RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 C11orf57Q6ZUT1 292 aaPredicted RBP10.13□□□□□ -0.79
CASC3-209ENST00000583902 SRGAP1Q7Z6B7 1085 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 USP37Q86T82 979 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 TRIM50Q86XT4 487 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 TMEM161BQ8NDZ6 487 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 DEPTORQ8TB45 409 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 SCFD1Q8WVM8 642 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 FIZ1Q96SL8 496 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 MKNK1Q9BUB5 465 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 GRPEL1Q9HAV7 217 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 METTL14Q9HCE5 456 aaKnown RBP10.13□□□□□ -0.79
CASC3-209ENST00000583902 KIAA1586Q9HCI6 787 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 TBC1D7Q9P0N9 293 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 SUCLA2Q9P2R7 463 aaPredicted RBP10.13□□□□□ -0.79
CASC3-209ENST00000583902 MAGEC2Q9UBF1 373 aaPredicted RBP10.13□□□□□ -0.79
CASC3-209ENST00000583902 GTF2IRD1Q9UHL9 959 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 OGDHLQ9ULD0 1010 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 GDAQ9Y2T3 454 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 SQORQ9Y6N5 450 aa10.13□□□□□ -0.79
CASC3-209ENST00000583902 A0A087WWV3 80 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 NPHP3-ACAD11A0A0J9YXS1 232 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 LRRC10BA6NIK2 292 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 CCDC169A6NNP5 214 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 K7ERI5 159 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 M0QZ92 97 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 CETN3O15182 167 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 SLC16A3O15427 465 aaKnown RBP10.12□□□□□ -0.79
CASC3-209ENST00000583902 CBFA2T2O43439 604 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 LDHAP00338 332 aaKnown RBP10.12□□□□□ -0.79
CASC3-209ENST00000583902 PGK1P00558 417 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 PIGRP01833 764 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 GJB1P08034 283 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 GLRA2P23416 452 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 ACLYP53396 1101 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 PEX3P56589 373 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 PTENP60484 403 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 BEX3Q00994 111 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 NCBP1Q09161 790 aaKnown RBP10.12□□□□□ -0.79
CASC3-209ENST00000583902 RAD51AP2Q09MP3 1159 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 LAMTOR4Q0VGL1 99 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 TRIM32Q13049 653 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 MAPK6Q16659 721 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 KYAT1Q16773 422 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 ZPBP2Q6X784 338 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 FILIP1Q7Z7B0 1213 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 MAP4K3Q8IVH8 894 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 DHX40Q8IX18 779 aaKnown RBP10.12□□□□□ -0.79
CASC3-209ENST00000583902 ZC3H3Q8IXZ2 948 aaKnown RBP10.12□□□□□ -0.79
CASC3-209ENST00000583902 SYCP3Q8IZU3 236 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 CSGALNACT2Q8N6G5 542 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 METTL13Q8N6R0 699 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 LMBR1Q8WVP7 490 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 KCTD10Q9H3F6 313 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 SUGCTQ9HAC7 445 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 TBX20Q9UMR3 447 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 TELO2Q9Y4R8 837 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 SIP14410 1827 aa10.12□□□□□ -0.79
CASC3-209ENST00000583902 RSPH10B2B2RC85 870 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 PARNO95453 639 aaKnown RBP10.11□□□□□ -0.79
CASC3-209ENST00000583902 RSPH10BP0C881 870 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 HSPA1AP0DMV8 641 aaKnown RBP10.11□□□□□ -0.79
CASC3-209ENST00000583902 HSPA1BP0DMV9 641 aaKnown RBP10.11□□□□□ -0.79
CASC3-209ENST00000583902 CYP2C9P11712 490 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 CCL5P13501 91 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 CDK11BP21127 795 aaKnown RBP10.11□□□□□ -0.79
CASC3-209ENST00000583902 GARTP22102 1010 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 AXLP30530 894 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 MARSP56192 900 aaKnown RBP10.11□□□□□ -0.79
CASC3-209ENST00000583902 ITGA7Q13683 1181 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 NCAPHQ15003 741 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 NBPF20Q3BBV1 942 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 FILIP1LQ4L180 1135 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 ZCWPW2Q504Y3 356 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 MARCH8Q5T0T0 291 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 C1orf53Q5VUE5 145 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 SMYD5Q6GMV2 418 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 ISM2Q6H9L7 571 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 KLHL10Q6JEL2 608 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 TTI2Q6NXR4 508 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 CXCL17Q6UXB2 119 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 GAS2L3Q86XJ1 694 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 CCDC155Q8N6L0 562 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 USP38Q8NB14 1042 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 SLC43A3Q8NBI5 491 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 PRPF31Q8WWY3 499 aaKnown RBP10.11□□□□□ -0.79
CASC3-209ENST00000583902 TMEM143Q96AN5 459 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 ZNF333Q96JL9 665 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 MRPL4Q9BYD3 311 aaKnown RBP10.11□□□□□ -0.79
CASC3-209ENST00000583902 GCOM2Q9BZD3 368 aaPredicted RBP10.11□□□□□ -0.79
CASC3-209ENST00000583902 CRISPLD2Q9H0B8 497 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 RNF208Q9H0X6 261 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 RBSNQ9H1K0 784 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 PRMT7Q9NVM4 692 aaPredicted RBP10.11□□□□□ -0.79
CASC3-209ENST00000583902 HDAC6Q9UBN7 1215 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 CTNND2Q9UQB3 1225 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 FRMD4BQ9Y2L6 1034 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 NFE2L3Q9Y4A8 694 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.11□□□□□ -0.79
CASC3-209ENST00000583902 STYXL1Q9Y6J8 313 aa10.11□□□□□ -0.79
CASC3-209ENST00000583902 TRIP12Q14669 1992 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms