RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 USP38Q8NB14 1042 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 SPIRE2Q8WWL2 714 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 FOXD4L4Q8WXT5 416 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-204ENST00000586253 SCLYQ96I15 445 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 CCDC43Q96MW1 224 aaKnown RBP8.93□□□□□ -0.98
SMAD4-204ENST00000586253 MAP7D2Q96T17 732 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 UBE2OQ9C0C9 1292 aaKnown RBP8.93□□□□□ -0.98
SMAD4-204ENST00000586253 CCSER1Q9C0I3 900 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 FAM49AQ9H0Q0 323 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-204ENST00000586253 SCN5AQ14524 2016 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 SIP14410 1827 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 PP2D1A8MPX8 630 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 ZBTB39O15060 712 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 NBNO60934 754 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 CHRNA1P02708 482 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 MARCKSP29966 332 aaPredicted RBP8.92□□□□□ -0.98
SMAD4-204ENST00000586253 CDC25AP30304 524 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 UBA7P41226 1012 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 KRT85P78386 507 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 DNM1Q05193 864 aaKnown RBP8.92□□□□□ -0.98
SMAD4-204ENST00000586253 GRIN1Q05586 938 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 MBTPS1Q14703 1052 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 GPNMBQ14956 572 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 ECM1Q16610 540 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 TUSC1Q2TAM9 212 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 TMEM259Q4ZIN3 620 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 CABP7Q86V35 215 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 PIGOQ8TEQ8 1089 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 TCP11Q8WWU5 503 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 VWCEQ96DN2 955 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 ZBTB10Q96DT7 871 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 SUGCTQ9HAC7 445 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 ATP6V0A4Q9HBG4 840 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 DDX19AQ9NUU7 478 aaKnown RBP8.92□□□□□ -0.98
SMAD4-204ENST00000586253 TFIP11Q9UBB9 837 aaKnown RBP8.92□□□□□ -0.98
SMAD4-204ENST00000586253 KIAA1024Q9UPX6 916 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 DNM3Q9UQ16 869 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 AKT3Q9Y243 479 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 TRPV2Q9Y5S1 764 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 CDY2AQ9Y6F7 541 aa8.92□□□□□ -0.98
SMAD4-204ENST00000586253 RANBP2P49792 3224 aaKnown RBP8.92□□□□□ -0.98
SMAD4-204ENST00000586253 ARHGEF35A5YM69 484 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 EFCAB14O75071 495 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 GPR32O75388 356 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 BAIAP3O94812 1187 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 EYA4O95677 639 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 CTSHP09668 335 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 ACTN1P12814 892 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 TXLNAP40222 546 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 CLCN3P51790 818 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 CRYBB1P53674 252 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-204ENST00000586253 EPHB4P54760 987 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 EMC2Q15006 297 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 TMEM119Q4V9L6 283 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 PLEKHG4Q58EX7 1191 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 FBXO47Q5MNV8 452 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 TMEM240Q5SV17 173 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 RASIP1Q5U651 963 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 CNKSR3Q6P9H4 555 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 TSHZ1Q6ZSZ6 1077 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 C16orf59Q7L2K0 433 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 DEFB128Q7Z7B8 93 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 ZNF410Q86VK4 478 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 RETREG3Q86VR2 466 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 TDHQ8IZJ6 230 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 LRRC71Q8N4P6 559 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 MCPH1Q8NEM0 835 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 TET1Q8NFU7 2136 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 PSPC1Q8WXF1 523 aaKnown RBP8.91□□□□□ -0.98
SMAD4-204ENST00000586253 HERVK_113Q902F9 699 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 APBB2Q92870 758 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 CALML4Q96GE6 196 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 CDK5RAP3Q96JB5 506 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.91□□□□□ -0.98
SMAD4-204ENST00000586253 SH2D3AQ9BRG2 576 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 CELF4Q9BZC1 486 aaKnown RBP8.91□□□□□ -0.98
SMAD4-204ENST00000586253 SCAND2PQ9GZW5 306 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-204ENST00000586253 CSRNP2Q9H175 543 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 MTIF3Q9H2K0 278 aaKnown RBP8.91□□□□□ -0.98
SMAD4-204ENST00000586253 BHMT2Q9H2M3 363 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 ADAMTS10Q9H324 1103 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 KCND2Q9NZV8 630 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 SUCLA2Q9P2R7 463 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-204ENST00000586253 RCOR1Q9UKL0 485 aa8.91□□□□□ -0.98
SMAD4-204ENST00000586253 TCHHQ07283 1943 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 ABHD14A-ACY1A0A1B0GW23 586 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 ASAP2O43150 1006 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 CUTAO60888 179 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 FGBP02675 491 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 VTNP04004 478 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 ACRP10323 421 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 GHRP10912 638 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 CYP11B2P19099 503 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 GPC3P51654 580 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 NLRP11P59045 1033 aaKnown RBP8.9□□□□□ -0.98
SMAD4-204ENST00000586253 POU5F1BQ06416 359 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 TMEM62Q0P6H9 643 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 GRB10Q13322 594 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 DRP2Q13474 957 aa8.9□□□□□ -0.98
SMAD4-204ENST00000586253 MXD4Q14582 209 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms