RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 ASAP2O43150 1006 aa16.82■□□□□ 0.28
VAPA-209ENST00000585042 GAS2O43903 313 aaKnown RBP16.82■□□□□ 0.28
VAPA-209ENST00000585042 CSDE1O75534 798 aaKnown RBP16.82■□□□□ 0.28
VAPA-209ENST00000585042 P4HBP07237 508 aaKnown RBP16.82■□□□□ 0.28
VAPA-209ENST00000585042 PBX3P40426 434 aa16.82■□□□□ 0.28
VAPA-209ENST00000585042 MRE11P49959 708 aa16.82■□□□□ 0.28
VAPA-209ENST00000585042 PTPN21Q16825 1174 aa16.82■□□□□ 0.28
VAPA-209ENST00000585042 NOMO2Q5JPE7 1267 aa16.82■□□□□ 0.28
VAPA-209ENST00000585042 SRGAP1Q7Z6B7 1085 aa16.82■□□□□ 0.28
VAPA-209ENST00000585042 SLC7A3Q8WY07 619 aa16.82■□□□□ 0.28
VAPA-209ENST00000585042 PDRG1Q9NUG6 133 aa16.82■□□□□ 0.28
VAPA-209ENST00000585042 FAM105AQ9NUU6 356 aa16.82■□□□□ 0.28
VAPA-209ENST00000585042 HCFC2Q9Y5Z7 792 aa16.82■□□□□ 0.28
VAPA-209ENST00000585042 CCDC194A0A1B0GVG4 234 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 CLASP2O75122 1294 aaKnown RBP16.81■□□□□ 0.28
VAPA-209ENST00000585042 RFC5P40937 340 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 MTHFRP42898 656 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 NUBP1P53384 320 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 INF2Q27J81 1249 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 LETM2Q2VYF4 491 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 LLGL2Q6P1M3 1020 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 OTUD6AQ7L8S5 288 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 CATSPER4Q7RTX7 472 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 MRPL10Q7Z7H8 261 aaKnown RBP16.81■□□□□ 0.28
VAPA-209ENST00000585042 NEK8Q86SG6 692 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 C4orf19Q8IY42 314 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 VPS52Q8N1B4 723 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 IGSF21Q96ID5 467 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 RIPOR3Q96MK2 946 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 DHX33Q9H6R0 707 aaKnown RBP16.81■□□□□ 0.28
VAPA-209ENST00000585042 IFT122Q9HBG6 1241 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 DZANK1Q9NVP4 752 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 KANSL3Q9P2N6 904 aa16.81■□□□□ 0.28
VAPA-209ENST00000585042 PIN4Q9Y237 131 aaKnown RBP16.81■□□□□ 0.28
VAPA-209ENST00000585042 WDFY4Q6ZS81 3184 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 STK36Q9NRP7 1315 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 TMEM150BA6NC51 233 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 EML1O00423 815 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 OFD1O75665 1012 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 GALTP07902 379 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 CTSAP10619 480 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 PTPN5P54829 565 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 PCBP1Q15365 356 aaKnown RBP eCLIP16.8■□□□□ 0.28
VAPA-209ENST00000585042 EPHA7Q15375 998 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 PPFIBP1Q86W92 1011 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 TMEM87AQ8NBN3 555 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 TCP11Q8WWU5 503 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 ASIC4Q96FT7 647 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 SH2D3AQ9BRG2 576 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 ZBP1Q9H171 429 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 IRF2BPLQ9H1B7 796 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 SLKQ9H2G2 1235 aaPredicted RBP16.8■□□□□ 0.28
VAPA-209ENST00000585042 NRDE2Q9H7Z3 1164 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 AGPAT5Q9NUQ2 364 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 TBC1D13Q9NVG8 400 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 VAV3Q9UKW4 847 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 COL4A3BPQ9Y5P4 624 aa16.8■□□□□ 0.28
VAPA-209ENST00000585042 NT5C1B-RDH14C9J2C7 533 aa16.79■□□□□ 0.28
VAPA-209ENST00000585042 SLC37A4O43826 429 aa16.79■□□□□ 0.28
VAPA-209ENST00000585042 ZC3H11AO75152 810 aaKnown RBP eCLIP16.79■□□□□ 0.28
VAPA-209ENST00000585042 RNASELQ05823 741 aaKnown RBP16.79■□□□□ 0.28
VAPA-209ENST00000585042 STK3Q13188 491 aa16.79■□□□□ 0.28
VAPA-209ENST00000585042 SLFN12Q8IYM2 578 aa16.79■□□□□ 0.28
VAPA-209ENST00000585042 UBALD2Q8IYN6 164 aa16.79■□□□□ 0.28
VAPA-209ENST00000585042 CNNM3Q8NE01 707 aa16.79■□□□□ 0.28
VAPA-209ENST00000585042 PRPF31Q8WWY3 499 aaKnown RBP16.79■□□□□ 0.28
VAPA-209ENST00000585042 PSPC1Q8WXF1 523 aaKnown RBP16.79■□□□□ 0.28
VAPA-209ENST00000585042 CEP170P1Q96L14 293 aa16.79■□□□□ 0.28
VAPA-209ENST00000585042 NLRP4Q96MN2 994 aa16.79■□□□□ 0.28
VAPA-209ENST00000585042 AIFM3Q96NN9 605 aa16.79■□□□□ 0.28
VAPA-209ENST00000585042 UBN1Q9NPG3 1134 aa16.79■□□□□ 0.28
VAPA-209ENST00000585042 KCNJ14Q9UNX9 436 aa16.79■□□□□ 0.28
VAPA-209ENST00000585042 PCDHB2Q9Y5E7 798 aa16.79■□□□□ 0.28
VAPA-209ENST00000585042 CNTNAP2Q9UHC6 1331 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 PFKFB2O60825 505 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 BAG4O95429 457 aaKnown RBP16.78■□□□□ 0.28
VAPA-209ENST00000585042 ALDH2P05091 517 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 NPEPPSP55786 919 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 POU5F1BQ06416 359 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 ATAT1Q5SQI0 421 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 KSR1Q8IVT5 923 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 PLCD3Q8N3E9 789 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 URGCPQ8TCY9 931 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 WASF1Q92558 559 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 HAS1Q92839 578 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 LARP6Q9BRS8 491 aaKnown RBP16.78■□□□□ 0.28
VAPA-209ENST00000585042 TMEM175Q9BSA9 504 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 ZSWIM4Q9H7M6 989 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 USTQ9Y2C2 406 aa16.78■□□□□ 0.28
VAPA-209ENST00000585042 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.77■□□□□ 0.28
VAPA-209ENST00000585042 MARCH6O60337 910 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 CCNT1O60563 726 aaKnown RBP16.77■□□□□ 0.28
VAPA-209ENST00000585042 AXLP30530 894 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 HOXA11P31270 313 aaPredicted RBP16.77■□□□□ 0.28
VAPA-209ENST00000585042 LAMTOR4Q0VGL1 99 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 SCRN1Q12765 414 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 ANKRD1Q15327 319 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 PLA2G4FQ68DD2 849 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 KIAA1841Q6NSI8 718 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 AGMOQ6ZNB7 445 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms