RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 LARGE1O95461 756 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 QARSP47897 775 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 AFF1P51825 1210 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 ZXDAP98168 799 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 CYP4A11Q02928 519 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 NR5A1Q13285 461 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 SMC1AQ14683 1233 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 NCAPH2Q6IBW4 605 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 TMEM184AQ6ZMB5 413 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 TRIM67Q6ZTA4 783 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 ZNF410Q86VK4 478 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 ZNF710Q8N1W2 664 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 NECAB1Q8N987 351 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 CEP170P1Q96L14 293 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 LXNQ9BS40 222 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 TSHZ2Q9NRE2 1034 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 TBC1D13Q9NVG8 400 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 COL4A3BPQ9Y5P4 624 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 PFKFB2O60825 505 aa17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 CLASP2O75122 1294 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 SRGAP2CP0DJJ0 459 aa17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 ALDH7A1P49419 539 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 POLGP54098 1239 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 AK2P54819 239 aa17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 NHLH1Q02575 133 aa17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 VPS52Q8N1B4 723 aa17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 C12orf76Q8N812 135 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 MRPL43Q8N983 215 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 TMEM169Q96HH4 297 aa17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 DYDC2Q96IM9 177 aa17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 VN1R3Q9BXE9 311 aa17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 MRPL9Q9BYD2 267 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 NRDE2Q9H7Z3 1164 aa17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 CHST12Q9NRB3 414 aa17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 TDRD15B5MCY1 1934 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 DENND4AQ7Z401 1863 aa17.01■□□□□ 0.31
PRKCSH-204ENST00000587290 WNT7AO00755 349 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 OFD1O75665 1012 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 CDKL5O76039 1030 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 CXCL14O95715 111 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 SRGAP2BP0DMP2 458 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 SLC11A1P49279 550 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 PLXNA3P51805 1871 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 SPIRE1Q08AE8 756 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 CTTNQ14247 550 aaKnown RBP17■□□□□ 0.31
PRKCSH-204ENST00000587290 NOMO2Q5JPE7 1267 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 IER5LQ5T953 404 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 PPP4R3AQ6IN85 833 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 GLB1LQ6UWU2 654 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 ZNF280BQ86YH2 543 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 PRPF31Q8WWY3 499 aaKnown RBP17■□□□□ 0.31
PRKCSH-204ENST00000587290 PBXIP1Q96AQ6 731 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 FAM20AQ96MK3 541 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 ZBP1Q9H171 429 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 POMKQ9H5K3 350 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 DHX33Q9H6R0 707 aaKnown RBP17■□□□□ 0.31
PRKCSH-204ENST00000587290 AGPAT5Q9NUQ2 364 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 ORC3Q9UBD5 711 aaPredicted RBP17■□□□□ 0.31
PRKCSH-204ENST00000587290 PCDHB2Q9Y5E7 798 aa17■□□□□ 0.31
PRKCSH-204ENST00000587290 FSD2A1L4K1 749 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 MARCH6O60337 910 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 P4HBP07237 508 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 GALTP07902 379 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 FDPSP14324 419 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 EPCAMP16422 314 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 YWHABP31946 246 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 RNASELQ05823 741 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 LAMTOR4Q0VGL1 99 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 EMC2Q15006 297 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 RARS2Q5T160 578 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 AGMOQ6ZNB7 445 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 SLC7A3Q8WY07 619 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 CASP10Q92851 521 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 IGSF21Q96ID5 467 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 MFSD14AQ96MC6 490 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 PHOX2BQ99453 314 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 TRAIPQ9BWF2 469 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 SMOC2Q9H3U7 446 aa16.99■□□□□ 0.31
PRKCSH-204ENST00000587290 DDHD2O94830 711 aa16.98■□□□□ 0.31
PRKCSH-204ENST00000587290 SSBP05455 408 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRKCSH-204ENST00000587290 GCFC2P16383 781 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-204ENST00000587290 CDC42EP1Q00587 391 aa16.98■□□□□ 0.31
PRKCSH-204ENST00000587290 XKR9Q5GH70 373 aa16.98■□□□□ 0.31
PRKCSH-204ENST00000587290 UBXN11Q5T124 520 aa16.98■□□□□ 0.31
PRKCSH-204ENST00000587290 FAM177A1Q8N128 213 aaPredicted RBP16.98■□□□□ 0.31
PRKCSH-204ENST00000587290 RNF149Q8NC42 400 aa16.98■□□□□ 0.31
PRKCSH-204ENST00000587290 PRSS33Q8NF86 280 aa16.98■□□□□ 0.31
PRKCSH-204ENST00000587290 PSPC1Q8WXF1 523 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-204ENST00000587290 INO80BQ9C086 356 aaPredicted RBP16.98■□□□□ 0.31
PRKCSH-204ENST00000587290 A0A087WWV3 80 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 C2CD4DB7Z1M9 353 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 JAK2O60674 1132 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 PDGFBP01127 241 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 HOXB8P17481 243 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 XBP1P17861 261 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 HOXA11P31270 313 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 MRE11P49959 708 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 VCPP55072 806 aaKnown RBP16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 EPHA7Q15375 998 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms