RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 HAPLN2Q9GZV7 340 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 MTFR1LQ9H019 292 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 CSRNP2Q9H175 543 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 TOMM22Q9NS69 142 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 POLR3BQ9NW08 1133 aaPredicted RBP6.08□□□□□ -1.44
VMP1-205ENST00000587470 FANCLQ9NW38 375 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 GIT1Q9Y2X7 761 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 ERICH3Q5RHP9 1530 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 CAPN14A8MX76 684 aa6.07□□□□□ -1.44
VMP1-205ENST00000587470 KPNA6O60684 536 aa6.07□□□□□ -1.44
VMP1-205ENST00000587470 PRPF6O94906 941 aaKnown RBP6.07□□□□□ -1.44
VMP1-205ENST00000587470 PTH1RQ03431 593 aa6.07□□□□□ -1.44
VMP1-205ENST00000587470 C21orf62-AS1Q17RA5 79 aa6.07□□□□□ -1.44
VMP1-205ENST00000587470 SPTY2D1Q68D10 685 aaPredicted RBP6.07□□□□□ -1.44
VMP1-205ENST00000587470 CLEC14AQ86T13 490 aa6.07□□□□□ -1.44
VMP1-205ENST00000587470 PASD1Q8IV76 773 aa6.07□□□□□ -1.44
VMP1-205ENST00000587470 ANKRD35Q8N283 1001 aa6.07□□□□□ -1.44
VMP1-205ENST00000587470 RTF1Q92541 710 aaKnown RBP6.07□□□□□ -1.44
VMP1-205ENST00000587470 PLEKHG4BQ96PX9 1271 aa6.07□□□□□ -1.44
VMP1-205ENST00000587470 GPHA2Q96T91 129 aa6.07□□□□□ -1.44
VMP1-205ENST00000587470 MRIQ9BWK5 157 aa6.07□□□□□ -1.44
VMP1-205ENST00000587470 PITHD1Q9GZP4 211 aaPredicted RBP6.07□□□□□ -1.44
VMP1-205ENST00000587470 PCED1AQ9H1Q7 454 aa6.07□□□□□ -1.44
VMP1-205ENST00000587470 ZNF703Q9H7S9 590 aaPredicted RBP6.07□□□□□ -1.44
VMP1-205ENST00000587470 SH3BP1Q9Y3L3 701 aa6.07□□□□□ -1.44
VMP1-205ENST00000587470 CARMIL1Q5VZK9 1371 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 ADAMTS12P58397 1594 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 A0A0A6YYJ9 748 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 APOL3O95236 402 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 ADAM8P78325 824 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 DSG1Q02413 1049 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 LSM12Q3MHD2 195 aaKnown RBP6.06□□□□□ -1.44
VMP1-205ENST00000587470 KIAA1841Q6NSI8 718 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 GAREM2Q75VX8 874 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 NXPE1Q8N323 547 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 EFHBQ8N7U6 833 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 MYL10Q9BUA6 226 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 OSBPL6Q9BZF3 934 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 POFUT1Q9H488 388 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 MTG2Q9H4K7 406 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 H2AFY2Q9P0M6 372 aaPredicted RBP6.06□□□□□ -1.44
VMP1-205ENST00000587470 DNAI1Q9UI46 699 aa6.06□□□□□ -1.44
VMP1-205ENST00000587470 FAM83GA6ND36 823 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 TOX4O94842 621 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 JUNP05412 331 aaKnown RBP6.05□□□□□ -1.44
VMP1-205ENST00000587470 VSIG10L2P0DP72 767 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 CD40P25942 277 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 DGCR2P98153 550 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 LRRC32Q14392 662 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 MAN2A1Q16706 1144 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 TKFCQ3LXA3 575 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 CNNM4Q6P4Q7 775 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 FAM111BQ6SJ93 734 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 UNQ6494/PRO21346Q6UXR6 183 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 AHI1Q8N157 1196 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 MIEF2Q96C03 454 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 TCF25Q9BQ70 676 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 ZMAT4Q9H898 229 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 IL23AQ9NPF7 189 aa6.05□□□□□ -1.44
VMP1-205ENST00000587470 ABCC2Q92887 1545 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 KIAA0586Q9BVV6 1533 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 MAP3K4Q9Y6R4 1608 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 UBE2QL1A1L167 161 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 ZNF891A8MT65 544 aaPredicted RBP6.04□□□□□ -1.44
VMP1-205ENST00000587470 OPHN1O60890 802 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 ZNF202O95125 648 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 C1SP09871 688 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 SMAD3P84022 425 aaKnown RBP6.04□□□□□ -1.44
VMP1-205ENST00000587470 KRT40Q6A162 431 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 TMPRSS6Q8IU80 811 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 NIM1KQ8IY84 436 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 GSPT2Q8IYD1 628 aaKnown RBP6.04□□□□□ -1.44
VMP1-205ENST00000587470 CACTINQ8WUQ7 758 aaKnown RBP6.04□□□□□ -1.44
VMP1-205ENST00000587470 CHTF18Q8WVB6 975 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 HIST1H2AHQ96KK5 128 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 HIST1H2AJQ99878 128 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 NOL10Q9BSC4 688 aaKnown RBP6.04□□□□□ -1.44
VMP1-205ENST00000587470 C14orf93Q9H972 538 aaKnown RBP6.04□□□□□ -1.44
VMP1-205ENST00000587470 PARPBPQ9NWS1 579 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 THG1LQ9NWX6 298 aaKnown RBP6.04□□□□□ -1.44
VMP1-205ENST00000587470 USP36Q9P275 1121 aaKnown RBP6.04□□□□□ -1.44
VMP1-205ENST00000587470 HECAQ9UBI9 543 aaPredicted RBP6.04□□□□□ -1.44
VMP1-205ENST00000587470 RCAN3Q9UKA8 241 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 PTPRGP23470 1445 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 ADAMTSL3P82987 1691 aa6.04□□□□□ -1.44
VMP1-205ENST00000587470 KIF21BO75037 1637 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 OVOL3O00110 214 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 NARSO43776 548 aaKnown RBP6.03□□□□□ -1.44
VMP1-205ENST00000587470 CDC45O75419 566 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 FSBPO95073 299 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 HNRNPLP14866 589 aaKnown RBP eCLIP6.03□□□□□ -1.44
VMP1-205ENST00000587470 MCM7P33993 719 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 KIR2DL3P43628 341 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 SCNN1BP51168 640 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 KPNA1P52294 538 aaPredicted RBP6.03□□□□□ -1.44
VMP1-205ENST00000587470 ABHD18Q0P651 414 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 KLF10Q13118 480 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 CRHR2Q13324 411 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 RRP1BQ14684 758 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms