RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 C14orf93Q9H972 538 aaKnown RBP4.35□□□□□ -1.71
VAPA-208ENST00000584796 CABP5Q9NP86 173 aa4.35□□□□□ -1.71
VAPA-208ENST00000584796 B4GALT6Q9UBX8 382 aa4.35□□□□□ -1.71
VAPA-208ENST00000584796 DNAI1Q9UI46 699 aa4.35□□□□□ -1.71
VAPA-208ENST00000584796 RCAN3Q9UKA8 241 aa4.35□□□□□ -1.71
VAPA-208ENST00000584796 TNPO3Q9Y5L0 923 aaKnown RBP4.35□□□□□ -1.71
VAPA-208ENST00000584796 A0A0A6YYJ9 748 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 GOLGA6L6A8MZA4 724 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 CBX4O00257 560 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 RPS6KA4O75676 772 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 IPO13O94829 963 aaKnown RBP4.34□□□□□ -1.71
VAPA-208ENST00000584796 HNRNPLP14866 589 aaKnown RBP eCLIP4.34□□□□□ -1.714e-7■□□□□ 10.3
VAPA-208ENST00000584796 KIR2DL3P43628 341 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 ADCY1Q08828 1119 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 SPIDRQ14159 915 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 ZNF174Q15697 407 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 KRT40Q6A162 431 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 LAIR1Q6GTX8 287 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 CMTM4Q8IZR5 234 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 ATXN2LQ8WWM7 1075 aaKnown RBP4.34□□□□□ -1.71
VAPA-208ENST00000584796 HAS1Q92839 578 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 OSBPL6Q9BZF3 934 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 FANCD2Q9BXW9 1451 aa4.34□□□□□ -1.71
VAPA-208ENST00000584796 KIF13AQ9H1H9 1805 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 CADPSQ9ULU8 1353 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 A0A0A6YYK5 440 aaPredicted RBP4.33□□□□□ -1.72
VAPA-208ENST00000584796 DAPK3O43293 454 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 OPA1O60313 960 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 FAM20BO75063 409 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 MFAP3LO75121 409 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 PROZP22891 400 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 RANGAP1P46060 587 aaPredicted RBP4.33□□□□□ -1.72
VAPA-208ENST00000584796 DCAF17Q5H9S7 520 aaPredicted RBP4.33□□□□□ -1.72
VAPA-208ENST00000584796 PIK3R6Q5UE93 754 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 CYB5RLQ6IPT4 315 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 PHYKPLQ8IUZ5 450 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 ZNF276Q8N554 614 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 MB21D1Q8N884 522 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 ST8SIA2Q92186 375 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 CRAMP1Q96RY5 1269 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 ELF4Q99607 663 aaPredicted RBP4.33□□□□□ -1.72
VAPA-208ENST00000584796 SOX7Q9BT81 388 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 MTG2Q9H4K7 406 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 SPO11Q9Y5K1 396 aa4.33□□□□□ -1.72
VAPA-208ENST00000584796 PCSK5Q92824 1860 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 MAFGO15525 162 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 OPHN1O60890 802 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 PPFIA2O75334 1257 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 SLC9A1P19634 815 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 NR4A1P22736 598 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 ADRA1BP35368 520 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 NPEPPSP55786 919 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 ADCY2Q08462 1091 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 SQSTM1Q13501 440 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 MAN2A1Q16706 1144 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 KIAA1841Q6NSI8 718 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 APBB1IPQ7Z5R6 666 aaPredicted RBP4.32□□□□□ -1.72
VAPA-208ENST00000584796 C7orf31Q8N865 590 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 PPP1R14CQ8TAE6 165 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 PMFBP1Q8TBY8 1022 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 ARL8AQ96BM9 186 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 PGBD4Q96DM1 585 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 ORAI3Q9BRQ5 295 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 ENKD1Q9H0I2 346 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 OSBPL2Q9H1P3 480 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 SYNPO2Q9UMS6 1093 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 FZD1Q9UP38 647 aa4.32□□□□□ -1.72
VAPA-208ENST00000584796 STC2O76061 302 aa4.31□□□□□ -1.72
VAPA-208ENST00000584796 PRPF6O94906 941 aaKnown RBP4.31□□□□□ -1.72
VAPA-208ENST00000584796 ITGB1P05556 798 aa4.31□□□□□ -1.72
VAPA-208ENST00000584796 SDSP20132 328 aa4.31□□□□□ -1.72
VAPA-208ENST00000584796 MBNL2Q5VZF2 373 aaKnown RBP4.31□□□□□ -1.72
VAPA-208ENST00000584796 TIGD7Q6NT04 549 aaPredicted RBP4.31□□□□□ -1.72
VAPA-208ENST00000584796 UNQ6494/PRO21346Q6UXR6 183 aa4.31□□□□□ -1.72
VAPA-208ENST00000584796 LRRC55Q6ZSA7 311 aa4.31□□□□□ -1.72
VAPA-208ENST00000584796 MYL10Q9BUA6 226 aa4.31□□□□□ -1.72
VAPA-208ENST00000584796 MLST8Q9BVC4 326 aa4.31□□□□□ -1.72
VAPA-208ENST00000584796 POFUT1Q9H488 388 aa4.31□□□□□ -1.72
VAPA-208ENST00000584796 ZMAT4Q9H898 229 aa4.31□□□□□ -1.72
VAPA-208ENST00000584796 HS3ST4Q9Y661 456 aa4.31□□□□□ -1.72
VAPA-208ENST00000584796 TARBP1Q13395 1621 aaKnown RBP4.31□□□□□ -1.72
VAPA-208ENST00000584796 NRP1O14786 923 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 PPFIA4O75335 1185 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 RFPL3O75679 317 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 FSBPO95073 299 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 GCP02774 474 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 JMJD7P0C870 316 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 GAAP10253 952 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 GNAT2P19087 354 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 FLT3P36888 993 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 FSTL1Q12841 308 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 SF3A1Q15459 793 aaKnown RBP4.3□□□□□ -1.72
VAPA-208ENST00000584796 METTL24Q5JXM2 366 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 CDCA2Q69YH5 1023 aaPredicted RBP4.3□□□□□ -1.72
VAPA-208ENST00000584796 UBE2R2Q712K3 238 aaPredicted RBP4.3□□□□□ -1.72
VAPA-208ENST00000584796 ZZZ3Q8IYH5 903 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 UNC5BQ8IZJ1 945 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 SYNE4Q8N205 404 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 RTF1Q92541 710 aaKnown RBP4.3□□□□□ -1.72
VAPA-208ENST00000584796 UIMC1Q96RL1 719 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms