RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 KRT32Q14532 448 aa15.03■□□□□ -0
COPS3-218ENST00000584216 XKR3Q5GH77 459 aa15.03■□□□□ -0
COPS3-218ENST00000584216 KANK3Q6NY19 840 aa15.03■□□□□ -0
COPS3-218ENST00000584216 ZC3H14Q6PJT7 736 aaKnown RBP15.03■□□□□ -0
COPS3-218ENST00000584216 CCDC148Q8NFR7 591 aa15.03■□□□□ -0
COPS3-218ENST00000584216 CMASQ8NFW8 434 aaPredicted RBP15.03■□□□□ -0
COPS3-218ENST00000584216 NXPE3Q969Y0 559 aa15.03■□□□□ -0
COPS3-218ENST00000584216 KLHL5Q96PQ7 755 aa15.03■□□□□ -0
COPS3-218ENST00000584216 FAM193BQ96PV7 902 aaPredicted RBP15.03■□□□□ -0
COPS3-218ENST00000584216 TEKT3Q9BXF9 490 aa15.03■□□□□ -0
COPS3-218ENST00000584216 GBP3Q9H0R5 595 aa15.03■□□□□ -0
COPS3-218ENST00000584216 KANSL3Q9P2N6 904 aa15.03■□□□□ -0
COPS3-218ENST00000584216 SEPT9Q9UHD8 586 aaPredicted RBP15.03■□□□□ -0
COPS3-218ENST00000584216 BRPF3Q9ULD4 1205 aa15.03■□□□□ -0
COPS3-218ENST00000584216 NAP1L2Q9ULW6 460 aaPredicted RBP15.03■□□□□ -0
COPS3-218ENST00000584216 CHMP2AO43633 222 aa15.02■□□□□ -0
COPS3-218ENST00000584216 PI15O43692 258 aa15.02■□□□□ -0
COPS3-218ENST00000584216 CSDE1O75534 798 aaKnown RBP15.02■□□□□ -0
COPS3-218ENST00000584216 OFD1O75665 1012 aa15.02■□□□□ -0
COPS3-218ENST00000584216 EXOSC10Q01780 885 aaKnown RBP15.02■□□□□ -0
COPS3-218ENST00000584216 AKAP17AQ02040 695 aaKnown RBP15.02■□□□□ -0
COPS3-218ENST00000584216 TARBP2Q15633 366 aaKnown RBP15.02■□□□□ -0
COPS3-218ENST00000584216 LRCH2Q5VUJ6 765 aa15.02■□□□□ -0
COPS3-218ENST00000584216 CATSPER4Q7RTX7 472 aa15.02■□□□□ -0
COPS3-218ENST00000584216 LPPQ93052 612 aa15.02■□□□□ -0
COPS3-218ENST00000584216 LENG9Q96B70 501 aa15.02■□□□□ -0
COPS3-218ENST00000584216 TMEM175Q9BSA9 504 aa15.02■□□□□ -0
COPS3-218ENST00000584216 NIFKQ9BYG3 293 aaKnown RBP15.02■□□□□ -0
COPS3-218ENST00000584216 RHOBTB2Q9BYZ6 727 aa15.02■□□□□ -0
COPS3-218ENST00000584216 CNTNAP2Q9UHC6 1331 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 A0A087WZ62 844 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 ALDH2P05091 517 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 URODP06132 367 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 ADH1AP07327 375 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 CNPP09543 421 aaKnown RBP15.01□□□□□ -0.01
COPS3-218ENST00000584216 CDC27P30260 824 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 SLC11A1P49279 550 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 USP11P51784 963 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 MTERF2Q49AM1 385 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 RHPN2Q8IUC4 686 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 BCL7CQ8WUZ0 217 aaPredicted RBP15.01□□□□□ -0.01
COPS3-218ENST00000584216 CCDC136Q96JN2 1154 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 FDXACB1Q9BRP7 624 aaPredicted RBP15.01□□□□□ -0.01
COPS3-218ENST00000584216 FAM217BQ9NTX9 383 aaPredicted RBP15.01□□□□□ -0.01
COPS3-218ENST00000584216 SUCLA2Q9P2R7 463 aaPredicted RBP15.01□□□□□ -0.01
COPS3-218ENST00000584216 DNAJB4Q9UDY4 337 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 DMDP11532 3685 aa15.01□□□□□ -0.01
COPS3-218ENST00000584216 IGKV6-21A0A0C4DH24 114 aa15□□□□□ -0.01
COPS3-218ENST00000584216 MSH4O15457 936 aa15□□□□□ -0.01
COPS3-218ENST00000584216 GBP2P32456 591 aaPredicted RBP15□□□□□ -0.01
COPS3-218ENST00000584216 UGCGQ16739 394 aa15□□□□□ -0.01
COPS3-218ENST00000584216 LONRF3Q496Y0 759 aa15□□□□□ -0.01
COPS3-218ENST00000584216 MIER3Q7Z3K6 550 aa15□□□□□ -0.01
COPS3-218ENST00000584216 EXOC8Q8IYI6 725 aa15□□□□□ -0.01
COPS3-218ENST00000584216 SLC5A5Q92911 643 aa15□□□□□ -0.01
COPS3-218ENST00000584216 NLRP4Q96MN2 994 aa15□□□□□ -0.01
COPS3-218ENST00000584216 TCEANC2Q96MN5 208 aa15□□□□□ -0.01
COPS3-218ENST00000584216 C22orf23Q9BZE7 217 aa15□□□□□ -0.01
COPS3-218ENST00000584216 UNC45AQ9H3U1 944 aa15□□□□□ -0.01
COPS3-218ENST00000584216 RSAD1Q9HA92 442 aa15□□□□□ -0.01
COPS3-218ENST00000584216 WDR6Q9NNW5 1121 aaKnown RBP15□□□□□ -0.01
COPS3-218ENST00000584216 UBN1Q9NPG3 1134 aa15□□□□□ -0.01
COPS3-218ENST00000584216 MAN1C1Q9NR34 630 aa15□□□□□ -0.01
COPS3-218ENST00000584216 EPS15L1Q9UBC2 864 aa15□□□□□ -0.01
COPS3-218ENST00000584216 FAN1Q9Y2M0 1017 aa15□□□□□ -0.01
COPS3-218ENST00000584216 PCDHB2Q9Y5E7 798 aa15□□□□□ -0.01
COPS3-218ENST00000584216 EVPLQ92817 2033 aa15□□□□□ -0.01
COPS3-218ENST00000584216 FAM186AA6NE01 2351 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 CLUHO75153 1309 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 RIF1Q5UIP0 2472 aaKnown RBP14.99□□□□□ -0.01
COPS3-218ENST00000584216 PRPF3O43395 683 aaKnown RBP14.99□□□□□ -0.01
COPS3-218ENST00000584216 GLUD1P00367 558 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 SOD2P04179 222 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 SSBP05455 408 aaKnown RBP eCLIP14.99□□□□□ -0.01
COPS3-218ENST00000584216 CFHP08603 1231 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 SRFP11831 508 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 ADD1P35611 737 aaKnown RBP14.99□□□□□ -0.01
COPS3-218ENST00000584216 AK2P54819 239 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 DRP2Q13474 957 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 TSGA10IPQ3SY00 556 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 DGLUCYQ7Z3D6 616 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 HINFPQ9BQA5 517 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 VN1R3Q9BXE9 311 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 AGPAT5Q9NUQ2 364 aa14.99□□□□□ -0.01
COPS3-218ENST00000584216 CCDC195A0A1B0GUA6 201 aa14.98□□□□□ -0.01
COPS3-218ENST00000584216 LILRB3O75022 631 aa14.98□□□□□ -0.01
COPS3-218ENST00000584216 MAFO75444 373 aaPredicted RBP14.98□□□□□ -0.01
COPS3-218ENST00000584216 NR1I2O75469 434 aa14.98□□□□□ -0.01
COPS3-218ENST00000584216 C1RP00736 705 aa14.98□□□□□ -0.01
COPS3-218ENST00000584216 PUM1Q14671 1186 aaKnown RBP eCLIP14.98□□□□□ -0.01
COPS3-218ENST00000584216 PHLDB3Q6NSJ2 640 aa14.98□□□□□ -0.01
COPS3-218ENST00000584216 ZNF280BQ86YH2 543 aa14.98□□□□□ -0.01
COPS3-218ENST00000584216 CNNM3Q8NE01 707 aa14.98□□□□□ -0.01
COPS3-218ENST00000584216 HDAC7Q8WUI4 952 aa14.98□□□□□ -0.01
COPS3-218ENST00000584216 SLC7A3Q8WY07 619 aa14.98□□□□□ -0.01
COPS3-218ENST00000584216 RPS6KC1Q96S38 1066 aa14.98□□□□□ -0.01
COPS3-218ENST00000584216 HERC2P3Q9BVR0 1158 aa14.98□□□□□ -0.01
COPS3-218ENST00000584216 TBC1D17Q9HA65 648 aa14.98□□□□□ -0.01
COPS3-218ENST00000584216 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.98□□□□□ -0.01
COPS3-218ENST00000584216 SPTBN4Q9H254 2564 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms