RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 SARSP49591 514 aaKnown RBP8.76□□□□□ -1.01
VMP1-204ENST00000587259 STAT5BP51692 787 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 NLRP5P59047 1200 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 LSM11P83369 360 aaKnown RBP eCLIP8.76□□□□□ -1.01
VMP1-204ENST00000587259 ORC2Q13416 577 aaPredicted RBP8.76□□□□□ -1.01
VMP1-204ENST00000587259 PKN1Q16512 942 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 KIZQ2M2Z5 673 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 XRRA1Q6P2D8 792 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 LRRC55Q6ZSA7 311 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 CCDC60Q8IWA6 550 aaPredicted RBP8.76□□□□□ -1.01
VMP1-204ENST00000587259 THNSL1Q8IYQ7 743 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 FBXL6Q8N531 539 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 COLGALT1Q8NBJ5 622 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 GIMAP8Q8ND71 665 aaPredicted RBP8.76□□□□□ -1.01
VMP1-204ENST00000587259 CHAMP1Q96JM3 812 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 AIFM3Q96NN9 605 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 OSMRQ99650 979 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 MXRA8Q9BRK3 442 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 PHF7Q9BWX1 381 aaPredicted RBP8.76□□□□□ -1.01
VMP1-204ENST00000587259 CLSTN2Q9H4D0 955 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 AZI2Q9H6S1 392 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 CWH43Q9H720 699 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 AGO4Q9HCK5 861 aaKnown RBP8.76□□□□□ -1.01
VMP1-204ENST00000587259 TLR9Q9NR96 1032 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 BARHL2Q9NY43 387 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 DACT1Q9NYF0 836 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 ST3GAL5Q9UNP4 418 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 PCDHB7Q9Y5E2 793 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 PCDHA2Q9Y5H9 948 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 KMT2EQ8IZD2 1858 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 DENND3A2RUS2 1198 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 RRN3P2A6NIE6 340 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 ZBTB42B2RXF5 422 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 BTBD18B2RXH4 712 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 LAD1O00515 517 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 BACH1O14867 736 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 RPS6KA5O75582 802 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 STAG3L1P0CL83 205 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 FGFR4P22455 802 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 CMA1P23946 247 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 TECP42680 631 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 CEBPZQ03701 1054 aaKnown RBP8.75□□□□□ -1.01
VMP1-204ENST00000587259 CBX2Q14781 532 aaPredicted RBP8.75□□□□□ -1.01
VMP1-204ENST00000587259 ZRSR1Q15695 479 aaKnown RBP8.75□□□□□ -1.01
VMP1-204ENST00000587259 DUSP6Q16828 381 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 UVSSAQ2YD98 709 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 MCTP2Q6DN12 878 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 SYCE2Q6PIF2 218 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 SASS6Q6UVJ0 657 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 RBM43Q6ZSC3 357 aaKnown RBP8.75□□□□□ -1.01
VMP1-204ENST00000587259 FAM228AQ86W67 206 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 SUGP1Q8IWZ8 645 aaKnown RBP8.75□□□□□ -1.01
VMP1-204ENST00000587259 KIAA0319LQ8IZA0 1049 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 KRI1Q8N9T8 703 aaKnown RBP8.75□□□□□ -1.01
VMP1-204ENST00000587259 FSIP1Q8NA03 581 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 ATP8B4Q8TF62 1192 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 SUSD6Q92537 303 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 CDHR1Q96JP9 859 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 SNX27Q96L92 541 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 TIGD1Q96MW7 591 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 FTHL17Q9BXU8 183 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 S1PR5Q9H228 398 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 KCNH6Q9H252 994 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 C6orf50Q9HD87 102 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 RNF19AQ9NV58 838 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 FAM13BQ9NYF5 915 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 VPS54Q9P1Q0 977 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 PCDHA4Q9UN74 947 aa8.75□□□□□ -1.01
VMP1-204ENST00000587259 FNDC1Q4ZHG4 1894 aaPredicted RBP8.74□□□□□ -1.01
VMP1-204ENST00000587259 FAM237AA0A1B0GTK4 181 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 SMIM35A0A1B0GVV1 85 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 C9IYK1 514 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 FSCN2O14926 492 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 GFRA3O60609 400 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 AVPR2P30518 371 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 CLCN3P51790 818 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 PTPN5P54829 565 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 NAPAP54920 295 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 SIGLEC14Q08ET2 396 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 CCDC173Q0VFZ6 552 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 LONRF3Q496Y0 759 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 NAALADL2Q58DX5 795 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 SWSAP1Q6NVH7 229 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 BMP8AQ7Z5Y6 402 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 ELOA2Q8IYF1 753 aaPredicted RBP8.74□□□□□ -1.01
VMP1-204ENST00000587259 BLIDQ8IZY5 108 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 C12orf76Q8N812 135 aaPredicted RBP8.74□□□□□ -1.01
VMP1-204ENST00000587259 RNF169Q8NCN4 708 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 PPP2R3CQ969Q6 453 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 TCF25Q9BQ70 676 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 SDF4Q9BRK5 362 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 ANO3Q9BYT9 981 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 ENTPD7Q9NQZ7 604 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 RGS18Q9NS28 235 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 PCDHA7Q9UN72 937 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 KCNJ14Q9UNX9 436 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 PCDHB12Q9Y5F1 795 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 CLIC4Q9Y696 253 aa8.74□□□□□ -1.01
VMP1-204ENST00000587259 CCDC194A0A1B0GVG4 234 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 C2CD4DB7Z1M9 353 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms