RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 PGBD4Q96DM1 585 aa17.09■□□□□ 0.33
MBD1-215ENST00000586884 IGSF21Q96ID5 467 aa17.09■□□□□ 0.33
MBD1-215ENST00000586884 NLRP4Q96MN2 994 aa17.09■□□□□ 0.33
MBD1-215ENST00000586884 POMKQ9H5K3 350 aa17.09■□□□□ 0.33
MBD1-215ENST00000586884 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
MBD1-215ENST00000586884 TBC1D13Q9NVG8 400 aa17.09■□□□□ 0.33
MBD1-215ENST00000586884 PPME1Q9Y570 386 aa17.09■□□□□ 0.33
MBD1-215ENST00000586884 WDR81Q562E7 1941 aa17.08■□□□□ 0.33
MBD1-215ENST00000586884 CTSAP10619 480 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 SP100P23497 879 aaPredicted RBP17.08■□□□□ 0.32
MBD1-215ENST00000586884 QARSP47897 775 aaKnown RBP17.08■□□□□ 0.32
MBD1-215ENST00000586884 TCF15Q12870 199 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 PPP2R5CQ13362 524 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 MTMR3Q13615 1198 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 TMEM173Q86WV6 379 aaPredicted RBP17.08■□□□□ 0.32
MBD1-215ENST00000586884 EXOC8Q8IYI6 725 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 KREMEN2Q8NCW0 462 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 SLC7A3Q8WY07 619 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 LPPQ93052 612 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 TM6SF1Q9BZW5 370 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 IRF2BPLQ9H1B7 796 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 CYP26B1Q9NR63 512 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 STK39Q9UEW8 545 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 CDH22Q9UJ99 828 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 SORCS3Q9UPU3 1222 aa17.08■□□□□ 0.32
MBD1-215ENST00000586884 C2CD4DB7Z1M9 353 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 SLC37A4O43826 429 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 OFD1O75665 1012 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 GALTP07902 379 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 AVPR2P30518 371 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 NUBP1P53384 320 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 VCPP55072 806 aaKnown RBP17.07■□□□□ 0.32
MBD1-215ENST00000586884 RNASELQ05823 741 aaKnown RBP17.07■□□□□ 0.32
MBD1-215ENST00000586884 INF2Q27J81 1249 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 PLA2G4FQ68DD2 849 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 KIAA1841Q6NSI8 718 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 KSR1Q8IVT5 923 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 URGCPQ8TCY9 931 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 FAM20AQ96MK3 541 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 NRDE2Q9H7Z3 1164 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 IFT122Q9HBG6 1241 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 KCNMB3Q9NPA1 279 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 AGPAT5Q9NUQ2 364 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 VAV3Q9UKW4 847 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 INPP5FQ9Y2H2 1132 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 COL4A3BPQ9Y5P4 624 aa17.07■□□□□ 0.32
MBD1-215ENST00000586884 EML1O00423 815 aa17.06■□□□□ 0.32
MBD1-215ENST00000586884 CDKL5O76039 1030 aa17.06■□□□□ 0.32
MBD1-215ENST00000586884 GCFC2P16383 781 aaKnown RBP17.06■□□□□ 0.32
MBD1-215ENST00000586884 LETM2Q2VYF4 491 aa17.06■□□□□ 0.32
MBD1-215ENST00000586884 LONRF3Q496Y0 759 aa17.06■□□□□ 0.32
MBD1-215ENST00000586884 ATAT1Q5SQI0 421 aa17.06■□□□□ 0.32
MBD1-215ENST00000586884 RARS2Q5T160 578 aaKnown RBP17.06■□□□□ 0.32
MBD1-215ENST00000586884 PPP4R3AQ6IN85 833 aa17.06■□□□□ 0.32
MBD1-215ENST00000586884 PPFIBP1Q86W92 1011 aa17.06■□□□□ 0.32
MBD1-215ENST00000586884 TDRD5Q8NAT2 981 aaKnown RBP17.06■□□□□ 0.32
MBD1-215ENST00000586884 AUTS2Q8WXX7 1259 aa17.06■□□□□ 0.32
MBD1-215ENST00000586884 AIFM3Q96NN9 605 aa17.06■□□□□ 0.32
MBD1-215ENST00000586884 PHOX2BQ99453 314 aa17.06■□□□□ 0.32
MBD1-215ENST00000586884 USTQ9Y2C2 406 aa17.06■□□□□ 0.32
MBD1-215ENST00000586884 PCDHB2Q9Y5E7 798 aa17.06■□□□□ 0.32
MBD1-215ENST00000586884 KMT2EQ8IZD2 1858 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 CNTNAP2Q9UHC6 1331 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 CCDC194A0A1B0GVG4 234 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 MEIS3P2A8K0S8 358 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 TBX3O15119 743 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 P4HBP07237 508 aaKnown RBP17.05■□□□□ 0.32
MBD1-215ENST00000586884 EPCAMP16422 314 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 RFC5P40937 340 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 SLC11A1P49279 550 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 STK3Q13188 491 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 SRGAP1Q7Z6B7 1085 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 MRPL10Q7Z7H8 261 aaKnown RBP17.05■□□□□ 0.32
MBD1-215ENST00000586884 NEK8Q86SG6 692 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 ZDHHC14Q8IZN3 488 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 PLCD3Q8N3E9 789 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 SLC22A17Q8WUG5 538 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 BCL7CQ8WUZ0 217 aaPredicted RBP17.05■□□□□ 0.32
MBD1-215ENST00000586884 PSPC1Q8WXF1 523 aaKnown RBP17.05■□□□□ 0.32
MBD1-215ENST00000586884 CEP170P1Q96L14 293 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 NAP1L4Q99733 375 aaKnown RBP17.05■□□□□ 0.32
MBD1-215ENST00000586884 PHF20Q9BVI0 1012 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 SLKQ9H2G2 1235 aaPredicted RBP17.05■□□□□ 0.32
MBD1-215ENST00000586884 DHX33Q9H6R0 707 aaKnown RBP17.05■□□□□ 0.32
MBD1-215ENST00000586884 DNAJB4Q9UDY4 337 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 DBR1Q9UK59 544 aaKnown RBP17.05■□□□□ 0.32
MBD1-215ENST00000586884 KCNJ14Q9UNX9 436 aa17.05■□□□□ 0.32
MBD1-215ENST00000586884 GAS2O43903 313 aaKnown RBP17.04■□□□□ 0.32
MBD1-215ENST00000586884 BRD1O95696 1058 aa17.04■□□□□ 0.32
MBD1-215ENST00000586884 XBP1P17861 261 aa17.04■□□□□ 0.32
MBD1-215ENST00000586884 NPEPPSP55786 919 aa17.04■□□□□ 0.32
MBD1-215ENST00000586884 PTPN14Q15678 1187 aa17.04■□□□□ 0.32
MBD1-215ENST00000586884 CABP7Q86V35 215 aa17.04■□□□□ 0.32
MBD1-215ENST00000586884 C4orf19Q8IY42 314 aa17.04■□□□□ 0.32
MBD1-215ENST00000586884 C12orf76Q8N812 135 aaPredicted RBP17.04■□□□□ 0.32
MBD1-215ENST00000586884 PRPF31Q8WWY3 499 aaKnown RBP17.04■□□□□ 0.32
MBD1-215ENST00000586884 LARP6Q9BRS8 491 aaKnown RBP17.04■□□□□ 0.32
MBD1-215ENST00000586884 TMEM175Q9BSA9 504 aa17.04■□□□□ 0.32
MBD1-215ENST00000586884 EMILIN2Q9BXX0 1053 aa17.04■□□□□ 0.32
MBD1-215ENST00000586884 GBP3Q9H0R5 595 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms