RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 SESN3P58005 492 aa5.08□□□□□ -1.6
VAPA-206ENST00000583475 TRIM25Q14258 630 aaKnown RBP5.08□□□□□ -1.6
VAPA-206ENST00000583475 STAT4Q14765 748 aa5.08□□□□□ -1.6
VAPA-206ENST00000583475 ZXDCQ2QGD7 858 aaPredicted RBP5.08□□□□□ -1.6
VAPA-206ENST00000583475 GAGE13Q4V321 117 aa5.08□□□□□ -1.6
VAPA-206ENST00000583475 CT83Q5H943 113 aa5.08□□□□□ -1.6
VAPA-206ENST00000583475 CT47A1Q5JQC4 288 aaPredicted RBP5.08□□□□□ -1.6
VAPA-206ENST00000583475 PIK3C3Q8NEB9 887 aa5.08□□□□□ -1.6
VAPA-206ENST00000583475 EDAQ92838 391 aa5.08□□□□□ -1.6
VAPA-206ENST00000583475 FAM126AQ9BYI3 521 aaPredicted RBP5.08□□□□□ -1.6
VAPA-206ENST00000583475 WNT8AQ9H1J5 351 aa5.08□□□□□ -1.6
VAPA-206ENST00000583475 VTA1Q9NP79 307 aa5.08□□□□□ -1.6
VAPA-206ENST00000583475 PRSS50Q9UI38 385 aa5.08□□□□□ -1.6
VAPA-206ENST00000583475 APOBEC2Q9Y235 224 aaKnown RBP5.08□□□□□ -1.6
VAPA-206ENST00000583475 MYRFQ9Y2G1 1151 aa5.08□□□□□ -1.6
VAPA-206ENST00000583475 ST20-MTHFSA0A0A6YYL1 179 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 A0A1W2PRX2 142 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 GOLGA8BA8MQT2 603 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 PLSCR1O15162 318 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 VSIG10L2P0DP72 767 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 ACO1P21399 889 aaKnown RBP5.07□□□□□ -1.6
VAPA-206ENST00000583475 MSX2P35548 267 aaPredicted RBP5.07□□□□□ -1.6
VAPA-206ENST00000583475 GPR15P49685 360 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 HS1BP3Q53T59 392 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 PITRM1Q5JRX3 1037 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 CCDC62Q6P9F0 684 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 DBX2Q6ZNG2 339 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 GAREM2Q75VX8 874 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 HDGFL2Q7Z4V5 671 aaPredicted RBP5.07□□□□□ -1.6
VAPA-206ENST00000583475 PALM2Q8IXS6 379 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 CMIPQ8IY22 773 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 RSAD2Q8WXG1 361 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 TMEM176AQ96HP8 235 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 ADOQ96SZ5 270 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 CDK5RAP1Q96SZ6 601 aaKnown RBP5.07□□□□□ -1.6
VAPA-206ENST00000583475 TMX1Q9H3N1 280 aa5.07□□□□□ -1.6
VAPA-206ENST00000583475 EVLQ9UI08 416 aaPredicted RBP5.07□□□□□ -1.6
VAPA-206ENST00000583475 UBE2QL1A1L167 161 aa5.06□□□□□ -1.6
VAPA-206ENST00000583475 MUSKO15146 869 aa5.06□□□□□ -1.6
VAPA-206ENST00000583475 LY86O95711 162 aa5.06□□□□□ -1.6
VAPA-206ENST00000583475 JUNP05412 331 aaKnown RBP5.06□□□□□ -1.6
VAPA-206ENST00000583475 CNGA1P29973 690 aa5.06□□□□□ -1.6
VAPA-206ENST00000583475 CCDC178Q5BJE1 867 aa5.06□□□□□ -1.6
VAPA-206ENST00000583475 SPTY2D1Q68D10 685 aaPredicted RBP5.06□□□□□ -1.6
VAPA-206ENST00000583475 ZNF808Q8N4W9 903 aaPredicted RBP5.06□□□□□ -1.6
VAPA-206ENST00000583475 EAF2Q96CJ1 260 aaPredicted RBP5.06□□□□□ -1.6
VAPA-206ENST00000583475 UIMC1Q96RL1 719 aa5.06□□□□□ -1.6
VAPA-206ENST00000583475 C14orf93Q9H972 538 aaKnown RBP5.06□□□□□ -1.6
VAPA-206ENST00000583475 ING3Q9NXR8 418 aa5.06□□□□□ -1.6
VAPA-206ENST00000583475 HECAQ9UBI9 543 aaPredicted RBP5.06□□□□□ -1.6
VAPA-206ENST00000583475 SH3BP1Q9Y3L3 701 aa5.06□□□□□ -1.6
VAPA-206ENST00000583475 A0A1W2PR48 441 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 GPR39O43194 453 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 LPLP06858 475 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 CPEP16870 476 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 LGALS4P56470 323 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 PUM1Q14671 1186 aaKnown RBP eCLIP5.05□□□□□ -1.63e-12■□□□□ 8.6
VAPA-206ENST00000583475 PRKD1Q15139 912 aaPredicted RBP5.05□□□□□ -1.6
VAPA-206ENST00000583475 FSCN1Q16658 493 aaKnown RBP5.05□□□□□ -1.6
VAPA-206ENST00000583475 SPDYAQ5MJ70 313 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 FAM111BQ6SJ93 734 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 TAS1R1Q7RTX1 841 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 SPRED1Q7Z699 444 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 UNC5BQ8IZJ1 945 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 CMTM4Q8IZR5 234 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 D2HGDHQ8N465 521 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 WDR66Q8TBY9 1149 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 SH3RF3Q8TEJ3 882 aaPredicted RBP5.05□□□□□ -1.6
VAPA-206ENST00000583475 LMBR1Q8WVP7 490 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 MPHOSPH9Q99550 1183 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 KRTAP4-5Q9BYR2 181 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 SPC25Q9HBM1 224 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 IL23AQ9NPF7 189 aa5.05□□□□□ -1.6
VAPA-206ENST00000583475 PHLDB1Q86UU1 1377 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 GOLGA8AA7E2F4 631 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 MTSS1O43312 755 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 NRP2O60462 931 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 ALDH1A2O94788 518 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 ENPP1P22413 925 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 XPAP23025 273 aaPredicted RBP5.04□□□□□ -1.6
VAPA-206ENST00000583475 TMPRSS15P98073 1019 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 PPARAQ07869 468 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 MGAT5Q09328 741 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 UGT8Q16880 541 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 KRT40Q6A162 431 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 IQSEC1Q6DN90 963 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 ZNF662Q6ZS27 426 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 SGMS1Q86VZ5 419 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 OR14C36Q8NHC7 312 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 FAM89AQ96GI7 184 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 BORCS6Q96GS4 357 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 ACAP3Q96P50 834 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 ORAI2Q96SN7 254 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 TCF25Q9BQ70 676 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 ENKD1Q9H0I2 346 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 KCTD10Q9H3F6 313 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.04□□□□□ -1.6
VAPA-206ENST00000583475 CDY2AQ9Y6F7 541 aa5.04□□□□□ -1.6
VAPA-206ENST00000583475 MATN3O15232 486 aa5.03□□□□□ -1.6
VAPA-206ENST00000583475 DNAJC6O75061 913 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms