RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 CCDC195A0A1B0GUA6 201 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 CTSAP10619 480 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 SRFP11831 508 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 SLC11A1P49279 550 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 AFF1P51825 1210 aaKnown RBP12.96□□□□□ -0.33
NUP85-224ENST00000583948 CRYBB1P53674 252 aaPredicted RBP12.96□□□□□ -0.33
NUP85-224ENST00000583948 ANTXR2P58335 489 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 GPC5P78333 572 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 ME3Q16798 604 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 CCDC178Q5BJE1 867 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 ZNF280BQ86YH2 543 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 RAB11FIP4Q86YS3 637 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 CCDC60Q8IWA6 550 aaPredicted RBP12.96□□□□□ -0.33
NUP85-224ENST00000583948 LRRC71Q8N4P6 559 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 NECAB1Q8N987 351 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 BBXQ8WY36 941 aaPredicted RBP12.96□□□□□ -0.33
NUP85-224ENST00000583948 JADE2Q9NQC1 790 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 CHMP5Q9NZZ3 219 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 IGSF9Q9P2J2 1179 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 INPP5FQ9Y2H2 1132 aa12.96□□□□□ -0.33
NUP85-224ENST00000583948 FAM208BQ5VWN6 2430 aa12.96□□□□□ -0.34
NUP85-224ENST00000583948 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.95□□□□□ -0.34
NUP85-224ENST00000583948 ALDH7A1P49419 539 aaKnown RBP12.95□□□□□ -0.34
NUP85-224ENST00000583948 NLRP11P59045 1033 aaKnown RBP12.95□□□□□ -0.34
NUP85-224ENST00000583948 GET4Q7L5D6 327 aaPredicted RBP12.95□□□□□ -0.34
NUP85-224ENST00000583948 ZNF598Q86UK7 904 aaKnown RBP12.95□□□□□ -0.34
NUP85-224ENST00000583948 IGSF21Q96ID5 467 aa12.95□□□□□ -0.34
NUP85-224ENST00000583948 MAN1C1Q9NR34 630 aa12.95□□□□□ -0.34
NUP85-224ENST00000583948 KCNH7Q9NS40 1196 aa12.95□□□□□ -0.34
NUP85-224ENST00000583948 NUMBLQ9Y6R0 609 aa12.95□□□□□ -0.34
NUP85-224ENST00000583948 CEP295Q9C0D2 2601 aa12.95□□□□□ -0.34
NUP85-224ENST00000583948 NBEAQ8NFP9 2946 aa12.95□□□□□ -0.34
NUP85-224ENST00000583948 SETXQ7Z333 2677 aaKnown RBP12.95□□□□□ -0.34
NUP85-224ENST00000583948 F8W810 466 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 BACH1O14867 736 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 IFIT3O14879 490 aaKnown RBP12.94□□□□□ -0.34
NUP85-224ENST00000583948 PLEKHA8P1O95397 391 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 C22orf31O95567 290 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 GALTP07902 379 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 HOXC13P31276 330 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 UBXN2BQ14CS0 331 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 PHLDB3Q6NSJ2 640 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 NFXL1Q6ZNB6 911 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 PLPPR4Q7Z2D5 763 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 DDX53Q86TM3 631 aaKnown RBP12.94□□□□□ -0.34
NUP85-224ENST00000583948 GLYCTKQ8IVS8 523 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 CUL5Q93034 780 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 INTS4Q96HW7 963 aaKnown RBP12.94□□□□□ -0.34
NUP85-224ENST00000583948 RTKNQ9BST9 563 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 ADAMTS10Q9H324 1103 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
NUP85-224ENST00000583948 PCDHA6Q9UN73 950 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.94□□□□□ -0.34
NUP85-224ENST00000583948 PCDHA8Q9Y5H6 950 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 WDFY3Q8IZQ1 3526 aa12.94□□□□□ -0.34
NUP85-224ENST00000583948 CLUHO75153 1309 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 KLF18A0A0U1RQI7 1052 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 ERICH2A1L162 156 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 SH2B2O14492 632 aaPredicted RBP12.93□□□□□ -0.34
NUP85-224ENST00000583948 INPPL1O15357 1258 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 LAMTOR5O43504 91 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 DDHD2O94830 711 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 RXRAP19793 462 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 DDIT3P35638 169 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 NTHL1P78549 312 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 TROAPQ12815 778 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 SART3Q15020 963 aaKnown RBP12.93□□□□□ -0.34
NUP85-224ENST00000583948 SWSAP1Q6NVH7 229 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 PARM1Q6UWI2 310 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 ATRIPQ8WXE1 791 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 FGF14Q92915 247 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 ZNF707Q96C28 371 aaPredicted RBP12.93□□□□□ -0.34
NUP85-224ENST00000583948 TMEM87BQ96K49 555 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 B3GALT6Q96L58 329 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 WDR6Q9NNW5 1121 aaKnown RBP12.93□□□□□ -0.34
NUP85-224ENST00000583948 TBC1D13Q9NVG8 400 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 SMC3Q9UQE7 1217 aa12.93□□□□□ -0.34
NUP85-224ENST00000583948 CNOT1A5YKK6 2376 aaKnown RBP12.93□□□□□ -0.34
NUP85-224ENST00000583948 FAM170BA6NMN3 283 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 GOLGA8BA8MQT2 603 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 PIK3CDO00329 1044 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 LILRB3O75022 631 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 ZIC2O95409 532 aaPredicted RBP12.92□□□□□ -0.34
NUP85-224ENST00000583948 ZSCAN20P17040 1043 aaPredicted RBP12.92□□□□□ -0.34
NUP85-224ENST00000583948 LMNB2Q03252 620 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 ST3GAL1Q11201 340 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 HTR4Q13639 388 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 N4BP2L1Q5TBK1 243 aaPredicted RBP12.92□□□□□ -0.34
NUP85-224ENST00000583948 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 ABHD15Q6UXT9 468 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 CCDC82Q8N4S0 544 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 SMG7Q92540 1137 aaKnown RBP12.92□□□□□ -0.34
NUP85-224ENST00000583948 GTF3C6Q969F1 213 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 MXRA8Q9BRK3 442 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 AGXT2Q9BYV1 514 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 PSTPIP2Q9H939 334 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 AGO4Q9HCK5 861 aaKnown RBP12.92□□□□□ -0.34
NUP85-224ENST00000583948 EPS15L1Q9UBC2 864 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 AKT3Q9Y243 479 aa12.92□□□□□ -0.34
NUP85-224ENST00000583948 IRAK3Q9Y616 596 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 342.9 ms