RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 FAM105AQ9NUU6 356 aa13.86□□□□□ -0.19
TOP3A-215ENST00000583328 DNAJB4Q9UDY4 337 aa13.86□□□□□ -0.19
TOP3A-215ENST00000583328 BRPF3Q9ULD4 1205 aa13.86□□□□□ -0.19
TOP3A-215ENST00000583328 CA14Q9ULX7 337 aa13.86□□□□□ -0.19
TOP3A-215ENST00000583328 PIN4Q9Y237 131 aaKnown RBP13.86□□□□□ -0.19
TOP3A-215ENST00000583328 A0A087WZ62 844 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 KRBA1A5PL33 1030 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 MEIS3P2A8K0S8 358 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 ALDH2P05091 517 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 DNM2P50570 870 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 DRP2Q13474 957 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 PUM1Q14671 1186 aaKnown RBP eCLIP13.85□□□□□ -0.19
TOP3A-215ENST00000583328 NECTIN1Q15223 517 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 SPECC1Q5M775 1068 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 ZNF280BQ86YH2 543 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 URGCPQ8TCY9 931 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 STAMQ92783 540 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 PGBD4Q96DM1 585 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 FAM193BQ96PV7 902 aaPredicted RBP13.85□□□□□ -0.19
TOP3A-215ENST00000583328 FDXACB1Q9BRP7 624 aaPredicted RBP13.85□□□□□ -0.19
TOP3A-215ENST00000583328 VN1R3Q9BXE9 311 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 C6orf50Q9HD87 102 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 MRPL17Q9NRX2 175 aaKnown RBP13.85□□□□□ -0.19
TOP3A-215ENST00000583328 NAP1L2Q9ULW6 460 aaPredicted RBP13.85□□□□□ -0.19
TOP3A-215ENST00000583328 FAN1Q9Y2M0 1017 aa13.85□□□□□ -0.19
TOP3A-215ENST00000583328 CCDC195A0A1B0GUA6 201 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 C2CD2LO14523 706 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 CHMP2AO43633 222 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 LILRB3O75022 631 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 ZNF623O75123 536 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 CIITAP33076 1130 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 RAB27AP51159 221 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 AK2P54819 239 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 UGCGQ16739 394 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 PFKFB3Q16875 520 aaPredicted RBP13.84□□□□□ -0.19
TOP3A-215ENST00000583328 MTERF2Q49AM1 385 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 ELMSAN1Q6PJG2 1045 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 ZC3H14Q6PJT7 736 aaKnown RBP13.84□□□□□ -0.19
TOP3A-215ENST00000583328 CATSPER4Q7RTX7 472 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 REXO1Q8N1G1 1221 aaKnown RBP13.84□□□□□ -0.19
TOP3A-215ENST00000583328 SLC44A3Q8N4M1 653 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 CMASQ8NFW8 434 aaPredicted RBP13.84□□□□□ -0.19
TOP3A-215ENST00000583328 TCEANC2Q96MN5 208 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 ZMYND12Q9H0C1 365 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 TBC1D17Q9HA65 648 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 WDR6Q9NNW5 1121 aaKnown RBP13.84□□□□□ -0.19
TOP3A-215ENST00000583328 MAN1C1Q9NR34 630 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 DMDP11532 3685 aa13.84□□□□□ -0.19
TOP3A-215ENST00000583328 ESYT2A0FGR8 921 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 ADAMTS3O15072 1205 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 GAS7O60861 476 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 N4BP1O75113 896 aaKnown RBP13.83□□□□□ -0.2
TOP3A-215ENST00000583328 DDHD2O94830 711 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 DCNP07585 359 aaKnown RBP13.83□□□□□ -0.2
TOP3A-215ENST00000583328 MYBP10242 640 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 SRFP11831 508 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 GNA11P29992 359 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 CDC27P30260 824 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 SFNP31947 248 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 JAK3P52333 1124 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 TARBP2Q15633 366 aaKnown RBP13.83□□□□□ -0.2
TOP3A-215ENST00000583328 CYP26C1Q6V0L0 522 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 ZNF410Q86VK4 478 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 SKAP1Q86WV1 359 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 RHPN2Q8IUC4 686 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 CCDC12Q8WUD4 166 aaPredicted RBP13.83□□□□□ -0.2
TOP3A-215ENST00000583328 NXPE3Q969Y0 559 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 TEKT3Q9BXF9 490 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 ANO2Q9NQ90 1003 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 FAM217BQ9NTX9 383 aaPredicted RBP13.83□□□□□ -0.2
TOP3A-215ENST00000583328 SUCLA2Q9P2R7 463 aaPredicted RBP13.83□□□□□ -0.2
TOP3A-215ENST00000583328 EPS15L1Q9UBC2 864 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 SEPT9Q9UHD8 586 aaPredicted RBP13.83□□□□□ -0.2
TOP3A-215ENST00000583328 DPP7Q9UHL4 492 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 SSX2IPQ9Y2D8 614 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 SIT1Q9Y3P8 196 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 CACNA1AO00555 2505 aa13.83□□□□□ -0.2
TOP3A-215ENST00000583328 KLF18A0A0U1RQI7 1052 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 NRP1O14786 923 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 INPPL1O15357 1258 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 MSH4O15457 936 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 B4GALT3O60512 393 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 SOD2P04179 222 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 URODP06132 367 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 ADH1AP07327 375 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 SP9P0CG40 484 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 ADD1P35611 737 aaKnown RBP13.82□□□□□ -0.2
TOP3A-215ENST00000583328 EXOSC10Q01780 885 aaKnown RBP13.82□□□□□ -0.2
TOP3A-215ENST00000583328 XKR3Q5GH77 459 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 RNF20Q5VTR2 975 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 DHX32Q7L7V1 743 aaKnown RBP13.82□□□□□ -0.2
TOP3A-215ENST00000583328 MIER3Q7Z3K6 550 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 C1orf210Q8IVY1 113 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 DCLK2Q8N568 766 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 SMG7Q92540 1137 aaKnown RBP13.82□□□□□ -0.2
TOP3A-215ENST00000583328 RUBCNQ92622 972 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 LENG9Q96B70 501 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 NLRP4Q96MN2 994 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 MYADMQ96S97 322 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 RIT2Q99578 217 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms