RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 STK4Q13043 487 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 CAPSQ13938 189 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 NFIL3Q16649 462 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 MAPK6Q16659 721 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 FAM187BQ17R55 369 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 KNOP1Q1ED39 458 aaKnown RBP11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 EDRF1Q3B7T1 1238 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 GDF6Q6KF10 455 aaPredicted RBP11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 ZPBP2Q6X784 338 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 MAEAQ7L5Y9 396 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 MAP4K3Q8IVH8 894 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 LRRC71Q8N4P6 559 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 RNF149Q8NC42 400 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 KIAA0895Q8NCT3 520 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 FAM200AQ8TCP9 573 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 NOC3LQ8WTT2 800 aaKnown RBP11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 TRAPPC12Q8WVT3 735 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 SCLT1Q96NL6 688 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 FIZ1Q96SL8 496 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 GZF1Q9H116 711 aaPredicted RBP11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 C11orf49Q9H6J7 331 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 SLC39A2Q9NP94 309 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 GPRC5CQ9NQ84 441 aa11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 TYW1Q9NV66 732 aaKnown RBP11.38□□□□□ -0.59
CLPTM1-207ENST00000587537 KIAA0100Q14667 2235 aaKnown RBP11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 DENND3A2RUS2 1198 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 BECN2A8MW95 431 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 PITPNM1O00562 1244 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 PIGRP01833 764 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 SFPQP23246 707 aaKnown RBP eCLIP11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 PRCPP42785 496 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 ZNF165P49910 485 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 GPC3P51654 580 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 MRPS6P82932 125 aaKnown RBP11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 MKRN4PQ13434 485 aaPredicted RBP11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 KYAT1Q16773 422 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 DPCR1Q3MIW9 517 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 ANO6Q4KMQ2 910 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 SLFN12LQ6IEE8 588 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 CENPPQ6IPU0 288 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 SLC39A5Q6ZMH5 540 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 SYCP3Q8IZU3 236 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 ENOX1Q8TC92 643 aaKnown RBP11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 ASAP3Q8TDY4 903 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 SCFD1Q8WVM8 642 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 NLRP7Q8WX94 980 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 ERCC4Q92889 916 aaPredicted RBP11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 MRPL4Q9BYD3 311 aaKnown RBP11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 SENP6Q9GZR1 1112 aaPredicted RBP11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 GBP3Q9H0R5 595 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 TBX20Q9UMR3 447 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 TRAF3IP3Q9Y228 551 aa11.37□□□□□ -0.59
CLPTM1-207ENST00000587537 SFI1A8K8P3 1242 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 PPP1R3GB7ZBB8 358 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 ACKR2O00590 384 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 SLC16A4O15374 487 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 GNA14O95837 355 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 MYCP01106 439 aaPredicted RBP11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 CD4P01730 458 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 BMP6P22004 513 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 EIF4BP23588 611 aaKnown RBP11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 NLRP11P59045 1033 aaKnown RBP11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 POU5F1Q01860 360 aaKnown RBP11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 MYL5Q02045 173 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 FAM26DQ5JW98 314 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 SLC9A9Q8IVB4 645 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 FAM114A1Q8IWE2 563 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 C12orf56Q8IXR9 622 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 FAM126BQ8IXS8 530 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 DNAJB3Q8WWF6 145 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 P2RX5Q93086 422 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 CCDC51Q96ER9 411 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 NLRP4Q96MN2 994 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 CELF4Q9BZC1 486 aaKnown RBP11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 FAM49AQ9H0Q0 323 aaPredicted RBP11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 ADAMTS10Q9H324 1103 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 FZD8Q9H461 694 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 KIAA1586Q9HCI6 787 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 GDAQ9Y2T3 454 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 TRPV2Q9Y5S1 764 aa11.36□□□□□ -0.59
CLPTM1-207ENST00000587537 GOLGA6L19H0YKK7 550 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 HNRNPDLO14979 420 aaKnown RBP11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 B4GALT4O60513 344 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 GPR32O75388 356 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 ERLIN2O94905 339 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 VTNP04004 478 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 PRKCBP05771 671 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 SRGAP2CP0DJJ0 459 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 DARSP14868 501 aaKnown RBP11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 GARTP22102 1010 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 NMT1P30419 496 aaKnown RBP11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 FKBP3Q00688 224 aaKnown RBP11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 ENPEPQ07075 957 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 SPAG1Q07617 926 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 DRP2Q13474 957 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 TPD52L1Q16890 204 aaPredicted RBP11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 SPATA1Q5VX52 437 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 RUFY4Q6ZNE9 571 aa11.35□□□□□ -0.59
CLPTM1-207ENST00000587537 USP37Q86T82 979 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms