 CFAP100Q494V2 611 aa4.84□□□□□ -1.63
VPS4B-203ENST00000588323 PLEKHG4Q58EX7 1191 aa4.84□□□□□ -1.63
VPS4B-203ENST00000588323 CDCA2Q69YH5 1023 aaPredicted RBP4.84□□□□□ -1.63
VPS4B-203ENST00000588323 UNC5BQ8IZJ1 945 aa4.84□□□□□ -1.63
VPS4B-203ENST00000588323 GLB1L3Q8NCI6 653 aaPredicted RBP4.84□□□□□ -1.63
VPS4B-203ENST00000588323 OR5M3Q8NGP4 307 aa4.84□□□□□ -1.63
VPS4B-203ENST00000588323 SOX7Q9BT81 388 aa4.84□□□□□ -1.63
VPS4B-203ENST00000588323 RIOX1Q9H6W3 641 aa4.84□□□□□ -1.63
VPS4B-203ENST00000588323 ZNHIT2Q9UHR6 403 aa4.84□□□□□ -1.63
VPS4B-203ENST00000588323 ZKSCAN5Q9Y2L8 839 aa4.84□□□□□ -1.63
VPS4B-203ENST00000588323 HS3ST4Q9Y661 456 aa4.84□□□□□ -1.63
VPS4B-203ENST00000588323 PCDH8O95206 1070 aa4.83□□□□□ -1.64
VPS4B-203ENST00000588323 GAAP10253 952 aa4.83□□□□□ -1.64
VPS4B-203ENST00000588323 LAG3P18627 525 aa4.83□□□□□ -1.64
VPS4B-203ENST00000588323 METTL24Q5JXM2 366 aa4.83□□□□□ -1.64
VPS4B-203ENST00000588323 FAM83AQ86UY5 434 aa4.83□□□□□ -1.64
VPS4B-203ENST00000588323 CXorf67Q86X51 503 aaPredicted RBP4.83□□□□□ -1.64
VPS4B-203ENST00000588323 VOPP1Q96AW1 172 aa4.83□□□□□ -1.64
VPS4B-203ENST00000588323 PDCD2LQ9BRP1 358 aa4.83□□□□□ -1.64
VPS4B-203ENST00000588323 OXSMQ9NWU1 459 aa4.83□□□□□ -1.64
VPS4B-203ENST00000588323 HDAC5Q9UQL6 1122 aa4.83□□□□□ -1.64
VPS4B-203ENST00000588323 MYPNQ86TC9 1320 aa4.82□□□□□ -1.64
VPS4B-203ENST00000588323 GRID2IPA4D2P6 1211 aa4.82□□□□□ -1.64
VPS4B-203ENST00000588323 DNAJC6O75061 913 aa4.82□□□□□ -1.64
VPS4B-203ENST00000588323 FBLP22087 321 aaKnown RBP4.82□□□□□ -1.64
VPS4B-203ENST00000588323 CD40P25942 277 aa4.82□□□□□ -1.64
VPS4B-203ENST00000588323 SF3A1Q15459 793 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms