RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	CCDC34	Q96HJ3	373 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	TRIM9	Q9C026	710 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	PARVG	Q9HBI0	331 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	POLD4	Q9HCU8	107 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	CHST12	Q9NRB3	414 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	SEL1L	Q9UBV2	794 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	MICAL3	Q7RTP6	2002 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	FRMD3	A2A2Y4	597 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	SFI1	A8K8P3	1242 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900		H0YCG3	227 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	GADD45B	O75293	160 aa	Predicted RBP	13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	TBCA	O75347	108 aa	Known RBP	13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	MAPT	P10636	758 aa	Known RBP	13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	GAP43	P17677	238 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	ABCD1	P33897	745 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	CACNB1	Q02641	598 aa	Predicted RBP	13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	MBTD1	Q05BQ5	628 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	NFX1	Q12986	1120 aa	Known RBP	13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	SNW1	Q13573	536 aa	Known RBP	13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	FAM187B	Q17R55	369 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	CHRDL2	Q6WN34	429 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	PPP4R3CP	Q6ZMV5	832 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	KRBA2	Q6ZNG9	492 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	OTOP2	Q7RTS6	562 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	DYM	Q7RTS9	669 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	SLC17A8	Q8NDX2	589 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	DEPTOR	Q8TB45	409 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	PRIMPOL	Q96LW4	560 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	TIGD1	Q96MW7	591 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	FZD8	Q9H461	694 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	TMEM134	Q9H6X4	195 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	MINDY3	Q9H8M7	445 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	KMT5A	Q9NQR1	393 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	ARHGAP28	Q9P2N2	729 aa		13.61	□□□□□ -0.23
PKN1-208	ENST00000586900	INO80B-WBP1	J3KQ70	363 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	TRAK2	O60296	914 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	PRPF40A	O75400	957 aa	Known RBP	13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	AXL	P30530	894 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	NCKAP1L	P55160	1127 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	NCBP1	Q09161	790 aa	Known RBP	13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	DSC3	Q14574	896 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	SHH	Q15465	462 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	AMHR2	Q16671	573 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	TCTN1	Q2MV58	587 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	C9orf50	Q5SZB4	431 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	CATSPER4	Q7RTX7	472 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	CCDC65	Q8IXS2	484 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	TDH	Q8IZJ6	230 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	MYCT1	Q8N699	235 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	CNNM3	Q8NE01	707 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	STAM	Q92783	540 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	PAGE5	Q96GU1	130 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	TRAIP	Q9BWF2	469 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	CCDC113	Q9H0I3	377 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	TMX1	Q9H3N1	280 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	ADGRA3	Q8IWK6	1321 aa		13.6	□□□□□ -0.23
PKN1-208	ENST00000586900	PVALEF	A0A1B0GWK0	134 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	CCDC169	A6NNP5	214 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	GOLGA6L22	H0YM25	854 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900		K7ERI5	159 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	ACKR2	O00590	384 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	ENPP3	O14638	875 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	GTPBP6	O43824	516 aa	Predicted RBP	13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	CSDE1	O75534	798 aa	Known RBP	13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	ERLIN2	O94905	339 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	ZSCAN20	P17040	1043 aa	Predicted RBP	13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	AFM	P43652	599 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	MAPK6	Q16659	721 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	TPRN	Q4KMQ1	711 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	UNC13D	Q70J99	1090 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	TMEM161B	Q8NDZ6	487 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	PHOSPHO2	Q8TCD6	241 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	FIZ1	Q96SL8	496 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	ST6GALNAC4	Q9H4F1	302 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	OLFML3	Q9NRN5	406 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	RGS18	Q9NS28	235 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	C1orf112	Q9NSG2	853 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	AGPAT5	Q9NUQ2	364 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	PANK4	Q9NVE7	773 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	RNF216	Q9NWF9	866 aa	Predicted RBP	13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	DACT1	Q9NYF0	836 aa		13.59	□□□□□ -0.23
PKN1-208	ENST00000586900	TTC3	P53804	2025 aa		13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	SLC16A4	O15374	487 aa		13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	TSPAN1	O60635	241 aa		13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	NR1I2	O75469	434 aa		13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	PRKCB	P05771	671 aa		13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	IDE	P14735	1019 aa		13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	LIG1	P18858	919 aa		13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	FGFR4	P22455	802 aa		13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	HOXA11	P31270	313 aa	Predicted RBP	13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	KCNJ6	P48051	423 aa		13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	WDR5	P61964	334 aa	Known RBP	13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	ASIC1	P78348	528 aa		13.58	□□□□□ -0.24
PKN1-208	ENST00000586900	FAM189B	P81408	668 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms