RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 DUSP28Q4G0W2 176 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 BRDTQ58F21 947 aaPredicted RBP21.68■■□□□ 1.06
TRIM47-204ENST00000587339 INTS8Q75QN2 995 aaKnown RBP21.68■■□□□ 1.06
TRIM47-204ENST00000587339 AFG1LQ8WV93 481 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 HHIPL1Q96JK4 782 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 DESI2Q9BSY9 194 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 CEP72Q9P209 647 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 ZBTB42B2RXF5 422 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 ANKRD63C9JTQ0 380 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 HBP1O60381 514 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 KRT13P13646 458 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 ADSSP30520 456 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 GRM1Q13255 1194 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 CRHR2Q13324 411 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 IQSEC1Q6DN90 963 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 SUGCTQ9HAC7 445 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 PLAGL2Q9UPG8 496 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 NOL4O94818 638 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 LGALS2P05162 132 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 HOXC6P09630 235 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 SMPD1P17405 629 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 TM4SF4P48230 202 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 STRN3Q13033 797 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 PAXIP1Q6ZW49 1069 aaPredicted RBP21.67■■□□□ 1.06
TRIM47-204ENST00000587339 TAS1R3Q7RTX0 852 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 TCP11Q8WWU5 503 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 KCNN1Q92952 543 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 BICD1Q96G01 975 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 JPH2Q9BR39 696 aaPredicted RBP21.67■■□□□ 1.06
TRIM47-204ENST00000587339 GTPBP10A4D1E9 387 aaKnown RBP21.67■■□□□ 1.06
TRIM47-204ENST00000587339 PPFIA4O75335 1185 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 DRP2Q13474 957 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 IER5Q5VY09 327 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 GBP6Q6ZN66 633 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 RRAGAQ7L523 313 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 REXO1L1PQ8IX06 675 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 BAP1Q92560 729 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 RNPEPQ9H4A4 650 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 ADGRG1Q9Y653 693 aa21.67■■□□□ 1.06
TRIM47-204ENST00000587339 GOLGA6L9A6NEM1 432 aa21.66■■□□□ 1.06
TRIM47-204ENST00000587339 LRRC53A6NM62 1247 aa21.66■■□□□ 1.06
TRIM47-204ENST00000587339 K7ERI5 159 aa21.66■■□□□ 1.06
TRIM47-204ENST00000587339 MAPK13O15264 365 aa21.66■■□□□ 1.06
TRIM47-204ENST00000587339 HNRNPH3P31942 346 aaKnown RBP21.66■■□□□ 1.06
TRIM47-204ENST00000587339 POLR2FP61218 127 aaKnown RBP21.66■■□□□ 1.06
TRIM47-204ENST00000587339 PRPF31Q8WWY3 499 aaKnown RBP21.66■■□□□ 1.06
TRIM47-204ENST00000587339 NLRC4Q9NPP4 1024 aa21.66■■□□□ 1.06
TRIM47-204ENST00000587339 PLCB1Q9NQ66 1216 aa21.66■■□□□ 1.06
TRIM47-204ENST00000587339 IGKV6-21A0A0C4DH24 114 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 TRIM49P0CI25 452 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 TRIM49CP0CI26 452 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 SLC9A1P19634 815 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 PON1P27169 355 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 FMO5P49326 533 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 CDK17Q00537 523 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 CAPSQ13938 189 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 SLC39A4Q6P5W5 647 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 PSPC1Q8WXF1 523 aaKnown RBP21.65■■□□□ 1.06
TRIM47-204ENST00000587339 POMGNT1Q8WZA1 660 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 ZIC5Q96T25 663 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 GCNT4Q9P109 453 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 KIF2AO00139 706 aaPredicted RBP21.65■■□□□ 1.06
TRIM47-204ENST00000587339 TNPO2O14787 897 aaKnown RBP21.65■■□□□ 1.06
TRIM47-204ENST00000587339 RGS2P41220 211 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 LIG4P49917 911 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 VAMP7P51809 220 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 APBA1Q02410 837 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 TNFAIP2Q03169 654 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 IRF5Q13568 498 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 MXD4Q14582 209 aaPredicted RBP21.65■■□□□ 1.06
TRIM47-204ENST00000587339 SNRNP35Q16560 246 aaKnown RBP21.65■■□□□ 1.06
TRIM47-204ENST00000587339 LRRC71Q8N4P6 559 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 ZSWIM2Q8NEG5 633 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 OR6J1Q8NGC5 347 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 TRAPPC12Q8WVT3 735 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 SOCS4Q8WXH5 440 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 USP6NLQ92738 828 aa21.65■■□□□ 1.06
TRIM47-204ENST00000587339 NUCKS1Q9H1E3 243 aaKnown RBP21.65■■□□□ 1.06
TRIM47-204ENST00000587339 EPN1Q9Y6I3 576 aaPredicted RBP21.65■■□□□ 1.06
TRIM47-204ENST00000587339 GOLGA8IPA6NC78 632 aa21.64■■□□□ 1.05
TRIM47-204ENST00000587339 GOLGA8JA6NMD2 632 aa21.64■■□□□ 1.05
TRIM47-204ENST00000587339 CA12O43570 354 aa21.64■■□□□ 1.05
TRIM47-204ENST00000587339 NDUFA10O95299 355 aa21.64■■□□□ 1.05
TRIM47-204ENST00000587339 CYP2B6P20813 491 aa21.64■■□□□ 1.05
TRIM47-204ENST00000587339 SAAL1Q96ER3 474 aa21.64■■□□□ 1.05
TRIM47-204ENST00000587339 C16orf70Q9BSU1 422 aa21.64■■□□□ 1.05
TRIM47-204ENST00000587339 GANQ9H2C0 597 aa21.64■■□□□ 1.05
TRIM47-204ENST00000587339 FLRT1Q9NZU1 646 aa21.64■■□□□ 1.05
TRIM47-204ENST00000587339 ZNF215Q9UL58 517 aaPredicted RBP21.64■■□□□ 1.05
TRIM47-204ENST00000587339 R3HCC1Q9Y3T6 440 aaKnown RBP21.64■■□□□ 1.05
TRIM47-204ENST00000587339 ADCY3O60266 1144 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 ZNF286BP0CG31 522 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 ACTN1P12814 892 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 GARTP22102 1010 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 MKRN4PQ13434 485 aaPredicted RBP21.63■■□□□ 1.05
TRIM47-204ENST00000587339 ZNF484Q5JVG2 852 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 PRAMEF19Q5SWL8 479 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 CYP4F22Q6NT55 531 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 PDXDC1Q6P996 788 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 TMEM134Q9H6X4 195 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms